FHIR Genomics Implementation Guide

Notice

Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.

ValueSets

The ValueSets created specifically for use in Genomics are listed below. Some of the ValueSets listed may still be in draft and pending further changes once requirements for the GMS have been finalised.

ValueSets

ValueSet Genomics Additional InfoType

Usage
ValueSet to specify reference to additional details of the input`s use as part of the task execution or the output generated from task completion.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem AdditionalInfoTypeGenomics

Table View

ValueSet.id[0]	genomics-additional-infotype
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-additional-infotype
ValueSet.version[0]	0.1.0
ValueSet.name[0]	GenomicsAdditionalInfoType
ValueSet.title[0]	Genomics Additional Information Type
ValueSet.status[0]	draft
ValueSet.date[0]	2024-05-31T00:00:00.000Z
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	ValueSet to specify reference to additional details of the input`s use as part of the task execution or the output generated from task completion.
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/additional-infotype-genomics
ValueSet.compose[0].include[0].version[0]	0.1.0

XML View

<id value="genomics-additional-infotype" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-additional-infotype" />
<version value="0.1.0" />
<name value="GenomicsAdditionalInfoType" />
<title value="Genomics Additional Information Type" />
<status value="draft" />
<date value="2024-05-31T00:00:00.000Z" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="ValueSet to specify reference to additional details of the input`s use as part of the task execution or the output generated from task completion." />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/additional-infotype-genomics" />
<version value="0.1.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-additional-infotype",
"url": "https://fhir.nhs.uk/ValueSet/genomics-additional-infotype",
"version": "0.1.0",
"name": "GenomicsAdditionalInfoType",
"title": "Genomics Additional Information Type",
"status": "draft",
"date": "2024-05-31T00:00:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "ValueSet to specify reference to additional details of the input`s use as part of the task execution or the output generated from task completion.",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/additional-infotype-genomics",
"version": "0.1.0"
}
]
}

}

Propose a change to ValueSet Genomics Additional InfoType

ValueSet Genomics Business Status

Usage
A ValueSet to identify the business status for a Genomic Test Order filler Task

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem BusinessStatusGenomics

Table View

ValueSet.id[0]	genomics-business-status
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-business-status
ValueSet.version[0]	0.1.2
ValueSet.name[0]	GenomicsBusinessStatus
ValueSet.title[0]	Genomics Business Status
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the business status for a Genomic Test Order filler Task
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/business-status-genomics
ValueSet.compose[0].include[0].version[0]	0.4.1

XML View

<id value="genomics-business-status" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-business-status" />
<version value="0.1.2" />
<name value="GenomicsBusinessStatus" />
<title value="Genomics Business Status" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the business status for a Genomic Test Order filler Task" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/business-status-genomics" />
<version value="0.4.1" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-business-status",
"url": "https://fhir.nhs.uk/ValueSet/genomics-business-status",
"version": "0.1.2",
"name": "GenomicsBusinessStatus",
"title": "Genomics Business Status",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the business status for a Genomic Test Order filler Task",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/business-status-genomics",
"version": "0.4.1"
}
]
}

}

Propose a change to ValueSet Genomics Business Status

ValueSet Genomics Task Code

Usage
A ValueSet to identify the type of Task for Genomic Order Management

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem TaskCodeGenomics

Table View

ValueSet.id[0]	genomics-task-code
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-task-code
ValueSet.version[0]	0.2.1
ValueSet.name[0]	GenomicsTaskCode
ValueSet.title[0]	Genomics Task Code
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the type of Task for Genomic Order Management
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/task-code-genomics
ValueSet.compose[0].include[0].version[0]	0.3.0

XML View

<id value="genomics-task-code" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-task-code" />
<version value="0.2.1" />
<name value="GenomicsTaskCode" />
<title value="Genomics Task Code" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the type of Task for Genomic Order Management" />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/task-code-genomics" />
<version value="0.3.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-task-code",
"url": "https://fhir.nhs.uk/ValueSet/genomics-task-code",
"version": "0.2.1",
"name": "GenomicsTaskCode",
"title": "Genomics Task Code",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the type of Task for Genomic Order Management",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/task-code-genomics",
"version": "0.3.0"
}
]
}

}

Propose a change to ValueSet Genomics Task Code

ValueSet Genomics Task Status Reason

Usage
A ValueSet to identify the reasons for failure states of Tasks for Genomic Order Management

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem TaskStatusReasonGenomics

Table View

ValueSet.id[0]	genomics-task-statusReason
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-task-statusReason
ValueSet.version[0]	0.2.2
ValueSet.name[0]	GenomicsTaskStatusReason
ValueSet.title[0]	Genomics Task Status Reason
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the reasons for failure states of Tasks for Genomic Order Management
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics
ValueSet.compose[0].include[0].version[0]	0.3.1

XML View

<id value="genomics-task-statusReason" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-task-statusReason" />
<version value="0.2.2" />
<name value="GenomicsTaskStatusReason" />
<title value="Genomics Task Status Reason" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the reasons for failure states of Tasks for Genomic Order Management" />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics" />
<version value="0.3.1" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-task-statusReason",
"url": "https://fhir.nhs.uk/ValueSet/genomics-task-statusReason",
"version": "0.2.2",
"name": "GenomicsTaskStatusReason",
"title": "Genomics Task Status Reason",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the reasons for failure states of Tasks for Genomic Order Management",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics",
"version": "0.3.1"
}
]
}

}

Propose a change to ValueSet Genomics Task Status Reason

ValueSet Genomic Coverage

Usage

A set of codes that define the funding category.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem UKCoreFundingCategory

Expansion

This expansion was generated on 2024-09-30T12:46:49+00:00

This value set contains 10 concepts

Code	System	Display
public	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Public
nhs-england	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	NHS England
nhs-scotland	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	NHS Scotland
nhs-wales	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	NHS Wales
hsc-northern-ireland	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	HSC Northern Ireland
jersey	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Jersey
guernsey	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Guernsey
isle-of-man	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Isle of Man
overseas-visitor	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Overseas Visitor
private	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory	Private

