Notice
- Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
- This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.
ConceptMaps
ConceptMaps created for use within the NHS England FHIR Genomics Implementation Guide.
These are used for the translation of concepts between the NHS Master Data Set (MDS) to equivalent SNOMED CT concepts, and FHIR CodeSystems.
ConceptMap Genomic Disease Status
Usage |
---|
ConceptMap used for the translation and recording of concepts for the disease status. This is intended for the element Condition.clinicalStatus |
HTML View
to http://terminology.hl7.org/ValueSet/condition-clinical
Source | Equivalence | Destination | Comment |
affected (Affected) | inexact | active (Active) | Although, the relationship is inexact, Active is the recommended concept to indicate/record that disease status is affected. |
unaffected (Unaffected) | inexact | inactive (Inactive) | Although, the relationship is inexact, Inactive is the recommended concept to indicate/record that disease status is unaffected. |
unknown (Unknown) | unmatched | When disease status is unknown, clinical status should be omitted from the Condition resource. |
Table View
ConceptMap.id[0] | genomics-disease-status |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-disease-status |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsDiseaseStatus |
ConceptMap.title[0] | Genomics Disease Status |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-08T14:15:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for the disease status. This is intended for the element Condition.clinicalStatus |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://terminology.hl7.org/ValueSet/condition-clinical |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://terminology.hl7.org/CodeSystem/condition-clinical |
ConceptMap.group[0].element[0].code[0] | affected |
ConceptMap.group[0].element[0].display[0] | Affected |
ConceptMap.group[0].element[0].target[0].code[0] | active |
ConceptMap.group[0].element[0].target[0].display[0] | Active |
ConceptMap.group[0].element[0].target[0].equivalence[0] | inexact |
ConceptMap.group[0].element[0].target[0].comment[0] | Although, the relationship is inexact, Active is the recommended concept to indicate/record that disease status is affected. |
ConceptMap.group[0].element[1].code[0] | unaffected |
ConceptMap.group[0].element[1].display[0] | Unaffected |
ConceptMap.group[0].element[1].target[0].code[0] | inactive |
ConceptMap.group[0].element[1].target[0].display[0] | Inactive |
ConceptMap.group[0].element[1].target[0].equivalence[0] | inexact |
ConceptMap.group[0].element[1].target[0].comment[0] | Although, the relationship is inexact, Inactive is the recommended concept to indicate/record that disease status is unaffected. |
ConceptMap.group[0].element[2].code[0] | unknown |
ConceptMap.group[0].element[2].display[0] | Unknown |
ConceptMap.group[0].element[2].target[0].equivalence[0] | unmatched |
ConceptMap.group[0].element[2].target[0].comment[0] | When disease status is unknown, clinical status should be omitted from the Condition resource. |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-disease-status" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-disease-status" /> <version value="0.1.0" /> <name value="GenomicsDiseaseStatus" /> <title value="Genomics Disease Status" /> <status value="draft" /> <date value="2024-08-08T14:15:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for the disease status. This is intended for the element Condition.clinicalStatus" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://terminology.hl7.org/ValueSet/condition-clinical" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://terminology.hl7.org/CodeSystem/condition-clinical" /> <element> <code value="affected" /> <display value="Affected" /> <target> <code value="active" /> <display value="Active" /> <equivalence value="inexact" /> <comment value="Although, the relationship is inexact, Active is the recommended concept to indicate/record that disease status is affected." /> </target> </element> <element> <code value="unaffected" /> <display value="Unaffected" /> <target> <code value="inactive" /> <display value="Inactive" /> <equivalence value="inexact" /> <comment value="Although, the relationship is inexact, Inactive is the recommended concept to indicate/record that disease status is unaffected." /> </target> </element> <element> <code value="unknown" /> <display value="Unknown" /> <target> <equivalence value="unmatched" /> <comment value="When disease status is unknown, clinical status should be omitted from the Condition resource." /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-disease-status", "url": "https://fhir.nhs.uk/ConceptMap/genomics-disease-status", "version": "0.1.0", "name": "GenomicsDiseaseStatus", "title": "Genomics Disease Status", "status": "draft", "date": "2024-08-08T14:15:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for the disease status. This is intended for the element Condition.clinicalStatus", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://terminology.hl7.org/ValueSet/condition-clinical", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://terminology.hl7.org/CodeSystem/condition-clinical", "element": [ { "code": "affected", "display": "Affected", "target": [ { "code": "active", "display": "Active", "equivalence": "inexact", "comment": "Although, the relationship is inexact, Active is the recommended concept to indicate/record that disease status is affected." } ] }, { "code": "unaffected", "display": "Unaffected", "target": [ { "code": "inactive", "display": "Inactive", "equivalence": "inexact", "comment": "Although, the relationship is inexact, Inactive is the recommended concept to indicate/record that disease status is unaffected." } ] }, { "code": "unknown", "display": "Unknown", "target": [ { "equivalence": "unmatched", "comment": "When disease status is unknown, clinical status should be omitted from the Condition resource." } ] } ] } ] }
ConceptMap Genomic Fetal Maternal Screening Genotype
Usage |
---|
ConceptMap used for the translation and recording of concepts for fetal maternal screening genotype. This is intended for the element Condition.code. An appropriate SNOMED CT code or free text should be used to record the Genotype. |
Note:
An appropriate SNOMED CT code or free text should be used to record the Genotype
HTML View
to SNOMED_CT
Source | Equivalence | Destination |
alpha-beta-thalassaemia (Alpha Beta Thalassaemia) | equivalent | 234389001 (Alpha-beta thalassemia (disorder)) |
HbAC (HbAC) | equivalent | 76050008 (Hemoglobin C trait (disorder)) |
HbAS (HbAS) | equivalent | 417357006 (Sickling disorder due to haemoglobin S) |
HbSC (HbSC) | equivalent | 35434009 (Sickle cell-hemoglobin C disease (disorder)) |
HbSS (HbSS) | equivalent | 127040003 (Sickle cell-hemoglobin SS disease (disorder)) |
other (OTHER) | equivalent | other (Other) |
Table View
ConceptMap.id[0] | genomics-fetal-maternal-screening-genotype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-fetal-maternal-screening-genotype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsFetalMaternalScreeningGenotype |
ConceptMap.title[0] | Genomics Fetal Maternal Screening Genotype |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-08T18:15:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for fetal maternal screening genotype. This is intended for the element Condition.code. An appropriate SNOMED CT code or free text should be used to record the Genotype. |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | alpha-beta-thalassaemia |
ConceptMap.group[0].element[0].display[0] | Alpha Beta Thalassaemia |
ConceptMap.group[0].element[0].target[0].code[0] | 234389001 |
ConceptMap.group[0].element[0].target[0].display[0] | Alpha-beta thalassemia (disorder) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | HbAC |
ConceptMap.group[0].element[1].display[0] | HbAC |
ConceptMap.group[0].element[1].target[0].code[0] | 76050008 |
ConceptMap.group[0].element[1].target[0].display[0] | Hemoglobin C trait (disorder) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | HbAS |
ConceptMap.group[0].element[2].display[0] | HbAS |
ConceptMap.group[0].element[2].target[0].code[0] | 417357006 |
ConceptMap.group[0].element[2].target[0].display[0] | Sickling disorder due to haemoglobin S |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | HbSC |
ConceptMap.group[0].element[3].display[0] | HbSC |
ConceptMap.group[0].element[3].target[0].code[0] | 35434009 |
ConceptMap.group[0].element[3].target[0].display[0] | Sickle cell-hemoglobin C disease (disorder) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | HbSS |
ConceptMap.group[0].element[4].display[0] | HbSS |
ConceptMap.group[0].element[4].target[0].code[0] | 127040003 |
ConceptMap.group[0].element[4].target[0].display[0] | Sickle cell-hemoglobin SS disease (disorder) |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | other |
ConceptMap.group[0].element[5].display[0] | OTHER |
ConceptMap.group[0].element[5].target[0].code[0] | other |
ConceptMap.group[0].element[5].target[0].display[0] | Other |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-fetal-maternal-screening-genotype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-fetal-maternal-screening-genotype" /> <version value="0.1.0" /> <name value="GenomicsFetalMaternalScreeningGenotype" /> <title value="Genomics Fetal Maternal Screening Genotype" /> <status value="draft" /> <date value="2024-08-08T18:15:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for fetal maternal screening genotype. This is intended for the element Condition.code. An appropriate SNOMED CT code or free text should be used to record the Genotype." /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="alpha-beta-thalassaemia" /> <display value="Alpha Beta Thalassaemia" /> <target> <code value="234389001" /> <display value="Alpha-beta thalassemia (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="HbAC" /> <display value="HbAC" /> <target> <code value="76050008" /> <display value="Hemoglobin C trait (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="HbAS" /> <display value="HbAS" /> <target> <code value="417357006" /> <display value="Sickling disorder due to haemoglobin S" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="HbSC" /> <display value="HbSC" /> <target> <code value="35434009" /> <display value="Sickle cell-hemoglobin C disease (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="HbSS" /> <display value="HbSS" /> <target> <code value="127040003" /> <display value="Sickle cell-hemoglobin SS disease (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="other" /> <display value="OTHER" /> <target> <code value="other" /> <display value="Other" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-fetal-maternal-screening-genotype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-fetal-maternal-screening-genotype", "version": "0.1.0", "name": "GenomicsFetalMaternalScreeningGenotype", "title": "Genomics Fetal Maternal Screening Genotype", "status": "draft", "date": "2024-08-08T18:15:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for fetal maternal screening genotype. This is intended for the element Condition.code. An appropriate SNOMED CT code or free text should be used to record the Genotype.", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "alpha-beta-thalassaemia", "display": "Alpha Beta Thalassaemia", "target": [ { "code": "234389001", "display": "Alpha-beta thalassemia (disorder)", "equivalence": "equivalent" } ] }, { "code": "HbAC", "display": "HbAC", "target": [ { "code": "76050008", "display": "Hemoglobin C trait (disorder)", "equivalence": "equivalent" } ] }, { "code": "HbAS", "display": "HbAS", "target": [ { "code": "417357006", "display": "Sickling disorder due to haemoglobin S", "equivalence": "equivalent" } ] }, { "code": "HbSC", "display": "HbSC", "target": [ { "code": "35434009", "display": "Sickle cell-hemoglobin C disease (disorder)", "equivalence": "equivalent" } ] }, { "code": "HbSS", "display": "HbSS", "target": [ { "code": "127040003", "display": "Sickle cell-hemoglobin SS disease (disorder)", "equivalence": "equivalent" } ] }, { "code": "other", "display": "OTHER", "target": [ { "code": "other", "display": "Other", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Condition Laterality of Hearing Loss
Usage |
---|
ConceptMap used for the translation and recording of concepts for laterality of hearing loss condition. This is intended for the element Condition.code |
HTML View
to http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2015188001%20
Source | Equivalence | Destination |
bilateral (Bilateral) | equivalent | 95820000 (Bilateral hearing loss (disorder)) |
left (Left) | equivalent | 473424007 (Hearing loss of left ear (disorder)) |
right (Right) | equivalent | 473423001 (Hearing loss of right ear (disorder)) |
Table View
ConceptMap.id[0] | genomics-laterality-of-hearingloss |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-laterality-of-hearingloss |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsLateralityofHearingLoss |
ConceptMap.title[0] | Genomics Laterality of Hearing Loss |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-22T16:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for laterality of hearing loss condition. This is intended for the element Condition.code |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2015188001%20 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | bilateral |
ConceptMap.group[0].element[0].display[0] | Bilateral |
ConceptMap.group[0].element[0].target[0].code[0] | 95820000 |
ConceptMap.group[0].element[0].target[0].display[0] | Bilateral hearing loss (disorder) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | left |
ConceptMap.group[0].element[1].display[0] | Left |
ConceptMap.group[0].element[1].target[0].code[0] | 473424007 |
ConceptMap.group[0].element[1].target[0].display[0] | Hearing loss of left ear (disorder) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | right |
ConceptMap.group[0].element[2].display[0] | Right |
ConceptMap.group[0].element[2].target[0].code[0] | 473423001 |
ConceptMap.group[0].element[2].target[0].display[0] | Hearing loss of right ear (disorder) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-laterality-of-hearingloss" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-laterality-of-hearingloss" /> <version value="0.1.0" /> <name value="GenomicsLateralityofHearingLoss" /> <title value="Genomics Laterality of Hearing Loss" /> <status value="draft" /> <date value="2024-08-22T16:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for laterality of hearing loss condition. This is intended for the element Condition.code" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2015188001%20" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="bilateral" /> <display value="Bilateral" /> <target> <code value="95820000" /> <display value="Bilateral hearing loss (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="left" /> <display value="Left" /> <target> <code value="473424007" /> <display value="Hearing loss of left ear (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="right" /> <display value="Right" /> <target> <code value="473423001" /> <display value="Hearing loss of right ear (disorder)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-laterality-of-hearingloss", "url": "https://fhir.nhs.uk/ConceptMap/genomics-laterality-of-hearingloss", "version": "0.1.0", "name": "GenomicsLateralityofHearingLoss", "title": "Genomics Laterality of Hearing Loss", "status": "draft", "date": "2024-08-22T16:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for laterality of hearing loss condition. This is intended for the element Condition.code", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2015188001%20", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "bilateral", "display": "Bilateral", "target": [ { "code": "95820000", "display": "Bilateral hearing loss (disorder)", "equivalence": "equivalent" } ] }, { "code": "left", "display": "Left", "target": [ { "code": "473424007", "display": "Hearing loss of left ear (disorder)", "equivalence": "equivalent" } ] }, { "code": "right", "display": "Right", "target": [ { "code": "473423001", "display": "Hearing loss of right ear (disorder)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Condition Liquid Tumour Type
Usage |
---|
ConceptMap used for the translation and recording of concepts when Condition.code field = liquid tumour types |
HTML View
Source | Equivalence | Destination |
acute-myeloid-leukemia (Acute myeloid leukemia) | equivalent | 91861009 (Acute myeloid leukemia (disorder)) |
acute-lymphoid-leukemia (Acute lymphoid leukemia) | equivalent | 91857003 (Acute lymphoid leukemia, disease (disorder)) |
Table View
ConceptMap.id[0] | genomics-condition-liquidtumourtype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-condition-liquidtumourtype |
ConceptMap.version[0] | 0.2.0 |
ConceptMap.name[0] | GenomicsConditionLiquidTumourType |
ConceptMap.title[0] | Genomics Condition Liquid Tumour Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-11T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts when Condition.code field = liquid tumour types |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | acute-myeloid-leukemia |
ConceptMap.group[0].element[0].display[0] | Acute myeloid leukemia |
ConceptMap.group[0].element[0].target[0].code[0] | 91861009 |
ConceptMap.group[0].element[0].target[0].display[0] | Acute myeloid leukemia (disorder) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | acute-lymphoid-leukemia |
ConceptMap.group[0].element[1].display[0] | Acute lymphoid leukemia |
ConceptMap.group[0].element[1].target[0].code[0] | 91857003 |
ConceptMap.group[0].element[1].target[0].display[0] | Acute lymphoid leukemia, disease (disorder) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-condition-liquidtumourtype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-condition-liquidtumourtype" /> <version value="0.2.0" /> <name value="GenomicsConditionLiquidTumourType" /> <title value="Genomics Condition Liquid Tumour Type" /> <status value="draft" /> <date value="2024-06-11T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts when Condition.code field = liquid tumour types" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="acute-myeloid-leukemia" /> <display value="Acute myeloid leukemia" /> <target> <code value="91861009" /> <display value="Acute myeloid leukemia (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="acute-lymphoid-leukemia" /> <display value="Acute lymphoid leukemia" /> <target> <code value="91857003" /> <display value="Acute lymphoid leukemia, disease (disorder)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-condition-liquidtumourtype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-condition-liquidtumourtype", "version": "0.2.0", "name": "GenomicsConditionLiquidTumourType", "title": "Genomics Condition Liquid Tumour Type", "status": "draft", "date": "2024-06-11T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts when Condition.code field = liquid tumour types", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "acute-myeloid-leukemia", "display": "Acute myeloid leukemia", "target": [ { "code": "91861009", "display": "Acute myeloid leukemia (disorder)", "equivalence": "equivalent" } ] }, { "code": "acute-lymphoid-leukemia", "display": "Acute lymphoid leukemia", "target": [ { "code": "91857003", "display": "Acute lymphoid leukemia, disease (disorder)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Condition Pancreatic Tumour Type
Usage |
---|
ConceptMap used for the translation and recording of concepts when Condition.code field = pancreatic tumour type |
HTML View
Source | Equivalence | Destination |
insulinoma (INSULINOMA) | equivalent | 20955008 (Insulinoma, malignant (morphologic abnormality)) |
gastrinoma (GASTRINOMA) | equivalent | 19756007 (Gastrinoma, malignant (morphologic abnormality)) |
glucagonoma (GLUCAGONOMA) | equivalent | 66515009 (Glucagonoma, malignant (morphologic abnormality)) |
vipoma (VIPOMA) | equivalent | 31131002 (Vipoma, malignant (morphologic abnormality)) |
Table View
ConceptMap.id[0] | genomics-condition-pancreatictumourtype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-condition-pancreatictumourtype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsConditionPancreaticTumourType |
ConceptMap.title[0] | Genomics Condition Pancreatic Tumour Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-11T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts when Condition.code field = pancreatic tumour type |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | insulinoma |
ConceptMap.group[0].element[0].display[0] | INSULINOMA |
ConceptMap.group[0].element[0].target[0].code[0] | 20955008 |
ConceptMap.group[0].element[0].target[0].display[0] | Insulinoma, malignant (morphologic abnormality) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | gastrinoma |
ConceptMap.group[0].element[1].display[0] | GASTRINOMA |
ConceptMap.group[0].element[1].target[0].code[0] | 19756007 |
ConceptMap.group[0].element[1].target[0].display[0] | Gastrinoma, malignant (morphologic abnormality) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | glucagonoma |
ConceptMap.group[0].element[2].display[0] | GLUCAGONOMA |
ConceptMap.group[0].element[2].target[0].code[0] | 66515009 |
ConceptMap.group[0].element[2].target[0].display[0] | Glucagonoma, malignant (morphologic abnormality) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | vipoma |
ConceptMap.group[0].element[3].display[0] | VIPOMA |
ConceptMap.group[0].element[3].target[0].code[0] | 31131002 |
ConceptMap.group[0].element[3].target[0].display[0] | Vipoma, malignant (morphologic abnormality) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-condition-pancreatictumourtype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-condition-pancreatictumourtype" /> <version value="0.1.0" /> <name value="GenomicsConditionPancreaticTumourType" /> <title value="Genomics Condition Pancreatic Tumour Type" /> <status value="draft" /> <date value="2024-06-11T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts when Condition.code field = pancreatic tumour type" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="insulinoma" /> <display value="INSULINOMA" /> <target> <code value="20955008" /> <display value="Insulinoma, malignant (morphologic abnormality)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="gastrinoma" /> <display value="GASTRINOMA" /> <target> <code value="19756007" /> <display value="Gastrinoma, malignant (morphologic abnormality)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="glucagonoma" /> <display value="GLUCAGONOMA" /> <target> <code value="66515009" /> <display value="Glucagonoma, malignant (morphologic abnormality)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="vipoma" /> <display value="VIPOMA" /> <target> <code value="31131002" /> <display value="Vipoma, malignant (morphologic abnormality)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-condition-pancreatictumourtype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-condition-pancreatictumourtype", "version": "0.1.0", "name": "GenomicsConditionPancreaticTumourType", "title": "Genomics Condition Pancreatic Tumour Type", "status": "draft", "date": "2024-06-11T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts when Condition.code field = pancreatic tumour type", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "insulinoma", "display": "INSULINOMA", "target": [ { "code": "20955008", "display": "Insulinoma, malignant (morphologic abnormality)", "equivalence": "equivalent" } ] }, { "code": "gastrinoma", "display": "GASTRINOMA", "target": [ { "code": "19756007", "display": "Gastrinoma, malignant (morphologic abnormality)", "equivalence": "equivalent" } ] }, { "code": "glucagonoma", "display": "GLUCAGONOMA", "target": [ { "code": "66515009", "display": "Glucagonoma, malignant (morphologic abnormality)", "equivalence": "equivalent" } ] }, { "code": "vipoma", "display": "VIPOMA", "target": [ { "code": "31131002", "display": "Vipoma, malignant (morphologic abnormality)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Condition Pituitary Tumour Type
Usage |
---|
ConceptMap used for the translation and recording of concepts when Condition.code field = pituitary tumour type |
HTML View
Source | Equivalence | Destination |
gh-secreting (GH-SECRETING) | equivalent | 254957009 (Somatotroph adenoma (disorder)) |
prolactinoma (PROLACTINOMA) | equivalent | 134209002 (Prolactinoma (disorder)) |
non-functioning (NON-FUNCTIONING) | equivalent | 254962005 (Functionless pituitary adenoma (disorder)) |
cushing-disease (CUSHINGS DISEASE) | equivalent | 190502001 (Pituitary-dependent Cushing's disease (disorder)) |
Table View
ConceptMap.id[0] | genomics-condition-pituitarytumourtype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-condition-pituitarytumourtype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsConditionPituitaryTumourType |
ConceptMap.title[0] | Genomics Condition Pituitary Tumour Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-11T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts when Condition.code field = pituitary tumour type |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | gh-secreting |
ConceptMap.group[0].element[0].display[0] | GH-SECRETING |
ConceptMap.group[0].element[0].target[0].code[0] | 254957009 |
ConceptMap.group[0].element[0].target[0].display[0] | Somatotroph adenoma (disorder) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | prolactinoma |
ConceptMap.group[0].element[1].display[0] | PROLACTINOMA |
ConceptMap.group[0].element[1].target[0].code[0] | 134209002 |
ConceptMap.group[0].element[1].target[0].display[0] | Prolactinoma (disorder) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | non-functioning |
ConceptMap.group[0].element[2].display[0] | NON-FUNCTIONING |
ConceptMap.group[0].element[2].target[0].code[0] | 254962005 |
ConceptMap.group[0].element[2].target[0].display[0] | Functionless pituitary adenoma (disorder) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | cushing-disease |
ConceptMap.group[0].element[3].display[0] | CUSHINGS DISEASE |
ConceptMap.group[0].element[3].target[0].code[0] | 190502001 |