Table View

ValueSet.id[0]	UKCore-FundingCategory
ValueSet.url[0]	https://fhir.hl7.org.uk/ValueSet/UKCore-FundingCategory
ValueSet.version[0]	1.0.0
ValueSet.name[0]	UKCoreFundingCategory
ValueSet.title[0]	UK Core Funding Category
ValueSet.status[0]	active
ValueSet.date[0]	2023-04-28
ValueSet.publisher[0]	HL7 UK
ValueSet.contact[0].name[0]	HL7 UK
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	ukcore@hl7.org.uk
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A set of codes that define the funding category.
ValueSet.copyright[0]	Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].identifier[0]	b641d39a-e7c1-43f3-95a7-f88f3196b968
ValueSet.expansion[0].timestamp[0]	2024-09-30T12:46:49+00:00
ValueSet.expansion[0].total[0]	10
ValueSet.expansion[0].contains[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[0].code[0]	public
ValueSet.expansion[0].contains[0].display[0]	Public
ValueSet.expansion[0].contains[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[1].code[0]	nhs-england
ValueSet.expansion[0].contains[1].display[0]	NHS England
ValueSet.expansion[0].contains[2].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[2].code[0]	nhs-scotland
ValueSet.expansion[0].contains[2].display[0]	NHS Scotland
ValueSet.expansion[0].contains[3].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[3].code[0]	nhs-wales
ValueSet.expansion[0].contains[3].display[0]	NHS Wales
ValueSet.expansion[0].contains[4].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[4].code[0]	hsc-northern-ireland
ValueSet.expansion[0].contains[4].display[0]	HSC Northern Ireland
ValueSet.expansion[0].contains[5].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[5].code[0]	jersey
ValueSet.expansion[0].contains[5].display[0]	Jersey
ValueSet.expansion[0].contains[6].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[6].code[0]	guernsey
ValueSet.expansion[0].contains[6].display[0]	Guernsey
ValueSet.expansion[0].contains[7].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[7].code[0]	isle-of-man
ValueSet.expansion[0].contains[7].display[0]	Isle of Man
ValueSet.expansion[0].contains[8].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[8].code[0]	overseas-visitor
ValueSet.expansion[0].contains[8].display[0]	Overseas Visitor
ValueSet.expansion[0].contains[9].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory
ValueSet.expansion[0].contains[9].code[0]	private
ValueSet.expansion[0].contains[9].display[0]	Private

XML View

<id value="UKCore-FundingCategory" />
<url value="https://fhir.hl7.org.uk/ValueSet/UKCore-FundingCategory" />
<version value="1.0.0" />
<name value="UKCoreFundingCategory" />
<title value="UK Core Funding Category" />
<status value="active" />
<date value="2023-04-28" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes that define the funding category." />
<copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
</include>
</compose>
<expansion>
<identifier value="b641d39a-e7c1-43f3-95a7-f88f3196b968" />
<timestamp value="2024-09-30T12:46:49+00:00" />
<total value="10" />
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="public" />
<display value="Public" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="nhs-england" />
<display value="NHS England" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="nhs-scotland" />
<display value="NHS Scotland" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="nhs-wales" />
<display value="NHS Wales" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="hsc-northern-ireland" />
<display value="HSC Northern Ireland" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="jersey" />
<display value="Jersey" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="guernsey" />
<display value="Guernsey" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="isle-of-man" />
<display value="Isle of Man" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="overseas-visitor" />
<display value="Overseas Visitor" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="private" />
<display value="Private" />
</contains>
</expansion>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "UKCore-FundingCategory",
"url": "https://fhir.hl7.org.uk/ValueSet/UKCore-FundingCategory",
"version": "1.0.0",
"name": "UKCoreFundingCategory",
"title": "UK Core Funding Category",
"status": "active",
"date": "2023-04-28",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "A set of codes that define the funding category.",
"copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory"
}
]
},
"expansion": {
"identifier": "b641d39a-e7c1-43f3-95a7-f88f3196b968",
"timestamp": "2024-09-30T12:46:49+00:00",
"total": 10,
"contains": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "public",
"display": "Public"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "nhs-england",
"display": "NHS England"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "nhs-scotland",
"display": "NHS Scotland"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "nhs-wales",
"display": "NHS Wales"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "hsc-northern-ireland",
"display": "HSC Northern Ireland"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "jersey",
"display": "Jersey"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "guernsey",
"display": "Guernsey"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "isle-of-man",
"display": "Isle of Man"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "overseas-visitor",
"display": "Overseas Visitor"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "private",
"display": "Private"
}
]
}

}

Propose a change to ValueSet Genomic Coverage

ValueSet Genomic-Message-Events

Usage
A ValueSet to identify the type of Genomics Message

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem MessageEventsGenomics

Table View

ValueSet.id[0]	genomics-message-events
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-message-events
ValueSet.version[0]	0.1.1
ValueSet.name[0]	GenomicsMessageEvents
ValueSet.title[0]	Genomics Message Events
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the type of Genomics Message
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/message-events-genomics
ValueSet.compose[0].include[0].version[0]	0.2.0

XML View

<id value="genomics-message-events" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-message-events" />
<version value="0.1.1" />
<name value="GenomicsMessageEvents" />
<title value="Genomics Message Events" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the type of Genomics Message" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/message-events-genomics" />
<version value="0.2.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-message-events",
"url": "https://fhir.nhs.uk/ValueSet/genomics-message-events",
"version": "0.1.1",
"name": "GenomicsMessageEvents",
"title": "Genomics Message Events",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the type of Genomics Message",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/message-events-genomics",
"version": "0.2.0"
}
]
}

}

Propose a change to ValueSet Genomic Message Events

ValueSet Genomic-NHSNumber-Unavailable-Reason

Usage

A set of codes that define the reason why a patient does not have an NHS Number.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem UKCoreNHSNumberUnavailableReason
Import all codes from CodeSystem UKCoreWithheldIdentityReason

Expansion

This expansion was generated on 2023-03-29T15:09:15+00:00

This value set contains 8 concepts

Code	System	Display
nhs-number-not-known	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason	NHS number not known
overseas-patient	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason	Overseas patient
devolved-nation	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason	Devolved nation
01	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason	Record anonymised for legal/statutory reasons
02	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason	Record anonymised at request of Caldicott Guardian
03	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason	Record anonymised at request of Patient
97	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason	Record anonymised for other reason
99	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason	Identity withheld but reason not known