ConceptMap.group[0].element[3].target[0].display[0] | Pituitary-dependent Cushing's disease (disorder) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-condition-pituitarytumourtype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-condition-pituitarytumourtype" /> <version value="0.1.0" /> <name value="GenomicsConditionPituitaryTumourType" /> <title value="Genomics Condition Pituitary Tumour Type" /> <status value="draft" /> <date value="2024-06-11T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts when Condition.code field = pituitary tumour type" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="gh-secreting" /> <display value="GH-SECRETING" /> <target> <code value="254957009" /> <display value="Somatotroph adenoma (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="prolactinoma" /> <display value="PROLACTINOMA" /> <target> <code value="134209002" /> <display value="Prolactinoma (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="non-functioning" /> <display value="NON-FUNCTIONING" /> <target> <code value="254962005" /> <display value="Functionless pituitary adenoma (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="cushing-disease" /> <display value="CUSHINGS DISEASE" /> <target> <code value="190502001" /> <display value="Pituitary-dependent Cushing's disease (disorder)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-condition-pituitarytumourtype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-condition-pituitarytumourtype", "version": "0.1.0", "name": "GenomicsConditionPituitaryTumourType", "title": "Genomics Condition Pituitary Tumour Type", "status": "draft", "date": "2024-06-11T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts when Condition.code field = pituitary tumour type", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "gh-secreting", "display": "GH-SECRETING", "target": [ { "code": "254957009", "display": "Somatotroph adenoma (disorder)", "equivalence": "equivalent" } ] }, { "code": "prolactinoma", "display": "PROLACTINOMA", "target": [ { "code": "134209002", "display": "Prolactinoma (disorder)", "equivalence": "equivalent" } ] }, { "code": "non-functioning", "display": "NON-FUNCTIONING", "target": [ { "code": "254962005", "display": "Functionless pituitary adenoma (disorder)", "equivalence": "equivalent" } ] }, { "code": "cushing-disease", "display": "CUSHINGS DISEASE", "target": [ { "code": "190502001", "display": "Pituitary-dependent Cushing's disease (disorder)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Condition Solid Tumour Type
Usage |
---|
ConceptMap used for the translation and recording of concepts for solid tumour types. This is intended for the element Condition.note |
HTML View
Source | Equivalence | Destination |
solid (SOLID) | equivalent | 35702001 (Solid (qualifier value)) |
primary (PRIMARY) | equivalent | 63161005 (Principal (qualifier value)) |
metastatic (METASTATIC) | equivalent | 1505291000004100 (Discontinuous metastatic spread (qualifier value)) |
unknown (UNKNOWN) | equivalent | 261665006 (UNKNOWN) |
Table View
ConceptMap.id[0] | genomics-condition-solidtumourtype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-condition-solidtumourtype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsConditionSolidTumourType |
ConceptMap.title[0] | Genomics Condition Solid Tumour Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-11T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for solid tumour types. This is intended for the element Condition.note |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | solid |
ConceptMap.group[0].element[0].display[0] | SOLID |
ConceptMap.group[0].element[0].target[0].code[0] | 35702001 |
ConceptMap.group[0].element[0].target[0].display[0] | Solid (qualifier value) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | primary |
ConceptMap.group[0].element[1].display[0] | PRIMARY |
ConceptMap.group[0].element[1].target[0].code[0] | 63161005 |
ConceptMap.group[0].element[1].target[0].display[0] | Principal (qualifier value) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | metastatic |
ConceptMap.group[0].element[2].display[0] | METASTATIC |
ConceptMap.group[0].element[2].target[0].code[0] | 1505291000004100 |
ConceptMap.group[0].element[2].target[0].display[0] | Discontinuous metastatic spread (qualifier value) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | unknown |
ConceptMap.group[0].element[3].display[0] | UNKNOWN |
ConceptMap.group[0].element[3].target[0].code[0] | 261665006 |
ConceptMap.group[0].element[3].target[0].display[0] | UNKNOWN |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-condition-solidtumourtype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-condition-solidtumourtype" /> <version value="0.1.0" /> <name value="GenomicsConditionSolidTumourType" /> <title value="Genomics Condition Solid Tumour Type" /> <status value="draft" /> <date value="2024-06-11T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for solid tumour types. This is intended for the element Condition.note" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="solid" /> <display value="SOLID" /> <target> <code value="35702001" /> <display value="Solid (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="primary" /> <display value="PRIMARY" /> <target> <code value="63161005" /> <display value="Principal (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="metastatic" /> <display value="METASTATIC" /> <target> <code value="1505291000004100" /> <display value="Discontinuous metastatic spread (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="unknown" /> <display value="UNKNOWN" /> <target> <code value="261665006" /> <display value="UNKNOWN" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-condition-solidtumourtype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-condition-solidtumourtype", "version": "0.1.0", "name": "GenomicsConditionSolidTumourType", "title": "Genomics Condition Solid Tumour Type", "status": "draft", "date": "2024-06-11T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for solid tumour types. This is intended for the element Condition.note", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "solid", "display": "SOLID", "target": [ { "code": "35702001", "display": "Solid (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "primary", "display": "PRIMARY", "target": [ { "code": "63161005", "display": "Principal (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "metastatic", "display": "METASTATIC", "target": [ { "code": "1505291000004100", "display": "Discontinuous metastatic spread (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "unknown", "display": "UNKNOWN", "target": [ { "code": "261665006", "display": "UNKNOWN", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Specimen Tumour Cellularity
Usage |
---|
ConceptMap used for the translation and recording of concepts for the proportion of tumour cellularity. This is intended for the element Observation.valueCodeableConcept. |
HTML View
to http://snomed.info/sct?fhir_vs=ecl/%3C!%20362981000%20
Source | Equivalence | Destination |
high (High) | equivalent | 75540009 (High (qualifier value)) |
low (Low) | equivalent | 62482003 (Low (qualifier value)) |
medium (Medium) | equivalent | 255508009 (Medium (qualifier value)) |
very-high (Very High) | equivalent | 260360000 (Very high (qualifier value)) |
very-low (Very Low) | equivalent | 260360000 (Very low (qualifier value)) |
Table View
ConceptMap.id[0] | genomics-specimen-tumourcellularity |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-specimen-tumourcellularity |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsSpecimenTumourCellularity |
ConceptMap.title[0] | Genomics Specimen Tumour Cellularity |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-05T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for the proportion of tumour cellularity. This is intended for the element Observation.valueCodeableConcept. |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=ecl/%3C!%20362981000%20 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | high |
ConceptMap.group[0].element[0].display[0] | High |
ConceptMap.group[0].element[0].target[0].code[0] | 75540009 |
ConceptMap.group[0].element[0].target[0].display[0] | High (qualifier value) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | low |
ConceptMap.group[0].element[1].display[0] | Low |
ConceptMap.group[0].element[1].target[0].code[0] | 62482003 |
ConceptMap.group[0].element[1].target[0].display[0] | Low (qualifier value) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | medium |
ConceptMap.group[0].element[2].display[0] | Medium |
ConceptMap.group[0].element[2].target[0].code[0] | 255508009 |
ConceptMap.group[0].element[2].target[0].display[0] | Medium (qualifier value) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | very-high |
ConceptMap.group[0].element[3].display[0] | Very High |
ConceptMap.group[0].element[3].target[0].code[0] | 260360000 |
ConceptMap.group[0].element[3].target[0].display[0] | Very high (qualifier value) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | very-low |
ConceptMap.group[0].element[4].display[0] | Very Low |
ConceptMap.group[0].element[4].target[0].code[0] | 260360000 |
ConceptMap.group[0].element[4].target[0].display[0] | Very low (qualifier value) |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-specimen-tumourcellularity" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-specimen-tumourcellularity" /> <version value="0.1.0" /> <name value="GenomicsSpecimenTumourCellularity" /> <title value="Genomics Specimen Tumour Cellularity" /> <status value="draft" /> <date value="2024-08-05T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for the proportion of tumour cellularity. This is intended for the element Observation.valueCodeableConcept." /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C!%20362981000%20" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="high" /> <display value="High" /> <target> <code value="75540009" /> <display value="High (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="low" /> <display value="Low" /> <target> <code value="62482003" /> <display value="Low (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="medium" /> <display value="Medium" /> <target> <code value="255508009" /> <display value="Medium (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="very-high" /> <display value="Very High" /> <target> <code value="260360000" /> <display value="Very high (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="very-low" /> <display value="Very Low" /> <target> <code value="260360000" /> <display value="Very low (qualifier value)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-specimen-tumourcellularity", "url": "https://fhir.nhs.uk/ConceptMap/genomics-specimen-tumourcellularity", "version": "0.1.0", "name": "GenomicsSpecimenTumourCellularity", "title": "Genomics Specimen Tumour Cellularity", "status": "draft", "date": "2024-08-05T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for the proportion of tumour cellularity. This is intended for the element Observation.valueCodeableConcept.", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C!%20362981000%20", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "high", "display": "High", "target": [ { "code": "75540009", "display": "High (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "low", "display": "Low", "target": [ { "code": "62482003", "display": "Low (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "medium", "display": "Medium", "target": [ { "code": "255508009", "display": "Medium (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "very-high", "display": "Very High", "target": [ { "code": "260360000", "display": "Very high (qualifier value)", "equivalence": "equivalent" } ] }, { "code": "very-low", "display": "Very Low", "target": [ { "code": "260360000", "display": "Very low (qualifier value)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Patient Birth Sex
Usage |
---|
ConceptMap used for the translation and recording of concept for sexual identity assigned to patient at birth. This is intended for the element Patient.extension:birthSex |
HTML View
Table View
ConceptMap.id[0] | genomics-patientbirthsex |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-patientbirthsex |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsPatientBirthSex |
ConceptMap.title[0] | Genomics Patient Birth Sex |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-28T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concept for sexual identity assigned to patient at birth. This is intended for the element Patient.extension:birthSex |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | https://fhir.hl7.org.uk/ValueSet/UKCore-BirthSex |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://terminology.hl7.org/CodeSystem/v3-AdministrativeGender |
ConceptMap.group[0].element[0].code[0] | male |
ConceptMap.group[0].element[0].display[0] | MALE |
ConceptMap.group[0].element[0].target[0].code[0] | M |
ConceptMap.group[0].element[0].target[0].display[0] | Male |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | female |
ConceptMap.group[0].element[1].display[0] | FEMALE |
ConceptMap.group[0].element[1].target[0].code[0] | F |
ConceptMap.group[0].element[1].target[0].display[0] | Female |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | indeterminate |
ConceptMap.group[0].element[2].display[0] | INDETERMINATE |
ConceptMap.group[0].element[2].target[0].code[0] | UN |
ConceptMap.group[0].element[2].target[0].display[0] | Undifferentiated |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-patientbirthsex" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-patientbirthsex" /> <version value="0.1.0" /> <name value="GenomicsPatientBirthSex" /> <title value="Genomics Patient Birth Sex" /> <status value="draft" /> <date value="2024-06-28T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concept for sexual identity assigned to patient at birth. This is intended for the element Patient.extension:birthSex" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="https://fhir.hl7.org.uk/ValueSet/UKCore-BirthSex" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://terminology.hl7.org/CodeSystem/v3-AdministrativeGender" /> <element> <code value="male" /> <display value="MALE" /> <target> <code value="M" /> <display value="Male" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="female" /> <display value="FEMALE" /> <target> <code value="F" /> <display value="Female" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="indeterminate" /> <display value="INDETERMINATE" /> <target> <code value="UN" /> <display value="Undifferentiated" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-patientbirthsex", "url": "https://fhir.nhs.uk/ConceptMap/genomics-patientbirthsex", "version": "0.1.0", "name": "GenomicsPatientBirthSex", "title": "Genomics Patient Birth Sex", "status": "draft", "date": "2024-06-28T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concept for sexual identity assigned to patient at birth. This is intended for the element Patient.extension:birthSex", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "https://fhir.hl7.org.uk/ValueSet/UKCore-BirthSex", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://terminology.hl7.org/CodeSystem/v3-AdministrativeGender", "element": [ { "code": "male", "display": "MALE", "target": [ { "code": "M", "display": "Male", "equivalence": "equivalent" } ] }, { "code": "female", "display": "FEMALE", "target": [ { "code": "F", "display": "Female", "equivalence": "equivalent" } ] }, { "code": "indeterminate", "display": "INDETERMINATE", "target": [ { "code": "UN", "display": "Undifferentiated", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Patient Born Status
Usage |
---|
ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus |
HTML View
to http://hl7.org/fhir/ValueSet/patient-fetalstatus
Source | Equivalence | Destination | Comment |
fetal (Fetal) | equivalent | potential-for-live-birth (Potential For Live Birth) | |
unregisteredneonate (Unregistered Neonate) | unmatched | No suitable SNOMDED CT code is found. This should be captured by recording the birthDate on the Patient resource (Patient.birthDate). |
Table View
ConceptMap.id[0] | genomics-patient-bornstatus |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-patient-bornstatus |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsPatientBornStatus |
ConceptMap.title[0] | Genomics Patient Born Status |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-19T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://hl7.org/fhir/ValueSet/patient-fetalstatus |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://hl7.org/fhir/patient-fetalstatus |
ConceptMap.group[0].element[0].code[0] | fetal |
ConceptMap.group[0].element[0].display[0] | Fetal |
ConceptMap.group[0].element[0].target[0].code[0] | potential-for-live-birth |
ConceptMap.group[0].element[0].target[0].display[0] | Potential For Live Birth |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | unregisteredneonate |
ConceptMap.group[0].element[1].display[0] | Unregistered Neonate |
ConceptMap.group[0].element[1].target[0].equivalence[0] | unmatched |
ConceptMap.group[0].element[1].target[0].comment[0] | No suitable SNOMDED CT code is found. This should be captured by recording the birthDate on the Patient resource (Patient.birthDate). |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-patient-bornstatus" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-patient-bornstatus" /> <version value="0.1.0" /> <name value="GenomicsPatientBornStatus" /> <title value="Genomics Patient Born Status" /> <status value="draft" /> <date value="2024-08-19T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://hl7.org/fhir/ValueSet/patient-fetalstatus" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://hl7.org/fhir/patient-fetalstatus" /> <element> <code value="fetal" /> <display value="Fetal" /> <target> <code value="potential-for-live-birth" /> <display value="Potential For Live Birth" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="unregisteredneonate" /> <display value="Unregistered Neonate" /> <target> <equivalence value="unmatched" /> <comment value="No suitable SNOMDED CT code is found. This should be captured by recording the birthDate on the Patient resource (Patient.birthDate)." /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-patient-bornstatus", "url": "https://fhir.nhs.uk/ConceptMap/genomics-patient-bornstatus", "version": "0.1.0", "name": "GenomicsPatientBornStatus", "title": "Genomics Patient Born Status", "status": "draft", "date": "2024-08-19T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://hl7.org/fhir/ValueSet/patient-fetalstatus", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://hl7.org/fhir/patient-fetalstatus", "element": [ { "code": "fetal", "display": "Fetal", "target": [ { "code": "potential-for-live-birth", "display": "Potential For Live Birth", "equivalence": "equivalent" } ] }, { "code": "unregisteredneonate", "display": "Unregistered Neonate", "target": [ { "equivalence": "unmatched", "comment": "No suitable SNOMDED CT code is found. This should be captured by recording the birthDate on the Patient resource (Patient.birthDate)." } ] } ] } ] }
ConceptMap Genomic Foetus Observed Sex
Usage |
---|
ConceptMap used for the translation and recording of concepts for the patient gender if the patient is identify as fetal. This is intended for the element Patient.gender |
HTML View
Source | Equivalence | Destination | Comment |
female (Female) | equivalent | female (Female) | |
male (Male) | equivalent | male (Male) | |
undetermined (Undetermined) | inexact | other (Other) | The relationship here should be recorded as inexact, this is the only relevant concept from the required CodeSystem |
unknown (Unknown) | equivalent | unknown (Unknown) |
Table View
ConceptMap.id[0] | genomics-foetusobservedsex |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-foetusobservedsex |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsFoetusObservedSex |
ConceptMap.title[0] | Genomics Foetus Observed Sex |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-19T16:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for the patient gender if the patient is identify as fetal. This is intended for the element Patient.gender |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://hl7.org/fhir/ValueSet/administrative-gender |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://hl7.org/fhir/administrative-gender |
ConceptMap.group[0].element[0].code[0] | female |
ConceptMap.group[0].element[0].display[0] | Female |
ConceptMap.group[0].element[0].target[0].code[0] | female |
ConceptMap.group[0].element[0].target[0].display[0] | Female |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | male |
ConceptMap.group[0].element[1].display[0] | Male |
ConceptMap.group[0].element[1].target[0].code[0] | male |
ConceptMap.group[0].element[1].target[0].display[0] | Male |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | undetermined |
ConceptMap.group[0].element[2].display[0] | Undetermined |
ConceptMap.group[0].element[2].target[0].code[0] | other |
ConceptMap.group[0].element[2].target[0].display[0] | Other |
ConceptMap.group[0].element[2].target[0].equivalence[0] | inexact |
ConceptMap.group[0].element[2].target[0].comment[0] | The relationship here should be recorded as inexact, this is the only relevant concept from the required CodeSystem |
ConceptMap.group[0].element[3].code[0] | unknown |
ConceptMap.group[0].element[3].display[0] | Unknown |
ConceptMap.group[0].element[3].target[0].code[0] | unknown |
ConceptMap.group[0].element[3].target[0].display[0] | Unknown |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-foetusobservedsex" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-foetusobservedsex" /> <version value="0.1.0" /> <name value="GenomicsFoetusObservedSex" /> <title value="Genomics Foetus Observed Sex" /> <status value="draft" /> <date value="2024-08-19T16:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for the patient gender if the patient is identify as fetal. This is intended for the element Patient.gender" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://hl7.org/fhir/ValueSet/administrative-gender" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://hl7.org/fhir/administrative-gender" /> <element> <code value="female" /> <display value="Female" /> <target> <code value="female" /> <display value="Female" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="male" /> <display value="Male" /> <target> <code value="male" /> <display value="Male" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="undetermined" /> <display value="Undetermined" /> <target> <code value="other" /> <display value="Other" /> <equivalence value="inexact" /> <comment value="The relationship here should be recorded as inexact, this is the only relevant concept from the required CodeSystem" /> </target> </element> <element> <code value="unknown" /> <display value="Unknown" /> <target> <code value="unknown" /> <display value="Unknown" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-foetusobservedsex", "url": "https://fhir.nhs.uk/ConceptMap/genomics-foetusobservedsex", "version": "0.1.0", "name": "GenomicsFoetusObservedSex", "title": "Genomics Foetus Observed Sex", "status": "draft", "date": "2024-08-19T16:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for the patient gender if the patient is identify as fetal. This is intended for the element Patient.gender", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://hl7.org/fhir/ValueSet/administrative-gender", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://hl7.org/fhir/administrative-gender", "element": [ { "code": "female", "display": "Female", "target": [ { "code": "female", "display": "Female", "equivalence": "equivalent" } ] }, { "code": "male", "display": "Male", "target": [ { "code": "male", "display": "Male", "equivalence": "equivalent" } ] }, { "code": "undetermined", "display": "Undetermined", "target": [ { "code": "other", "display": "Other", "equivalence": "inexact", "comment": "The relationship here should be recorded as inexact, this is the only relevant concept from the required CodeSystem" } ] }, { "code": "unknown", "display": "Unknown", "target": [ { "code": "unknown", "display": "Unknown", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Report Delivery Method
Usage |
---|
ConceptMap used for the translation and recording of Genomics report delivery options. This is intended for the element PractitionerRole.telecom.value. The preferred delivery method will be indicated by rank=1 for the associated ContactPoint |
HTML View
Table View
ConceptMap.id[0] | genomics-reportdeliverymethod |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-reportdeliverymethod |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsReportDeliveryMethod |
ConceptMap.title[0] | Genomics Report Delivery Method |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-27T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of Genomics report delivery options. This is intended for the element PractitionerRole.telecom.value. The preferred delivery method will be indicated by rank=1 for the associated ContactPoint |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://hl7.org/fhir/ValueSet/contact-point-system |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://hl7.org/fhir/contact-point-system |
ConceptMap.group[0].element[0].code[0] | postal |
ConceptMap.group[0].element[0].display[0] | POSTAL |
ConceptMap.group[0].element[0].target[0].equivalence[0] | unmatched |
ConceptMap.group[0].element[0].target[0].comment[0] | The postal address will be captured under PractitionerRole.organization (retrieved from ODS) |
ConceptMap.group[0].element[1].code[0] | digital-system |
ConceptMap.group[0].element[1].display[0] | DIGITAL SYSTEM |
ConceptMap.group[0].element[1].target[0].code[0] | url |
ConceptMap.group[0].element[1].target[0].display[0] | URL |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | |
ConceptMap.group[0].element[2].display[0] | |
ConceptMap.group[0].element[2].target[0].code[0] | |
ConceptMap.group[0].element[2].target[0].display[0] | |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | other |
ConceptMap.group[0].element[3].display[0] | OTHER |
ConceptMap.group[0].element[3].target[0].code[0] | other |
ConceptMap.group[0].element[3].target[0].display[0] | Other |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-reportdeliverymethod" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-reportdeliverymethod" /> <version value="0.1.0" /> <name value="GenomicsReportDeliveryMethod" /> <title value="Genomics Report Delivery Method" /> <status value="draft" /> <date value="2024-06-27T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of Genomics report delivery options. This is intended for the element PractitionerRole.telecom.value. The preferred delivery method will be indicated by rank=1 for the associated ContactPoint" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://hl7.org/fhir/ValueSet/contact-point-system" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://hl7.org/fhir/contact-point-system" /> <element> <code value="postal" /> <display value="POSTAL" /> <target> <equivalence value="unmatched" /> <comment value="The postal address will be captured under PractitionerRole.organization (retrieved from ODS)" /> </target> </element> <element> <code value="digital-system" /> <display value="DIGITAL SYSTEM" /> <target> <code value="url" /> <display value="URL" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="email" /> <display value="EMAIL" /> <target> <code value="email" /> <display value="Email" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="other" /> <display value="OTHER" /> <target> <code value="other" /> <display value="Other" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-reportdeliverymethod", "url": "https://fhir.nhs.uk/ConceptMap/genomics-reportdeliverymethod", "version": "0.1.0", "name": "GenomicsReportDeliveryMethod", "title": "Genomics Report Delivery Method", "status": "draft", "date": "2024-06-27T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of Genomics report delivery options. This is intended for the element PractitionerRole.telecom.value. The preferred delivery method will be indicated by rank=1 for the associated ContactPoint", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://hl7.org/fhir/ValueSet/contact-point-system", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://hl7.org/fhir/contact-point-system", "element": [ { "code": "postal", "display": "POSTAL", "target": [ { "equivalence": "unmatched", "comment": "The postal address will be captured under PractitionerRole.organization (retrieved from ODS)" } ] }, { "code": "digital-system", "display": "DIGITAL SYSTEM", "target": [ { "code": "url", "display": "URL", "equivalence": "equivalent" } ] }, { "code": "email", "display": "EMAIL", "target": [ { "code": "email", "display": "Email", "equivalence": "equivalent" } ] }, { "code": "other", "display": "OTHER", "target": [ { "code": "other", "display": "Other", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Patient Pregnancy Type