Table View

ValueSet.id[0]	UKCore-NHSNumberUnavailableReason
ValueSet.url[0]	https://fhir.hl7.org.uk/ValueSet/UKCore-NHSNumberUnavailableReason
ValueSet.version[0]	1.1.0
ValueSet.name[0]	UKCoreNHSNumberUnavailableReason
ValueSet.title[0]	UK Core NHS Number Unavailable Reason
ValueSet.status[0]	active
ValueSet.date[0]	2024-06-14
ValueSet.publisher[0]	HL7 UK
ValueSet.contact[0].name[0]	HL7 UK
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	ukcore@hl7.org.uk
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A set of codes that define the reason why a patient does not have an NHS Number.
ValueSet.copyright[0]	Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason
ValueSet.compose[0].include[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].identifier[0]	a130430a-9572-4a68-9952-87907c3c2915
ValueSet.expansion[0].timestamp[0]	2023-03-29T15:09:15+00:00
ValueSet.expansion[0].total[0]	8
ValueSet.expansion[0].offset[0]	0
ValueSet.expansion[0].contains[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason
ValueSet.expansion[0].contains[0].code[0]	nhs-number-not-known
ValueSet.expansion[0].contains[0].display[0]	NHS number not known
ValueSet.expansion[0].contains[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason
ValueSet.expansion[0].contains[1].code[0]	overseas-patient
ValueSet.expansion[0].contains[1].display[0]	Overseas patient
ValueSet.expansion[0].contains[2].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason
ValueSet.expansion[0].contains[2].code[0]	devolved-nation
ValueSet.expansion[0].contains[2].display[0]	Devolved nation
ValueSet.expansion[0].contains[3].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].contains[3].code[0]	01
ValueSet.expansion[0].contains[3].display[0]	Record anonymised for legal/statutory reasons
ValueSet.expansion[0].contains[4].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].contains[4].code[0]	02
ValueSet.expansion[0].contains[4].display[0]	Record anonymised at request of Caldicott Guardian
ValueSet.expansion[0].contains[5].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].contains[5].code[0]	03
ValueSet.expansion[0].contains[5].display[0]	Record anonymised at request of Patient
ValueSet.expansion[0].contains[6].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].contains[6].code[0]	97
ValueSet.expansion[0].contains[6].display[0]	Record anonymised for other reason
ValueSet.expansion[0].contains[7].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason
ValueSet.expansion[0].contains[7].code[0]	99
ValueSet.expansion[0].contains[7].display[0]	Identity withheld but reason not known

XML View

<id value="UKCore-NHSNumberUnavailableReason" />
<url value="https://fhir.hl7.org.uk/ValueSet/UKCore-NHSNumberUnavailableReason" />
<version value="1.1.0" />
<name value="UKCoreNHSNumberUnavailableReason" />
<title value="UK Core NHS Number Unavailable Reason" />
<status value="active" />
<date value="2024-06-14" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes that define the reason why a patient does not have an NHS Number." />
<copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason" />
</include>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
</include>
</compose>
<expansion>
<identifier value="a130430a-9572-4a68-9952-87907c3c2915" />
<timestamp value="2023-03-29T15:09:15+00:00" />
<total value="8" />
<offset value="0" />
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason" />
<code value="nhs-number-not-known" />
<display value="NHS number not known" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason" />
<code value="overseas-patient" />
<display value="Overseas patient" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason" />
<code value="devolved-nation" />
<display value="Devolved nation" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
<code value="01" />
<display value="Record anonymised for legal/statutory reasons" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
<code value="02" />
<display value="Record anonymised at request of Caldicott Guardian" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
<code value="03" />
<display value="Record anonymised at request of Patient" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
<code value="97" />
<display value="Record anonymised for other reason" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason" />
<code value="99" />
<display value="Identity withheld but reason not known" />
</contains>
</expansion>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "UKCore-NHSNumberUnavailableReason",
"url": "https://fhir.hl7.org.uk/ValueSet/UKCore-NHSNumberUnavailableReason",
"version": "1.1.0",
"name": "UKCoreNHSNumberUnavailableReason",
"title": "UK Core NHS Number Unavailable Reason",
"status": "active",
"date": "2024-06-14",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "A set of codes that define the reason why a patient does not have an NHS Number.",
"copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason"
}
]
},
"expansion": {
"identifier": "a130430a-9572-4a68-9952-87907c3c2915",
"timestamp": "2023-03-29T15:09:15+00:00",
"total": 8,
"offset": 0,
"contains": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason",
"code": "nhs-number-not-known",
"display": "NHS number not known"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason",
"code": "overseas-patient",
"display": "Overseas patient"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-NHSNumberUnavailableReason",
"code": "devolved-nation",
"display": "Devolved nation"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason",
"code": "01",
"display": "Record anonymised for legal/statutory reasons"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason",
"code": "02",
"display": "Record anonymised at request of Caldicott Guardian"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason",
"code": "03",
"display": "Record anonymised at request of Patient"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason",
"code": "97",
"display": "Record anonymised for other reason"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-WithheldIdentityReason",
"code": "99",
"display": "Identity withheld but reason not known"
}
]
}

}

Propose a change to ValueSet Genomic Coverage

ValueSet Genomic Patient ChoiceCategory

Usage
A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem PatientChoiceCategoryGenomics

Table View

ValueSet.id[0]	genomics-patient-choice-category
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-patient-choice-category
ValueSet.version[0]	0.1.1
ValueSet.name[0]	GenomicsPatientChoiceCategory
ValueSet.title[0]	Genomics Patient Choice Category
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics
ValueSet.compose[0].include[0].version[0]	0.2.0

XML View

<id value="genomics-patient-choice-category" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-patient-choice-category" />
<version value="0.1.1" />
<name value="GenomicsPatientChoiceCategory" />
<title value="Genomics Patient Choice Category" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics" />
<version value="0.2.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-patient-choice-category",
"url": "https://fhir.nhs.uk/ValueSet/genomics-patient-choice-category",
"version": "0.1.1",
"name": "GenomicsPatientChoiceCategory",
"title": "Genomics Patient Choice Category",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics",
"version": "0.2.0"
}
]
}

}

Propose a change to ValueSet Genomic Patient Choice Category

ValueSet Genomic Patient Research Choice

Usage
A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem PatientChoiceResearchParticipation

Table View

ValueSet.id[0]	genomics-patient-choice-researchparticipation
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-patient-choice-researchparticipation
ValueSet.version[0]	0.1.1
ValueSet.name[0]	GenomicsPatientChoiceResearchParticipation
ValueSet.title[0]	Genomics Patient Choice Research Participation
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/patient-choice-researchparticipation
ValueSet.compose[0].include[0].version[0]	0.2.0

XML View

<id value="genomics-patient-choice-researchparticipation" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-patient-choice-researchparticipation" />
<version value="0.1.1" />
<name value="GenomicsPatientChoiceResearchParticipation" />
<title value="Genomics Patient Choice Research Participation" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/patient-choice-researchparticipation" />
<version value="0.2.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-patient-choice-researchparticipation",
"url": "https://fhir.nhs.uk/ValueSet/genomics-patient-choice-researchparticipation",
"version": "0.1.1",
"name": "GenomicsPatientChoiceResearchParticipation",
"title": "Genomics Patient Choice Research Participation",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the categories of sources of obtaining the patient choice (consent) before undergoing Genomic test",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-choice-researchparticipation",
"version": "0.2.0"
}
]
}

}

Propose a change to ValueSet Genomic Patient Research Choice

ValueSet Genomic Patient Guardian Types

Usage
A ValueSet to identify the category of patient guardian types

HTML View

This value set includes codes from the following code systems:

The following codes from system: v3.RoleCode
Code Display
PRN Parent
GUARD Guardian
The following codes from system: PatientConsulteeGenomics
Code Display
consultee Consultee

Code	Display
PRN	Parent
GUARD	Guardian

Code	Display
consultee	Consultee

Table View

ValueSet.id[0]	genomics-patientguardian-types
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-patientguardian-types
ValueSet.version[0]	0.1.1
ValueSet.name[0]	GenomicsPatientGuardian
ValueSet.title[0]	Genomics Patient Guardian
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the category of patient guardian types
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	http://terminology.hl7.org/CodeSystem/v3-RoleCode
ValueSet.compose[0].include[0].concept[0].code[0]	PRN
ValueSet.compose[0].include[0].concept[0].display[0]	Parent
ValueSet.compose[0].include[0].concept[1].code[0]	GUARD
ValueSet.compose[0].include[0].concept[1].display[0]	Guardian
ValueSet.compose[0].include[1].system[0]	https://fhir.nhs.uk/CodeSystem/patient-consultee-genomics
ValueSet.compose[0].include[1].version[0]	0.2.0
ValueSet.compose[0].include[1].concept[0].code[0]	consultee
ValueSet.compose[0].include[1].concept[0].display[0]	Consultee

XML View

<id value="genomics-patientguardian-types" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-patientguardian-types" />
<version value="0.1.1" />
<name value="GenomicsPatientGuardian" />
<title value="Genomics Patient Guardian" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the category of patient guardian types" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="http://terminology.hl7.org/CodeSystem/v3-RoleCode" />
<concept>
<code value="PRN" />
<display value="Parent" />
</concept>
<concept>
<code value="GUARD" />
<display value="Guardian" />
</concept>
</include>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/patient-consultee-genomics" />
<version value="0.2.0" />
<concept>
<code value="consultee" />
<display value="Consultee" />
</concept>
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-patientguardian-types",
"url": "https://fhir.nhs.uk/ValueSet/genomics-patientguardian-types",
"version": "0.1.1",
"name": "GenomicsPatientGuardian",
"title": "Genomics Patient Guardian",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the category of patient guardian types",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "http://terminology.hl7.org/CodeSystem/v3-RoleCode",
"concept": [
{
"code": "PRN",
"display": "Parent"
},
{
"code": "GUARD",
"display": "Guardian"
}
]
},
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-consultee-genomics",
"version": "0.2.0",
"concept": [
{
"code": "consultee",
"display": "Consultee"
}
]
}
]
}

}

Propose a change to ValueSet Genomic Patient Guardian Types

ValueSet Genomic Patient Role

Usage
A ValueSet used to identify the role of the subject patient in the genomic test (proband vs consultand)

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem PatientRoleGenomics

Expansion

This expansion was generated on 2025-12-18T00:00:00Z

This value set contains 2 concepts

Code	System	Display
proband	https://fhir.nhs.uk/CodeSystem/patient-role-genomics	Proband
consultand	https://fhir.nhs.uk/CodeSystem/patient-role-genomics	Consultand

Table View

ValueSet.id[0]	genomics-patient-role
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-patient-role
ValueSet.version[0]	0.1.0
ValueSet.name[0]	GenomicsPatientRole
ValueSet.title[0]	Genomics Patient Role
ValueSet.status[0]	draft
ValueSet.date[0]	2025-12-18T00:00:00.000Z
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A ValueSet used to identify the role of the subject patient in the genomic test (proband vs consultand)
ValueSet.copyright[0]	Copyright © 2025+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/patient-role-genomics
ValueSet.compose[0].include[0].version[0]	0.1.0
ValueSet.expansion[0].timestamp[0]	2025-12-18T00:00:00Z
ValueSet.expansion[0].total[0]	2
ValueSet.expansion[0].offset[0]	0
ValueSet.expansion[0].contains[0].system[0]	https://fhir.nhs.uk/CodeSystem/patient-role-genomics
ValueSet.expansion[0].contains[0].code[0]	proband
ValueSet.expansion[0].contains[0].display[0]	Proband
ValueSet.expansion[0].contains[1].system[0]	https://fhir.nhs.uk/CodeSystem/patient-role-genomics
ValueSet.expansion[0].contains[1].code[0]	consultand
ValueSet.expansion[0].contains[1].display[0]	Consultand

XML View

<id value="genomics-patient-role" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-patient-role" />
<version value="0.1.0" />
<name value="GenomicsPatientRole" />
<title value="Genomics Patient Role" />
<status value="draft" />
<date value="2025-12-18T00:00:00.000Z" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A ValueSet used to identify the role of the subject patient in the genomic test (proband vs consultand)" />
<copyright value="Copyright © 2025+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/patient-role-genomics" />
<version value="0.1.0" />
</include>
</compose>
<expansion>
<timestamp value="2025-12-18T00:00:00Z" />
<total value="2" />
<offset value="0" />
<contains>
<system value="https://fhir.nhs.uk/CodeSystem/patient-role-genomics" />
<code value="proband" />
<display value="Proband" />
</contains>
<contains>
<system value="https://fhir.nhs.uk/CodeSystem/patient-role-genomics" />
<code value="consultand" />
<display value="Consultand" />
</contains>
</expansion>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-patient-role",
"url": "https://fhir.nhs.uk/ValueSet/genomics-patient-role",
"version": "0.1.0",
"name": "GenomicsPatientRole",
"title": "Genomics Patient Role",
"status": "draft",
"date": "2025-12-18T00:00:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net",
"use": "work",
"rank": 1
}
]
}
],
"description": "A ValueSet used to identify the role of the subject patient in the genomic test (proband vs consultand)",
"copyright": "Copyright © 2025+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-role-genomics",
"version": "0.1.0"
}
]
},
"expansion": {
"timestamp": "2025-12-18T00:00:00Z",
"total": 2,
"offset": 0,
"contains": [
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-role-genomics",
"code": "proband",
"display": "Proband"
},
{
"system": "https://fhir.nhs.uk/CodeSystem/patient-role-genomics",
"code": "consultand",
"display": "Consultand"
}
]
}