Usage |
---|
ConceptMap used for the translation and recording of concepts for patient types of conception. This is intended for the element Procedure.code |
HTML View
to http://snomed.info/sct?fhir_vs=isa/138875005
Source | Equivalence | Destination |
spontaneous-conception (SPONTANEOUS CONCEPTION) | equivalent | 1372941000168104 (Spontaneous conception) |
iui-partners-sperm (IUI PARTNERS SPERM) | equivalent | 426389008 (Intrauterine insemination using partner sperm) |
iui-donor-sperm (IUI DONOR SPERM) | equivalent | 426250000 (Intrauterine insemination using donor sperm) |
ivf-own-egg (IVF OWN EGG) | subsumes | 52637005 (In vitro fertilisation) |
ivf-donor-egg (IVF DONOR EGG) | equivalent | 425866000 (In vitro fertilisation using donor eggs) |
ivf-partners-sperm (IVF PARTNERS SPERM) | subsumes | 52637005 (In vitro fertilisation) |
ivf-donor-sperm (IVF DONOR SPERM) | equivalent | 427664000 (IVF - In vitro fertilisation using donor sperm) |
Table View
ConceptMap.id[0] | genomics-patientpregnancytype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-patientpregnancytype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsPatientPregnancyType |
ConceptMap.title[0] | Genomics Patient Pregnancy Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-07-04T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for patient types of conception. This is intended for the element Procedure.code |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=isa/138875005 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | spontaneous-conception |
ConceptMap.group[0].element[0].display[0] | SPONTANEOUS CONCEPTION |
ConceptMap.group[0].element[0].target[0].code[0] | 1372941000168104 |
ConceptMap.group[0].element[0].target[0].display[0] | Spontaneous conception |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | iui-partners-sperm |
ConceptMap.group[0].element[1].display[0] | IUI PARTNERS SPERM |
ConceptMap.group[0].element[1].target[0].code[0] | 426389008 |
ConceptMap.group[0].element[1].target[0].display[0] | Intrauterine insemination using partner sperm |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | iui-donor-sperm |
ConceptMap.group[0].element[2].display[0] | IUI DONOR SPERM |
ConceptMap.group[0].element[2].target[0].code[0] | 426250000 |
ConceptMap.group[0].element[2].target[0].display[0] | Intrauterine insemination using donor sperm |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | ivf-own-egg |
ConceptMap.group[0].element[3].display[0] | IVF OWN EGG |
ConceptMap.group[0].element[3].target[0].code[0] | 52637005 |
ConceptMap.group[0].element[3].target[0].display[0] | In vitro fertilisation |
ConceptMap.group[0].element[3].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[4].code[0] | ivf-donor-egg |
ConceptMap.group[0].element[4].display[0] | IVF DONOR EGG |
ConceptMap.group[0].element[4].target[0].code[0] | 425866000 |
ConceptMap.group[0].element[4].target[0].display[0] | In vitro fertilisation using donor eggs |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | ivf-partners-sperm |
ConceptMap.group[0].element[5].display[0] | IVF PARTNERS SPERM |
ConceptMap.group[0].element[5].target[0].code[0] | 52637005 |
ConceptMap.group[0].element[5].target[0].display[0] | In vitro fertilisation |
ConceptMap.group[0].element[5].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[6].code[0] | ivf-donor-sperm |
ConceptMap.group[0].element[6].display[0] | IVF DONOR SPERM |
ConceptMap.group[0].element[6].target[0].code[0] | 427664000 |
ConceptMap.group[0].element[6].target[0].display[0] | IVF - In vitro fertilisation using donor sperm |
ConceptMap.group[0].element[6].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-patientpregnancytype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-patientpregnancytype" /> <version value="0.1.0" /> <name value="GenomicsPatientPregnancyType" /> <title value="Genomics Patient Pregnancy Type" /> <status value="draft" /> <date value="2024-07-04T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for patient types of conception. This is intended for the element Procedure.code" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=isa/138875005" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="spontaneous-conception" /> <display value="SPONTANEOUS CONCEPTION" /> <target> <code value="1372941000168104" /> <display value="Spontaneous conception" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="iui-partners-sperm" /> <display value="IUI PARTNERS SPERM" /> <target> <code value="426389008" /> <display value="Intrauterine insemination using partner sperm" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="iui-donor-sperm" /> <display value="IUI DONOR SPERM" /> <target> <code value="426250000" /> <display value="Intrauterine insemination using donor sperm" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="ivf-own-egg" /> <display value="IVF OWN EGG" /> <target> <code value="52637005" /> <display value="In vitro fertilisation" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="ivf-donor-egg" /> <display value="IVF DONOR EGG" /> <target> <code value="425866000" /> <display value="In vitro fertilisation using donor eggs" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="ivf-partners-sperm" /> <display value="IVF PARTNERS SPERM" /> <target> <code value="52637005" /> <display value="In vitro fertilisation" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="ivf-donor-sperm" /> <display value="IVF DONOR SPERM" /> <target> <code value="427664000" /> <display value="IVF - In vitro fertilisation using donor sperm" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-patientpregnancytype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-patientpregnancytype", "version": "0.1.0", "name": "GenomicsPatientPregnancyType", "title": "Genomics Patient Pregnancy Type", "status": "draft", "date": "2024-07-04T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for patient types of conception. This is intended for the element Procedure.code", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=isa/138875005", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "spontaneous-conception", "display": "SPONTANEOUS CONCEPTION", "target": [ { "code": "1372941000168104", "display": "Spontaneous conception", "equivalence": "equivalent" } ] }, { "code": "iui-partners-sperm", "display": "IUI PARTNERS SPERM", "target": [ { "code": "426389008", "display": "Intrauterine insemination using partner sperm", "equivalence": "equivalent" } ] }, { "code": "iui-donor-sperm", "display": "IUI DONOR SPERM", "target": [ { "code": "426250000", "display": "Intrauterine insemination using donor sperm", "equivalence": "equivalent" } ] }, { "code": "ivf-own-egg", "display": "IVF OWN EGG", "target": [ { "code": "52637005", "display": "In vitro fertilisation", "equivalence": "subsumes" } ] }, { "code": "ivf-donor-egg", "display": "IVF DONOR EGG", "target": [ { "code": "425866000", "display": "In vitro fertilisation using donor eggs", "equivalence": "equivalent" } ] }, { "code": "ivf-partners-sperm", "display": "IVF PARTNERS SPERM", "target": [ { "code": "52637005", "display": "In vitro fertilisation", "equivalence": "subsumes" } ] }, { "code": "ivf-donor-sperm", "display": "IVF DONOR SPERM", "target": [ { "code": "427664000", "display": "IVF - In vitro fertilisation using donor sperm", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Procedure Transfusion Type
Usage |
---|
ConceptMap used for the translation and recording of concept for type of transfusion procedure that a patient may undergo. .i.e, value for procedure.code field |
HTML View
to http://snomed.info/sct?fhir_vs=ecl/%3C%3C%205447007%20
Source | Equivalence | Destination |
packed-red-blood-cells (Packed Red Blood Cells) | equivalent | 71493000 (Transfusion of packed red blood cells (procedure)) |
plasma (Plasma) | equivalent | 13569004 (Transfusion of plasma (procedure)) |
platelets (Platelets) | equivalent | 12719002 (Platelet transfusion (procedure)) |
unknown (UNKNOWN) | specializes | 5447007 (Transfusion (procedure)) |
Table View
ConceptMap.id[0] | genomics-procedure-transfusiontype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-procedure-transfusiontype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsProcedureTransfusionType |
ConceptMap.title[0] | Genomics Procedure Transfusion Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-07-12T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concept for type of transfusion procedure that a patient may undergo. .i.e, value for procedure.code field |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=ecl/%3C%3C%205447007%20 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | packed-red-blood-cells |
ConceptMap.group[0].element[0].display[0] | Packed Red Blood Cells |
ConceptMap.group[0].element[0].target[0].code[0] | 71493000 |
ConceptMap.group[0].element[0].target[0].display[0] | Transfusion of packed red blood cells (procedure) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | plasma |
ConceptMap.group[0].element[1].display[0] | Plasma |
ConceptMap.group[0].element[1].target[0].code[0] | 13569004 |
ConceptMap.group[0].element[1].target[0].display[0] | Transfusion of plasma (procedure) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | platelets |
ConceptMap.group[0].element[2].display[0] | Platelets |
ConceptMap.group[0].element[2].target[0].code[0] | 12719002 |
ConceptMap.group[0].element[2].target[0].display[0] | Platelet transfusion (procedure) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | unknown |
ConceptMap.group[0].element[3].display[0] | UNKNOWN |
ConceptMap.group[0].element[3].target[0].code[0] | 5447007 |
ConceptMap.group[0].element[3].target[0].display[0] | Transfusion (procedure) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | specializes |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-procedure-transfusiontype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-procedure-transfusiontype" /> <version value="0.1.0" /> <name value="GenomicsProcedureTransfusionType" /> <title value="Genomics Procedure Transfusion Type" /> <status value="draft" /> <date value="2024-07-12T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concept for type of transfusion procedure that a patient may undergo. .i.e, value for procedure.code field" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%205447007%20" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="packed-red-blood-cells" /> <display value="Packed Red Blood Cells" /> <target> <code value="71493000" /> <display value="Transfusion of packed red blood cells (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="plasma" /> <display value="Plasma" /> <target> <code value="13569004" /> <display value="Transfusion of plasma (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="platelets" /> <display value="Platelets" /> <target> <code value="12719002" /> <display value="Platelet transfusion (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="unknown" /> <display value="UNKNOWN" /> <target> <code value="5447007" /> <display value="Transfusion (procedure)" /> <equivalence value="specializes" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-procedure-transfusiontype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-procedure-transfusiontype", "version": "0.1.0", "name": "GenomicsProcedureTransfusionType", "title": "Genomics Procedure Transfusion Type", "status": "draft", "date": "2024-07-12T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concept for type of transfusion procedure that a patient may undergo. .i.e, value for procedure.code field ", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C%3C%205447007%20", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "packed-red-blood-cells", "display": "Packed Red Blood Cells", "target": [ { "code": "71493000", "display": "Transfusion of packed red blood cells (procedure)", "equivalence": "equivalent" } ] }, { "code": "plasma", "display": "Plasma", "target": [ { "code": "13569004", "display": "Transfusion of plasma (procedure)", "equivalence": "equivalent" } ] }, { "code": "platelets", "display": "Platelets", "target": [ { "code": "12719002", "display": "Platelet transfusion (procedure)", "equivalence": "equivalent" } ] }, { "code": "unknown", "display": "UNKNOWN", "target": [ { "code": "5447007", "display": "Transfusion (procedure)", "equivalence": "specializes" } ] } ] } ] }
ConceptMap Genomic Type of Transplant Procedure
Usage |
---|
ConceptMap used for the translation and recording concepts for transplantation procedure. This is intended for the element Procedure.code |
HTML View
Source Concept | Equivalence | Destination Concept | Comment |
Code [https://future.nhs.uk/NHSgenomics/view?objectId=222250117] | Code [http://snomed.info/sct] | ||
bilateral-single-lung (BILATERAL SINGLE LUNG) | :Equivalent | 232660006 (Bilateral sequential single lung transplant (procedure)) | |
bone-marrow (BONE MARROW) | :Equivalent | 23719005 (Transplantation of bone marrow (procedure)) | |
double-kidney (DOUBLE KIDNEY) | :Narrower | 70536003 (Transplant of kidney (procedure)) | When this concept is used, further notes should be provided that this transplation procedure is for double kidney. Respective procedures should be recorded in a separate Procedure resource. |
double-lung (DOUBLE LUNG) | :Equivalent | 232658009 (Double lung transplant (procedure)) | |
enbloc-kidney (EN-BLOCKIDNEY) | :Unmatched | This concept should be recored by free text under Procedure.code. No suitable SNOMED CT code existed for it at this time but process are being iniated to ensure the SNOMED Team added it to the SNOMED Vocab. | |
heart (HEART) | :Equivalent | 32413006 (Transplantation of heart (procedure)) | |
heart-and-kidney (HEART AND KIDNEY) | :Narrower | 32413006 (Transplantation of heart (procedure)) | When this concept is used, further notes should be provided to state that this transplantation procedure is for a combined heart and kidney transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
heart-and-liver (HEART AND LIVER) | :Narrower | 32413006 (Transplantation of heart (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
heart-lung (HEART LUNG) | :Equivalent | 32477003 (Heart and lung transplant) | |
heart-lung-and-kidney (HEART LUNG AND KIDNEY) | :Narrower | 32413006 (Transplantation of heart (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
heart-lung-and-liver (HEART LUNG AND LIVER) | :Narrower | 32413006 (Transplantation of heart (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
if-liver-bowel-pancreas (IF LIVER BOWEL PANCREAS) | :Narrower | 18027006 (Transplantation of liver (procedure)) | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
if-liver-only (IF LIVER ONLY) | :Equivalent | 18027006 (Transplantation of liver (procedure)) | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource. |
if-multivisceral (IF MULTIVISCERAL) | :Equivalent | 118158008 (Gastrointestinal tract transplantation (procedure)) | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource. |
kidney (KIDNEY) | :Equivalent | 70536003 (Transplant of kidney (procedure)) | |
kidney-and-pancreas (KIDNEY AND PANCREAS) | :Equivalent | 6471000179103 (Transplantation of kidney and pancreas (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
kidney-and-pancreas-islets (KIDNEY AND PANCREAS ISLETS) | :Narrower | 70536003 (Transplant of kidney (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
liver (LIVER) | :Equivalent | 18027006 (Transplantation of liver (procedure)) | |
liver-and-kidney (LIVER AND KIDNEY) | :Narrower | 18027006 (Transplantation of liver (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
liver-and-pancreas (LIVER AND PANCREAS) | :Narrower | 18027006 (Transplantation of liver (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
liver-kidney-and-pancreas (LIVER KIDNEY AND PANCREAS) | :Narrower | 18027006 (Transplantation of liver (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
lung (LUNG) | :Equivalent | 88039007 (Transplant of lung (procedure)) | |
lung-and-kidney (LUNG AND KIDNEY) | :Narrower | 88039007 (Transplant of lung (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
lung-and-kidney-and-liver (LUNG AND KIDNEY AND LIVER) | :Narrower | 88039007 (Transplant of lung (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
lung-and-liver (LUNG AND LIVER) | :Narrower | 88039007 (Transplant of lung (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ocular-tissue (OCULAR TISSUE) | :Wider | 120095006 (Eye structure transplantation (procedure)) | |
pancreas (PANCREAS ONLY) | :Equivalent | 62438007 (Transplantation of pancreas (procedure)) | |
pancreas-and-liver (PANCREAS AND LIVER) | :Narrower | 62438007 (Transplantation of pancreas (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
pancreas-islets (PANCREAS ISLETS) | :Narrower | 62438007 (Transplantation of pancreas (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
pancreas-kidney (PANCREAS KIDNEY) | :Equivalent | 6471000179103 (Transplantation of kidney and pancreas (procedure)) | |
pancreas-liver-and-kidney (PANCREAS LIVER AND KIDNEY) | :Narrower | 62438007 (Transplantation of pancreas (procedure)) | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
partial-lung (PARTIAL LUNG) | :Equivalent | 429332008 (Transplantation of single lobe of lung (procedure)) | |
stem-cell (STEM CELL) | :Equivalent | 285581000000102 (Transplantation of stem cells (procedure)) |
Table View
ConceptMap.id[0] | genomics-typeof-transplantprocedure |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-typeof-transplantprocedure |
ConceptMap.version[0] | 0.0.1 |
ConceptMap.name[0] | GenomicsTypeofTransplantProcedure |
ConceptMap.title[0] | Genomics Type of Transplant Procedure |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-12T17:40:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording concepts for transplantation procedure. This is intended for the element Procedure.code |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | bilateral-single-lung |
ConceptMap.group[0].element[0].display[0] | BILATERAL SINGLE LUNG |
ConceptMap.group[0].element[0].target[0].code[0] | 232660006 |
ConceptMap.group[0].element[0].target[0].display[0] | Bilateral sequential single lung transplant (procedure) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | bone-marrow |
ConceptMap.group[0].element[1].display[0] | BONE MARROW |
ConceptMap.group[0].element[1].target[0].code[0] | 23719005 |
ConceptMap.group[0].element[1].target[0].display[0] | Transplantation of bone marrow (procedure) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | double-kidney |
ConceptMap.group[0].element[2].display[0] | DOUBLE KIDNEY |
ConceptMap.group[0].element[2].target[0].code[0] | 70536003 |
ConceptMap.group[0].element[2].target[0].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[2].target[0].comment[0] | When this concept is used, further notes should be provided that this transplation procedure is for double kidney. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[3].code[0] | double-lung |
ConceptMap.group[0].element[3].display[0] | DOUBLE LUNG |
ConceptMap.group[0].element[3].target[0].code[0] | 232658009 |
ConceptMap.group[0].element[3].target[0].display[0] | Double lung transplant (procedure) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | enbloc-kidney |
ConceptMap.group[0].element[4].display[0] | EN-BLOCKIDNEY |
ConceptMap.group[0].element[4].target[0].equivalence[0] | unmatched |
ConceptMap.group[0].element[4].target[0].comment[0] | This concept should be recored by free text under Procedure.code. No suitable SNOMED CT code existed for it at this time but process are being iniated to ensure the SNOMED Team added it to the SNOMED Vocab. |
ConceptMap.group[0].element[5].code[0] | heart |
ConceptMap.group[0].element[5].display[0] | HEART |
ConceptMap.group[0].element[5].target[0].code[0] | 32413006 |
ConceptMap.group[0].element[5].target[0].display[0] | Transplantation of heart (procedure) |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | heart-and-kidney |
ConceptMap.group[0].element[6].display[0] | HEART AND KIDNEY |
ConceptMap.group[0].element[6].target[0].code[0] | 32413006 |
ConceptMap.group[0].element[6].target[0].display[0] | Transplantation of heart (procedure) |
ConceptMap.group[0].element[6].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[6].target[0].comment[0] | When this concept is used, further notes should be provided to state that this transplantation procedure is for a combined heart and kidney transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[6].target[1].code[0] | 70536003 |
ConceptMap.group[0].element[6].target[1].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[6].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[6].target[1].comment[0] | When this concept is used, further notes should be provided to state that this transplantation procedure is for combined heart and kidney procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[7].code[0] | heart-and-liver |
ConceptMap.group[0].element[7].display[0] | HEART AND LIVER |
ConceptMap.group[0].element[7].target[0].code[0] | 32413006 |
ConceptMap.group[0].element[7].target[0].display[0] | Transplantation of heart (procedure) |
ConceptMap.group[0].element[7].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[7].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[7].target[1].code[0] | 18027006 |
ConceptMap.group[0].element[7].target[1].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[7].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[7].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[8].code[0] | heart-lung |
ConceptMap.group[0].element[8].display[0] | HEART LUNG |
ConceptMap.group[0].element[8].target[0].code[0] | 32477003 |
ConceptMap.group[0].element[8].target[0].display[0] | Heart and lung transplant |
ConceptMap.group[0].element[8].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[9].code[0] | heart-lung-and-kidney |
ConceptMap.group[0].element[9].display[0] | HEART LUNG AND KIDNEY |
ConceptMap.group[0].element[9].target[0].code[0] | 32413006 |
ConceptMap.group[0].element[9].target[0].display[0] | Transplantation of heart (procedure) |
ConceptMap.group[0].element[9].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[9].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[9].target[1].code[0] | 88039007 |
ConceptMap.group[0].element[9].target[1].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[9].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[9].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[9].target[2].code[0] | 70536003 |
ConceptMap.group[0].element[9].target[2].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[9].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[9].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[10].code[0] | heart-lung-and-liver |
ConceptMap.group[0].element[10].display[0] | HEART LUNG AND LIVER |
ConceptMap.group[0].element[10].target[0].code[0] | 32413006 |
ConceptMap.group[0].element[10].target[0].display[0] | Transplantation of heart (procedure) |
ConceptMap.group[0].element[10].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[10].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[10].target[1].code[0] | 88039007 |
ConceptMap.group[0].element[10].target[1].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[10].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[10].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[10].target[2].code[0] | 18027006 |
ConceptMap.group[0].element[10].target[2].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[10].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[10].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[11].code[0] | if-liver-bowel-pancreas |
ConceptMap.group[0].element[11].display[0] | IF LIVER BOWEL PANCREAS |
ConceptMap.group[0].element[11].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[11].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[11].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[11].target[0].comment[0] | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[11].target[1].code[0] | 56283009 |
ConceptMap.group[0].element[11].target[1].display[0] | Transplantation of small intestine (procedure) |
ConceptMap.group[0].element[11].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[11].target[1].comment[0] | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[11].target[2].code[0] | 62438007 |
ConceptMap.group[0].element[11].target[2].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[11].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[11].target[2].comment[0] | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[12].code[0] | if-liver-only |
ConceptMap.group[0].element[12].display[0] | IF LIVER ONLY |
ConceptMap.group[0].element[12].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[12].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[12].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[12].target[0].comment[0] | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[13].code[0] | if-multivisceral |
ConceptMap.group[0].element[13].display[0] | IF MULTIVISCERAL |
ConceptMap.group[0].element[13].target[0].code[0] | 118158008 |
ConceptMap.group[0].element[13].target[0].display[0] | Gastrointestinal tract transplantation (procedure) |
ConceptMap.group[0].element[13].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[13].target[0].comment[0] | A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[14].code[0] | kidney |
ConceptMap.group[0].element[14].display[0] | KIDNEY |
ConceptMap.group[0].element[14].target[0].code[0] | 70536003 |
ConceptMap.group[0].element[14].target[0].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[14].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[15].code[0] | kidney-and-pancreas |
ConceptMap.group[0].element[15].display[0] | KIDNEY AND PANCREAS |
ConceptMap.group[0].element[15].target[0].code[0] | 6471000179103 |
ConceptMap.group[0].element[15].target[0].display[0] | Transplantation of kidney and pancreas (procedure) |
ConceptMap.group[0].element[15].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[15].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[16].code[0] | kidney-and-pancreas-islets |
ConceptMap.group[0].element[16].display[0] | KIDNEY AND PANCREAS ISLETS |
ConceptMap.group[0].element[16].target[0].code[0] | 70536003 |