}

Propose a change to genomics-patient-role

ValueSet Genomic Reason for Testing

Usage
A ValueSet use to identify the reason for requesting a genomics test.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem ReasonforTestingGenomics

Table View

ValueSet.id[0]	genomics-reasonfortesting
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-reasonfortesting
ValueSet.version[0]	0.2.0
ValueSet.name[0]	GenomicsReasonforTesting
ValueSet.title[0]	Genomics Reason for Testing
ValueSet.status[0]	draft
ValueSet.date[0]	2025-09-09T00:00:00.000Z
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet use to identify the reason for requesting a genomics test.
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics
ValueSet.compose[0].include[0].version[0]	0.2.0

XML View

<id value="genomics-reasonfortesting" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-reasonfortesting" />
<version value="0.2.0" />
<name value="GenomicsReasonforTesting" />
<title value="Genomics Reason for Testing" />
<status value="draft" />
<date value="2025-09-09T00:00:00.000Z" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet use to identify the reason for requesting a genomics test." />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics" />
<version value="0.2.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-reasonfortesting",
"url": "https://fhir.nhs.uk/ValueSet/genomics-reasonfortesting",
"version": "0.2.0",
"name": "GenomicsReasonforTesting",
"title": "Genomics Reason for Testing",
"status": "draft",
"date": "2025-09-09T00:00:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet use to identify the reason for requesting a genomics test.",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
"version": "0.2.0"
}
]
}

}

Propose a change to ValueSet Genomic Reason for Testing

ValueSet Genomic Sample Category

Usage

A set of codes that define the category of a sample.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem UKCoreSampleCategory

Expansion

This expansion was generated on 2023-05-04T14:02:57+00:00

This value set contains 2 concepts

Code	System	Display
tumour	https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory	Tumour
germline	https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory	Germline

Table View

ValueSet.id[0]	UKCore-SampleCategory
ValueSet.url[0]	https://fhir.hl7.org.uk/ValueSet/UKCore-SampleCategory
ValueSet.version[0]	2.1.0
ValueSet.name[0]	UKCoreSampleCategory
ValueSet.title[0]	UK Core Sample Category
ValueSet.status[0]	active
ValueSet.date[0]	2023-04-28
ValueSet.publisher[0]	HL7 UK
ValueSet.contact[0].name[0]	HL7 UK
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	ukcore@hl7.org.uk
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A set of codes that define the category of a sample.
ValueSet.copyright[0]	Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory
ValueSet.expansion[0].identifier[0]	98bada17-6d7a-4c4a-989a-57f3fda4f4f5
ValueSet.expansion[0].timestamp[0]	2023-05-04T14:02:57+00:00
ValueSet.expansion[0].total[0]	2
ValueSet.expansion[0].offset[0]	0
ValueSet.expansion[0].contains[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory
ValueSet.expansion[0].contains[0].code[0]	tumour
ValueSet.expansion[0].contains[0].display[0]	Tumour
ValueSet.expansion[0].contains[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory
ValueSet.expansion[0].contains[1].code[0]	germline
ValueSet.expansion[0].contains[1].display[0]	Germline

XML View

<id value="UKCore-SampleCategory" />
<url value="https://fhir.hl7.org.uk/ValueSet/UKCore-SampleCategory" />
<version value="2.1.0" />
<name value="UKCoreSampleCategory" />
<title value="UK Core Sample Category" />
<status value="active" />
<date value="2023-04-28" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes that define the category of a sample." />
<copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory" />
</include>
</compose>
<expansion>
<identifier value="98bada17-6d7a-4c4a-989a-57f3fda4f4f5" />
<timestamp value="2023-05-04T14:02:57+00:00" />
<total value="2" />
<offset value="0" />
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory" />
<code value="tumour" />
<display value="Tumour" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory" />
<code value="germline" />
<display value="Germline" />
</contains>
</expansion>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "UKCore-SampleCategory",
"url": "https://fhir.hl7.org.uk/ValueSet/UKCore-SampleCategory",
"version": "2.1.0",
"name": "UKCoreSampleCategory",
"title": "UK Core Sample Category",
"status": "active",
"date": "2023-04-28",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "A set of codes that define the category of a sample.",
"copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory"
}
]
},
"expansion": {
"identifier": "98bada17-6d7a-4c4a-989a-57f3fda4f4f5",
"timestamp": "2023-05-04T14:02:57+00:00",
"total": 2,
"offset": 0,
"contains": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory",
"code": "tumour",
"display": "Tumour"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory",
"code": "germline",
"display": "Germline"
}
]
}

}

Propose a change to ValueSet Genomic Sample Category

ValueSet Genomic Sample State

Usage

A set of codes that define the category of a sample.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem v2.0493
Import all codes from CodeSystem UKCorePrimarySampleState

Table View

ValueSet.id[0]	UKCore-SampleState
ValueSet.url[0]	https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState
ValueSet.version[0]	1.0.0
ValueSet.name[0]	UKCoreSampleState
ValueSet.title[0]	UK Core Sample State
ValueSet.status[0]	active
ValueSet.date[0]	2024-10-07
ValueSet.publisher[0]	HL7 UK
ValueSet.contact[0].name[0]	HL7 UK
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	ukcore@hl7.org.uk
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A set of codes used to indicate the sample state/condition. Selected from the Genomics Master Datasets
ValueSet.copyright[0]	Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	http://terminology.hl7.org/CodeSystem/v2-0493
ValueSet.compose[0].include[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState

XML View

<id value="UKCore-SampleState" />
<url value="https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState" />
<version value="1.0.0" />
<name value="UKCoreSampleState" />
<title value="UK Core Sample State" />
<status value="active" />
<date value="2024-10-07" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes used to indicate the sample state/condition. Selected from the Genomics Master Datasets" />
<copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="http://terminology.hl7.org/CodeSystem/v2-0493" />
</include>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "UKCore-SampleState",
"url": "https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState",
"version": "1.0.0",
"name": "UKCoreSampleState",
"title": "UK Core Sample State",
"status": "active",
"date": "2024-10-07",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "A set of codes used to indicate the sample state/condition. Selected from the Genomics Master Datasets",
"copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "http://terminology.hl7.org/CodeSystem/v2-0493"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState"
}
]
}

}

Propose a change to ValueSet Genomic Sample State

ValueSet Genomic Sequencing Category

Usage

A set of codes that define if the service request is for Whole Genome Sequencing (WGS)/non-WGS Rare Disease/Cancer.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem UKCoreGenomeSequencingCategory

Expansion

This expansion was generated on 2023-05-04T14:47:02+00:00

This value set contains 4 concepts

Code	System	Display
rare-disease-wgs	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory	Rare Disease - WGS
rare-disease-non-wgs	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory	Rare Disease - Non-WGS
cancer-wgs	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory	Cancer - WGS
cancer-non-wgs	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory	Cancer - Non-WGS

Table View

ValueSet.id[0]	UKCore-GenomeSequencingCategory
ValueSet.url[0]	https://fhir.hl7.org.uk/ValueSet/UKCore-GenomeSequencingCategory
ValueSet.version[0]	1.0.0
ValueSet.name[0]	UKCoreGenomeSequencingCategory
ValueSet.title[0]	UK Core Genome Sequencing Category
ValueSet.status[0]	active
ValueSet.date[0]	2023-04-28
ValueSet.publisher[0]	HL7 UK
ValueSet.contact[0].name[0]	HL7 UK
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	ukcore@hl7.org.uk
ValueSet.contact[0].telecom[0].use[0]	work
ValueSet.contact[0].telecom[0].rank[0]	1
ValueSet.description[0]	A set of codes that define if the service request is for Whole Genome Sequencing (WGS)/non-WGS Rare Disease/Cancer.
ValueSet.copyright[0]	Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory
ValueSet.expansion[0].identifier[0]	bde2a094-9417-4687-8f15-6f93fb38b26b
ValueSet.expansion[0].timestamp[0]	2023-05-04T14:47:02+00:00
ValueSet.expansion[0].total[0]	4
ValueSet.expansion[0].offset[0]	0
ValueSet.expansion[0].contains[0].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory
ValueSet.expansion[0].contains[0].code[0]	rare-disease-wgs
ValueSet.expansion[0].contains[0].display[0]	Rare Disease - WGS
ValueSet.expansion[0].contains[1].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory
ValueSet.expansion[0].contains[1].code[0]	rare-disease-non-wgs
ValueSet.expansion[0].contains[1].display[0]	Rare Disease - Non-WGS
ValueSet.expansion[0].contains[2].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory
ValueSet.expansion[0].contains[2].code[0]	cancer-wgs
ValueSet.expansion[0].contains[2].display[0]	Cancer - WGS
ValueSet.expansion[0].contains[3].system[0]	https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory
ValueSet.expansion[0].contains[3].code[0]	cancer-non-wgs
ValueSet.expansion[0].contains[3].display[0]	Cancer - Non-WGS

XML View

<id value="UKCore-GenomeSequencingCategory" />
<url value="https://fhir.hl7.org.uk/ValueSet/UKCore-GenomeSequencingCategory" />
<version value="1.0.0" />
<name value="UKCoreGenomeSequencingCategory" />
<title value="UK Core Genome Sequencing Category" />
<status value="active" />
<date value="2023-04-28" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes that define if the service request is for Whole Genome Sequencing (WGS)/non-WGS Rare Disease/Cancer." />
<copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
</include>
</compose>
<expansion>
<identifier value="bde2a094-9417-4687-8f15-6f93fb38b26b" />
<timestamp value="2023-05-04T14:47:02+00:00" />
<total value="4" />
<offset value="0" />
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
<code value="rare-disease-wgs" />
<display value="Rare Disease - WGS" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
<code value="rare-disease-non-wgs" />
<display value="Rare Disease - Non-WGS" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
<code value="cancer-wgs" />
<display value="Cancer - WGS" />
</contains>
<contains>
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
<code value="cancer-non-wgs" />
<display value="Cancer - Non-WGS" />
</contains>
</expansion>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "UKCore-GenomeSequencingCategory",
"url": "https://fhir.hl7.org.uk/ValueSet/UKCore-GenomeSequencingCategory",
"version": "1.0.0",
"name": "UKCoreGenomeSequencingCategory",
"title": "UK Core Genome Sequencing Category",
"status": "active",
"date": "2023-04-28",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "A set of codes that define if the service request is for Whole Genome Sequencing (WGS)/non-WGS Rare Disease/Cancer.",
"copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory"
}
]
},
"expansion": {
"identifier": "bde2a094-9417-4687-8f15-6f93fb38b26b",
"timestamp": "2023-05-04T14:47:02+00:00",
"total": 4,
"offset": 0,
"contains": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory",
"code": "rare-disease-wgs",
"display": "Rare Disease - WGS"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory",
"code": "rare-disease-non-wgs",
"display": "Rare Disease - Non-WGS"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory",
"code": "cancer-wgs",
"display": "Cancer - WGS"
},
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory",
"code": "cancer-non-wgs",
"display": "Cancer - Non-WGS"
}
]
}

}

Propose a change to ValueSet Genomic Sequencing Category

ValueSet Genomics Specimen Collection Special Handling

Usage
A ValueSet use to identify the type of special collection process require to handle some specimen in genomics.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem SpecimenCollectionSpecialHandlingGenomics

Table View

ValueSet.id[0]	genomics-specimen-collection-specialhandling
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-specimen-collection-specialhandling
ValueSet.version[0]	0.1.0
ValueSet.name[0]	GenomicsSpecimenCollectionSpecialHandling
ValueSet.title[0]	Genomics Specimen Collection Special Handling
ValueSet.status[0]	draft
ValueSet.date[0]	2024-08-05T00:00:00.000Z
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet use to identify the type of special collection process require to handle some specimen in genomics.
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/specimen-collection-specialhandling-genomics
ValueSet.compose[0].include[0].version[0]	0.1.0

XML View

<id value="genomics-specimen-collection-specialhandling" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-specimen-collection-specialhandling" />
<version value="0.1.0" />
<name value="GenomicsSpecimenCollectionSpecialHandling" />
<title value="Genomics Specimen Collection Special Handling" />
<status value="draft" />
<date value="2024-08-05T00:00:00.000Z" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet use to identify the type of special collection process require to handle some specimen in genomics." />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/specimen-collection-specialhandling-genomics" />
<version value="0.1.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-specimen-collection-specialhandling",
"url": "https://fhir.nhs.uk/ValueSet/genomics-specimen-collection-specialhandling",
"version": "0.1.0",
"name": "GenomicsSpecimenCollectionSpecialHandling",
"title": "Genomics Specimen Collection Special Handling",
"status": "draft",
"date": "2024-08-05T00:00:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet use to identify the type of special collection process require to handle some specimen in genomics.",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/specimen-collection-specialhandling-genomics",
"version": "0.1.0"
}
]
}

}

Propose a change to ValueSet-Genomics Specimen Collection Special Handling

ValueSet Genomic Test Types

Usage
A ValueSet to identify the category of genomic test types

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem TestTypeGenomics

Table View

ValueSet.id[0]	genomics-test-types
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-test-types
ValueSet.version[0]	0.1.1
ValueSet.name[0]	GenomicsTestTypes
ValueSet.title[0]	Genomics Test Types
ValueSet.status[0]	draft
ValueSet.date[0]	2024-09-10T10:17:52.3231281+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the category of genomic test types
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/test-type-genomics
ValueSet.compose[0].include[0].version[0]	0.2.0

XML View

<id value="genomics-test-types" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-test-types" />
<version value="0.1.1" />
<name value="GenomicsTestTypes" />
<title value="Genomics Test Types" />
<status value="draft" />
<date value="2024-09-10T10:17:52.3231281+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the category of genomic test types" />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/test-type-genomics" />
<version value="0.2.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-test-types",
"url": "https://fhir.nhs.uk/ValueSet/genomics-test-types",
"version": "0.1.1",
"name": "GenomicsTestTypes",
"title": "Genomics Test Types",
"status": "draft",
"date": "2024-09-10T10:17:52.3231281+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the category of genomic test types",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/test-type-genomics",
"version": "0.2.0"
}
]
}

}

Propose a change to ValueSet Genomic Test Types

ValueSet Genomics Types of Re-Analysis Test

Usage
A ValueSet use to identify the types of re-analysis test request in genomics.

HTML View

This value set includes codes from the following code systems:

Import all codes from CodeSystem TypesofReAnalysisTestGenomics

Table View

ValueSet.id[0]	genomics-types-of-reanalysistest
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-types-of-reanalysistest
ValueSet.version[0]	0.1.0
ValueSet.name[0]	GenomicsTypesofReAnalysisTest
ValueSet.title[0]	Genomics Types of Re-Analysis Test
ValueSet.status[0]	draft
ValueSet.date[0]	2024-07-09T00:00:00.000Z
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet use to identify the types of re-analysis test request in genomics.
ValueSet.copyright[0]	Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	https://fhir.nhs.uk/CodeSystem/types-of-reanalysistest-genomics
ValueSet.compose[0].include[0].version[0]	0.1.0

XML View

<id value="genomics-types-of-reanalysistest" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-types-of-reanalysistest" />
<version value="0.1.0" />
<name value="GenomicsTypesofReAnalysisTest" />
<title value="Genomics Types of Re-Analysis Test" />
<status value="draft" />
<date value="2024-07-09T00:00:00.000Z" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet use to identify the types of re-analysis test request in genomics." />
<copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="https://fhir.nhs.uk/CodeSystem/types-of-reanalysistest-genomics" />
<version value="0.1.0" />
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-types-of-reanalysistest",
"url": "https://fhir.nhs.uk/ValueSet/genomics-types-of-reanalysistest",
"version": "0.1.0",
"name": "GenomicsTypesofReAnalysisTest",
"title": "Genomics Types of Re-Analysis Test",
"status": "draft",
"date": "2024-07-09T00:00:00.000Z",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet use to identify the types of re-analysis test request in genomics.",
"copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "https://fhir.nhs.uk/CodeSystem/types-of-reanalysistest-genomics",
"version": "0.1.0"
}
]
}

}

Propose a change to ValueSet Genomics Types of Re-Analysis Test

ValueSet Genomics FH SNOMED CT Codes

Usage
A ValueSet to identify the SNOMED-CT codes for use in Familial hypercholesterolaemia reporting as recommended by The National Cholesterol Working Group

HTML View

This value set includes codes from the following code systems:

The following codes from system: SNOMED_CT

Code	Display
163841000237109	Familial hypercholesterolaemia comprehensive genetic test result
163851000237107	Familial hypercholesterolaemia targeted genetic test result
204871000237101	Apolipoprotein B gene mutation positive
204901000237101	Apolipoprotein E gene mutation positive
204881000237104	Proprotein convertase subtilisin/kexin type 9 gene mutation positive
204891000237102	Low density lipoprotein receptor gene mutation positive
204931000237105	Genetic variant causing familial hypercholesterolaemia not detected
1669121000000107	Genetic variant of uncertain significance for familial hypercholesterolaemia detected
238078005	Familial hypercholesterolemia - homozygous
238079002	Familial hypercholesterolemia - heterozygous
403830007	Familial hypercholesterolemia due to homozygous low density lipoprotein receptor mutation