ConceptMap.group[0].element[16].target[0].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[16].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[16].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[16].target[1].code[0] | 128531006 |
ConceptMap.group[0].element[16].target[1].display[0] | Islet cell transplant (procedure) |
ConceptMap.group[0].element[16].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[16].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[16].target[2].code[0] | 62438007 |
ConceptMap.group[0].element[16].target[2].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[16].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[16].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[17].code[0] | liver |
ConceptMap.group[0].element[17].display[0] | LIVER |
ConceptMap.group[0].element[17].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[17].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[17].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[18].code[0] | liver-and-kidney |
ConceptMap.group[0].element[18].display[0] | LIVER AND KIDNEY |
ConceptMap.group[0].element[18].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[18].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[18].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[18].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[18].target[1].code[0] | 70536003 |
ConceptMap.group[0].element[18].target[1].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[18].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[18].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[19].code[0] | liver-and-pancreas |
ConceptMap.group[0].element[19].display[0] | LIVER AND PANCREAS |
ConceptMap.group[0].element[19].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[19].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[19].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[19].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[19].target[1].code[0] | 62438007 |
ConceptMap.group[0].element[19].target[1].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[19].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[19].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[20].code[0] | liver-kidney-and-pancreas |
ConceptMap.group[0].element[20].display[0] | LIVER KIDNEY AND PANCREAS |
ConceptMap.group[0].element[20].target[0].code[0] | 18027006 |
ConceptMap.group[0].element[20].target[0].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[20].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[20].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[20].target[1].code[0] | 70536003 |
ConceptMap.group[0].element[20].target[1].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[20].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[20].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[20].target[2].code[0] | 62438007 |
ConceptMap.group[0].element[20].target[2].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[20].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[20].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[21].code[0] | lung |
ConceptMap.group[0].element[21].display[0] | LUNG |
ConceptMap.group[0].element[21].target[0].code[0] | 88039007 |
ConceptMap.group[0].element[21].target[0].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[21].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[22].code[0] | lung-and-kidney |
ConceptMap.group[0].element[22].display[0] | LUNG AND KIDNEY |
ConceptMap.group[0].element[22].target[0].code[0] | 88039007 |
ConceptMap.group[0].element[22].target[0].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[22].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[22].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[22].target[1].code[0] | 70536003 |
ConceptMap.group[0].element[22].target[1].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[22].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[22].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[23].code[0] | lung-and-kidney-and-liver |
ConceptMap.group[0].element[23].display[0] | LUNG AND KIDNEY AND LIVER |
ConceptMap.group[0].element[23].target[0].code[0] | 88039007 |
ConceptMap.group[0].element[23].target[0].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[23].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[23].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[23].target[1].code[0] | 70536003 |
ConceptMap.group[0].element[23].target[1].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[23].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[23].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[23].target[2].code[0] | 18027006 |
ConceptMap.group[0].element[23].target[2].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[23].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[23].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[24].code[0] | lung-and-liver |
ConceptMap.group[0].element[24].display[0] | LUNG AND LIVER |
ConceptMap.group[0].element[24].target[0].code[0] | 88039007 |
ConceptMap.group[0].element[24].target[0].display[0] | Transplant of lung (procedure) |
ConceptMap.group[0].element[24].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[24].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[24].target[1].code[0] | 18027006 |
ConceptMap.group[0].element[24].target[1].display[0] | Transplantation of liver (procedure) |
ConceptMap.group[0].element[24].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[24].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[25].code[0] | ocular-tissue |
ConceptMap.group[0].element[25].display[0] | OCULAR TISSUE |
ConceptMap.group[0].element[25].target[0].code[0] | 120095006 |
ConceptMap.group[0].element[25].target[0].display[0] | Eye structure transplantation (procedure) |
ConceptMap.group[0].element[25].target[0].equivalence[0] | wider |
ConceptMap.group[0].element[26].code[0] | pancreas |
ConceptMap.group[0].element[26].display[0] | PANCREAS ONLY |
ConceptMap.group[0].element[26].target[0].code[0] | 62438007 |
ConceptMap.group[0].element[26].target[0].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[26].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[27].code[0] | pancreas-and-liver |
ConceptMap.group[0].element[27].display[0] | PANCREAS AND LIVER |
ConceptMap.group[0].element[27].target[0].code[0] | 62438007 |
ConceptMap.group[0].element[27].target[0].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[27].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[27].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[27].target[1].code[0] | 62438007 |
ConceptMap.group[0].element[27].target[1].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[27].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[27].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[28].code[0] | pancreas-islets |
ConceptMap.group[0].element[28].display[0] | PANCREAS ISLETS |
ConceptMap.group[0].element[28].target[0].code[0] | 62438007 |
ConceptMap.group[0].element[28].target[0].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[28].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[28].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[28].target[1].code[0] | 128531006 |
ConceptMap.group[0].element[28].target[1].display[0] | Islet cell transplant (procedure) |
ConceptMap.group[0].element[28].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[28].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[29].code[0] | pancreas-kidney |
ConceptMap.group[0].element[29].display[0] | PANCREAS KIDNEY |
ConceptMap.group[0].element[29].target[0].code[0] | 6471000179103 |
ConceptMap.group[0].element[29].target[0].display[0] | Transplantation of kidney and pancreas (procedure) |
ConceptMap.group[0].element[29].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[30].code[0] | pancreas-liver-and-kidney |
ConceptMap.group[0].element[30].display[0] | PANCREAS LIVER AND KIDNEY |
ConceptMap.group[0].element[30].target[0].code[0] | 62438007 |
ConceptMap.group[0].element[30].target[0].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[30].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[30].target[0].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[30].target[1].code[0] | 62438007 |
ConceptMap.group[0].element[30].target[1].display[0] | Transplantation of pancreas (procedure) |
ConceptMap.group[0].element[30].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[30].target[1].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[30].target[2].code[0] | 70536003 |
ConceptMap.group[0].element[30].target[2].display[0] | Transplant of kidney (procedure) |
ConceptMap.group[0].element[30].target[2].equivalence[0] | narrower |
ConceptMap.group[0].element[30].target[2].comment[0] | When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource. |
ConceptMap.group[0].element[31].code[0] | partial-lung |
ConceptMap.group[0].element[31].display[0] | PARTIAL LUNG |
ConceptMap.group[0].element[31].target[0].code[0] | 429332008 |
ConceptMap.group[0].element[31].target[0].display[0] | Transplantation of single lobe of lung (procedure) |
ConceptMap.group[0].element[31].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[32].code[0] | stem-cell |
ConceptMap.group[0].element[32].display[0] | STEM CELL |
ConceptMap.group[0].element[32].target[0].code[0] | 285581000000102 |
ConceptMap.group[0].element[32].target[0].display[0] | Transplantation of stem cells (procedure) |
ConceptMap.group[0].element[32].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-typeof-transplantprocedure" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-typeof-transplantprocedure" /> <version value="0.0.1" /> <name value="GenomicsTypeofTransplantProcedure" /> <title value="Genomics Type of Transplant Procedure" /> <status value="draft" /> <date value="2024-08-12T17:40:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording concepts for transplantation procedure. This is intended for the element Procedure.code" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="bilateral-single-lung" /> <display value="BILATERAL SINGLE LUNG" /> <target> <code value="232660006" /> <display value="Bilateral sequential single lung transplant (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="bone-marrow" /> <display value="BONE MARROW" /> <target> <code value="23719005" /> <display value="Transplantation of bone marrow (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="double-kidney" /> <display value="DOUBLE KIDNEY" /> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided that this transplation procedure is for double kidney. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="double-lung" /> <display value="DOUBLE LUNG" /> <target> <code value="232658009" /> <display value="Double lung transplant (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="enbloc-kidney" /> <display value="EN-BLOCKIDNEY" /> <target> <equivalence value="unmatched" /> <comment value="This concept should be recored by free text under Procedure.code. No suitable SNOMED CT code existed for it at this time but process are being iniated to ensure the SNOMED Team added it to the SNOMED Vocab." /> </target> </element> <element> <code value="heart" /> <display value="HEART" /> <target> <code value="32413006" /> <display value="Transplantation of heart (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="heart-and-kidney" /> <display value="HEART AND KIDNEY" /> <target> <code value="32413006" /> <display value="Transplantation of heart (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that this transplantation procedure is for a combined heart and kidney transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that this transplantation procedure is for combined heart and kidney procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="heart-and-liver" /> <display value="HEART AND LIVER" /> <target> <code value="32413006" /> <display value="Transplantation of heart (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="heart-lung" /> <display value="HEART LUNG" /> <target> <code value="32477003" /> <display value="Heart and lung transplant" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="heart-lung-and-kidney" /> <display value="HEART LUNG AND KIDNEY" /> <target> <code value="32413006" /> <display value="Transplantation of heart (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="heart-lung-and-liver" /> <display value="HEART LUNG AND LIVER" /> <target> <code value="32413006" /> <display value="Transplantation of heart (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="if-liver-bowel-pancreas" /> <display value="IF LIVER BOWEL PANCREAS" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="56283009" /> <display value="Transplantation of small intestine (procedure)" /> <equivalence value="narrower" /> <comment value="A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="if-liver-only" /> <display value="IF LIVER ONLY" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="equivalent" /> <comment value="A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="if-multivisceral" /> <display value="IF MULTIVISCERAL" /> <target> <code value="118158008" /> <display value="Gastrointestinal tract transplantation (procedure)" /> <equivalence value="equivalent" /> <comment value="A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="kidney" /> <display value="KIDNEY" /> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="kidney-and-pancreas" /> <display value="KIDNEY AND PANCREAS" /> <target> <code value="6471000179103" /> <display value="Transplantation of kidney and pancreas (procedure)" /> <equivalence value="equivalent" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="kidney-and-pancreas-islets" /> <display value="KIDNEY AND PANCREAS