Table View

ValueSet.id[0]	genomics-FH-SNOMED-CT-codes
ValueSet.url[0]	https://fhir.nhs.uk/ValueSet/genomics-FH-SNOMED-CT-codes
ValueSet.version[0]	0.1.0
ValueSet.name[0]	GenomicsFHSNOMEDCTCodes
ValueSet.title[0]	Genomics FH SNOMED CT Codes
ValueSet.status[0]	draft
ValueSet.date[0]	2026-01-20T14:15:00+00:00
ValueSet.publisher[0]	NHS England
ValueSet.contact[0].name[0]	NHS England
ValueSet.contact[0].telecom[0].system[0]	email
ValueSet.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
ValueSet.description[0]	A ValueSet to identify the SNOMED-CT codes for use in Familial hypercholesterolaemia reporting as recommended by The National Cholesterol Working Group
ValueSet.copyright[0]	Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
ValueSet.compose[0].include[0].system[0]	http://snomed.info/sct
ValueSet.compose[0].include[0].concept[0].code[0]	163841000237109
ValueSet.compose[0].include[0].concept[0].display[0]	Familial hypercholesterolaemia comprehensive genetic test result
ValueSet.compose[0].include[0].concept[1].code[0]	163851000237107
ValueSet.compose[0].include[0].concept[1].display[0]	Familial hypercholesterolaemia targeted genetic test result
ValueSet.compose[0].include[0].concept[2].code[0]	204871000237101
ValueSet.compose[0].include[0].concept[2].display[0]	Apolipoprotein B gene mutation positive
ValueSet.compose[0].include[0].concept[3].code[0]	204901000237101
ValueSet.compose[0].include[0].concept[3].display[0]	Apolipoprotein E gene mutation positive
ValueSet.compose[0].include[0].concept[4].code[0]	204881000237104
ValueSet.compose[0].include[0].concept[4].display[0]	Proprotein convertase subtilisin/kexin type 9 gene mutation positive
ValueSet.compose[0].include[0].concept[5].code[0]	204891000237102
ValueSet.compose[0].include[0].concept[5].display[0]	Low density lipoprotein receptor gene mutation positive
ValueSet.compose[0].include[0].concept[6].code[0]	204931000237105
ValueSet.compose[0].include[0].concept[6].display[0]	Genetic variant causing familial hypercholesterolaemia not detected
ValueSet.compose[0].include[0].concept[7].code[0]	1669121000000107
ValueSet.compose[0].include[0].concept[7].display[0]	Genetic variant of uncertain significance for familial hypercholesterolaemia detected
ValueSet.compose[0].include[0].concept[8].code[0]	238078005
ValueSet.compose[0].include[0].concept[8].display[0]	Familial hypercholesterolemia - homozygous
ValueSet.compose[0].include[0].concept[9].code[0]	238079002
ValueSet.compose[0].include[0].concept[9].display[0]	Familial hypercholesterolemia - heterozygous
ValueSet.compose[0].include[0].concept[10].code[0]	403830007
ValueSet.compose[0].include[0].concept[10].display[0]	Familial hypercholesterolemia due to homozygous low density lipoprotein receptor mutation

XML View

<id value="genomics-FH-SNOMED-CT-codes" />
<url value="https://fhir.nhs.uk/ValueSet/genomics-FH-SNOMED-CT-codes" />
<version value="0.1.0" />
<name value="GenomicsFHSNOMEDCTCodes" />
<title value="Genomics FH SNOMED CT Codes" />
<status value="draft" />
<date value="2026-01-20T14:15:00+00:00" />
<publisher value="NHS England" />
<contact>
<name value="NHS England" />
<telecom>
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
</telecom>
</contact>
<description value="A ValueSet to identify the SNOMED-CT codes for use in Familial hypercholesterolaemia reporting as recommended by The National Cholesterol Working Group" />
<copyright value="Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
<compose>
<include>
<system value="http://snomed.info/sct" />
<concept>
<code value="163841000237109" />
<display value="Familial hypercholesterolaemia comprehensive genetic test result" />
</concept>
<concept>
<code value="163851000237107" />
<display value="Familial hypercholesterolaemia targeted genetic test result" />
</concept>
<concept>
<code value="204871000237101" />
<display value="Apolipoprotein B gene mutation positive" />
</concept>
<concept>
<code value="204901000237101" />
<display value="Apolipoprotein E gene mutation positive" />
</concept>
<concept>
<code value="204881000237104" />
<display value="Proprotein convertase subtilisin/kexin type 9 gene mutation positive" />
</concept>
<concept>
<code value="204891000237102" />
<display value="Low density lipoprotein receptor gene mutation positive" />
</concept>
<concept>
<code value="204931000237105" />
<display value="Genetic variant causing familial hypercholesterolaemia not detected" />
</concept>
<concept>
<code value="1669121000000107" />
<display value="Genetic variant of uncertain significance for familial hypercholesterolaemia detected" />
</concept>
<concept>
<code value="238078005" />
<display value="Familial hypercholesterolemia - homozygous" />
</concept>
<concept>
<code value="238079002" />
<display value="Familial hypercholesterolemia - heterozygous" />
</concept>
<concept>
<code value="403830007" />
<display value="Familial hypercholesterolemia due to homozygous low density lipoprotein receptor mutation" />
</concept>
</include>
</compose>

</ValueSet>

JSON View

{

"resourceType": "ValueSet",
"id": "genomics-FH-SNOMED-CT-codes",
"url": "https://fhir.nhs.uk/ValueSet/genomics-FH-SNOMED-CT-codes",
"version": "0.1.0",
"name": "GenomicsFHSNOMEDCTCodes",
"title": "Genomics FH SNOMED CT Codes",
"status": "draft",
"date": "2026-01-20T14:15:00+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net"
}
]
}
],
"description": "A ValueSet to identify the SNOMED-CT codes for use in Familial hypercholesterolaemia reporting as recommended by The National Cholesterol Working Group",
"copyright": "Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \\\\\\\"License\\\\\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\\\\\"AS IS\\\\\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
"compose": {
"include": [
{
"system": "http://snomed.info/sct",
"concept": [
{
"code": "163841000237109",
"display": "Familial hypercholesterolaemia comprehensive genetic test result"
},
{
"code": "163851000237107",
"display": "Familial hypercholesterolaemia targeted genetic test result"
},
{
"code": "204871000237101",
"display": "Apolipoprotein B gene mutation positive"
},
{
"code": "204901000237101",
"display": "Apolipoprotein E gene mutation positive"
},
{
"code": "204881000237104",
"display": "Proprotein convertase subtilisin/kexin type 9 gene mutation positive"
},
{
"code": "204891000237102",
"display": "Low density lipoprotein receptor gene mutation positive"
},
{
"code": "204931000237105",
"display": "Genetic variant causing familial hypercholesterolaemia not detected"
},
{
"code": "1669121000000107",
"display": "Genetic variant of uncertain significance for familial hypercholesterolaemia detected"
},
{
"code": "238078005",
"display": "Familial hypercholesterolemia - homozygous"
},
{
"code": "238079002",
"display": "Familial hypercholesterolemia - heterozygous"
},
{
"code": "403830007",
"display": "Familial hypercholesterolemia due to homozygous low density lipoprotein receptor mutation"
}
]
}
]
}

}