ISLETS" /> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="128531006" /> <display value="Islet cell transplant (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="liver" /> <display value="LIVER" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="liver-and-kidney" /> <display value="LIVER AND KIDNEY" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="liver-and-pancreas" /> <display value="LIVER AND PANCREAS" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="liver-kidney-and-pancreas" /> <display value="LIVER KIDNEY AND PANCREAS" /> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="lung" /> <display value="LUNG" /> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="lung-and-kidney" /> <display value="LUNG AND KIDNEY" /> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="lung-and-kidney-and-liver" /> <display value="LUNG AND KIDNEY AND LIVER" /> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="lung-and-liver" /> <display value="LUNG AND LIVER" /> <target> <code value="88039007" /> <display value="Transplant of lung (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="18027006" /> <display value="Transplantation of liver (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="ocular-tissue" /> <display value="OCULAR TISSUE" /> <target> <code value="120095006" /> <display value="Eye structure transplantation (procedure)" /> <equivalence value="wider" /> </target> </element> <element> <code value="pancreas" /> <display value="PANCREAS ONLY" /> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="pancreas-and-liver" /> <display value="PANCREAS AND LIVER" /> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="pancreas-islets" /> <display value="PANCREAS ISLETS" /> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="128531006" /> <display value="Islet cell transplant (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="pancreas-kidney" /> <display value="PANCREAS KIDNEY" /> <target> <code value="6471000179103" /> <display value="Transplantation of kidney and pancreas (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="pancreas-liver-and-kidney" /> <display value="PANCREAS LIVER AND KIDNEY" /> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="62438007" /> <display value="Transplantation of pancreas (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> <target> <code value="70536003" /> <display value="Transplant of kidney (procedure)" /> <equivalence value="narrower" /> <comment value="When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." /> </target> </element> <element> <code value="partial-lung" /> <display value="PARTIAL LUNG" /> <target> <code value="429332008" /> <display value="Transplantation of single lobe of lung (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="stem-cell" /> <display value="STEM CELL" /> <target> <code value="285581000000102" /> <display value="Transplantation of stem cells (procedure)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-typeof-transplantprocedure", "url": "https://fhir.nhs.uk/ConceptMap/genomics-typeof-transplantprocedure", "name": "GenomicsTypeofTransplantProcedure", "title": "Genomics Type of Transplant Procedure", "version": "0.0.1", "status": "draft", "date": "2024-08-12T17:40:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording concepts for transplantation procedure. This is intended for the element Procedure.code", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "bilateral-single-lung", "display": "BILATERAL SINGLE LUNG", "target": [ { "code": "232660006", "display": "Bilateral sequential single lung transplant (procedure)", "equivalence": "equivalent" } ] }, { "code": "bone-marrow", "display": "BONE MARROW", "target": [ { "code": "23719005", "display": "Transplantation of bone marrow (procedure)", "equivalence": "equivalent" } ] }, { "code": "double-kidney", "display": "DOUBLE KIDNEY", "target": [ { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided that this transplation procedure is for double kidney. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "double-lung", "display": "DOUBLE LUNG", "target": [ { "code": "232658009", "display": "Double lung transplant (procedure)", "equivalence": "equivalent" } ] }, { "code": "enbloc-kidney", "display": "EN-BLOCKIDNEY", "target": [ { "equivalence": "unmatched", "comment": "This concept should be recored by free text under Procedure.code. No suitable SNOMED CT code existed for it at this time but process are being iniated to ensure the SNOMED Team added it to the SNOMED Vocab." } ] }, { "code": "heart", "display": "HEART", "target": [ { "code": "32413006", "display": "Transplantation of heart (procedure)", "equivalence": "equivalent" } ] }, { "code": "heart-and-kidney", "display": "HEART AND KIDNEY", "target": [ { "code": "32413006", "display": "Transplantation of heart (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that this transplantation procedure is for a combined heart and kidney transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that this transplantation procedure is for combined heart and kidney procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "heart-and-liver", "display": "HEART AND LIVER", "target": [ { "code": "32413006", "display": "Transplantation of heart (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "heart-lung", "display": "HEART LUNG", "target": [ { "code": "32477003", "display": "Heart and lung transplant", "equivalence": "equivalent" } ] }, { "code": "heart-lung-and-kidney", "display": "HEART LUNG AND KIDNEY", "target": [ { "code": "32413006", "display": "Transplantation of heart (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "heart-lung-and-liver", "display": "HEART LUNG AND LIVER", "target": [ { "code": "32413006", "display": "Transplantation of heart (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "if-liver-bowel-pancreas", "display": "IF LIVER BOWEL PANCREAS", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "56283009", "display": "Transplantation of small intestine (procedure)", "equivalence": "narrower", "comment": "A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this combined procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource. When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "if-liver-only", "display": "IF LIVER ONLY", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "equivalent", "comment": "A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource." } ] }, { "code": "if-multivisceral", "display": "IF MULTIVISCERAL", "target": [ { "code": "118158008", "display": "Gastrointestinal tract transplantation (procedure)", "equivalence": "equivalent", "comment": "A negative IF (Incompatible Factor) Blood test is a precondition to carrying out this procedure. The IF Blood test (250406009|Blood Incompatible(finding)) should be recorded in an observation resource.The procedures should be recorded in a separate Procedure resource." } ] }, { "code": "kidney", "display": "KIDNEY", "target": [ { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "equivalent" } ] }, { "code": "kidney-and-pancreas", "display": "KIDNEY AND PANCREAS", "target": [ { "code": "6471000179103", "display": "Transplantation of kidney and pancreas (procedure)", "equivalence": "equivalent", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "kidney-and-pancreas-islets", "display": "KIDNEY AND PANCREAS ISLETS", "target": [ { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "128531006", "display": "Islet cell transplant (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "liver", "display": "LIVER", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "equivalent" } ] }, { "code": "liver-and-kidney", "display": "LIVER AND KIDNEY", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "liver-and-pancreas", "display": "LIVER AND PANCREAS", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "liver-kidney-and-pancreas", "display": "LIVER KIDNEY AND PANCREAS", "target": [ { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "lung", "display": "LUNG", "target": [ { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "equivalent" } ] }, { "code": "lung-and-kidney", "display": "LUNG AND KIDNEY", "target": [ { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "lung-and-kidney-and-liver", "display": "LUNG AND KIDNEY AND LIVER", "target": [ { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "lung-and-liver", "display": "LUNG AND LIVER", "target": [ { "code": "88039007", "display": "Transplant of lung (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "18027006", "display": "Transplantation of liver (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "ocular-tissue", "display": "OCULAR TISSUE", "target": [ { "code": "120095006", "display": "Eye structure transplantation (procedure)", "equivalence": "wider" } ] }, { "code": "pancreas", "display": "PANCREAS ONLY", "target": [ { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "equivalent" } ] }, { "code": "pancreas-and-liver", "display": "PANCREAS AND LIVER", "target": [ { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "pancreas-islets", "display": "PANCREAS ISLETS", "target": [ { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "128531006", "display": "Islet cell transplant (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "pancreas-kidney", "display": "PANCREAS KIDNEY", "target": [ { "code": "6471000179103", "display": "Transplantation of kidney and pancreas (procedure)", "equivalence": "equivalent" } ] }, { "code": "pancreas-liver-and-kidney", "display": "PANCREAS LIVER AND KIDNEY", "target": [ { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "62438007", "display": "Transplantation of pancreas (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." }, { "code": "70536003", "display": "Transplant of kidney (procedure)", "equivalence": "narrower", "comment": "When this concept is used, further notes should be provided to state that it is a combined transplant procedure. Respective procedures should be recorded in a separate Procedure resource." } ] }, { "code": "partial-lung", "display": "PARTIAL LUNG", "target": [ { "code": "429332008", "display": "Transplantation of single lobe of lung (procedure)", "equivalence": "equivalent" } ] }, { "code": "stem-cell", "display": "STEM CELL", "target": [ { "code": "285581000000102", "display": "Transplantation of stem cells (procedure)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Proband Relationship Type
Usage |
---|
ConceptMap used for the translation and recording of concept for RelatedPerson.relationship field,i.e, proband related person relationship types |
HTML View
Source | Equivalence | Destination |
biological-aunt (BIOLOGICAL AUNT) | subsumes | AUNT (aunt) |
biological-brother (BIOLOGICAL BROTHER) | equivalent | NBRO (natural brother) |
biological-child (BIOLOGICAL CHILD) | equivalent | NCHILD (natural child) |
biological-cousin (BIOLOGICAL COUSIN) | subsumes | COUSN (cousin) |
biological-daughter (BIOLOGICAL DAUGHTER) | equivalent | DAU (natural daughter) |
biological-father (BIOLOGICAL FATHER) | equivalent | NFTH (natural father) |
biological-grandfather (BIOLOGICAL GRANDFATHER) | subsumes | GRFTH (grandfather) |
biological-grandmother (BIOLOGICAL GRANDMOTHER) | subsumes | GRMTH (grandmother) |
biological-mother (BIOLOGICAL MOTHER) | equivalent | NMTH (natural mother) |
biological-sister (BIOLOGICAL SISTER) | equivalent | NSIS (natural sister) |
biological-son (BIOLOGICAL SON) | equivalent | SON (natural son) |
biological-uncle (BIOLOGICAL UNCLE) | subsumes | UNCLE (uncle) |
Table View
ConceptMap.id[0] | genomics-probandrelationshiptype |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-probandrelationshiptype |
ConceptMap.version[0] | 0.1.0 |
ConceptMap.name[0] | GenomicsProbandRelationshipType |
ConceptMap.title[0] | Genomics Proband Relationship Type |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-06-28T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concept for RelatedPerson.relationship field,i.e, proband related person relationship types |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://hl7.org/fhir/ValueSet/relatedperson-relationshiptype |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://terminology.hl7.org/CodeSystem/v3-RoleCode |
ConceptMap.group[0].element[0].code[0] | biological-aunt |
ConceptMap.group[0].element[0].display[0] | BIOLOGICAL AUNT |
ConceptMap.group[0].element[0].target[0].code[0] | AUNT |
ConceptMap.group[0].element[0].target[0].display[0] | aunt |
ConceptMap.group[0].element[0].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[1].code[0] | biological-brother |
ConceptMap.group[0].element[1].display[0] | BIOLOGICAL BROTHER |
ConceptMap.group[0].element[1].target[0].code[0] | NBRO |
ConceptMap.group[0].element[1].target[0].display[0] | natural brother |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | biological-child |
ConceptMap.group[0].element[2].display[0] | BIOLOGICAL CHILD |
ConceptMap.group[0].element[2].target[0].code[0] | NCHILD |
ConceptMap.group[0].element[2].target[0].display[0] | natural child |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | biological-cousin |
ConceptMap.group[0].element[3].display[0] | BIOLOGICAL COUSIN |
ConceptMap.group[0].element[3].target[0].code[0] | COUSN |
ConceptMap.group[0].element[3].target[0].display[0] | cousin |
ConceptMap.group[0].element[3].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[4].code[0] | biological-daughter |
ConceptMap.group[0].element[4].display[0] | BIOLOGICAL DAUGHTER |
ConceptMap.group[0].element[4].target[0].code[0] | DAU |
ConceptMap.group[0].element[4].target[0].display[0] | natural daughter |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | biological-father |
ConceptMap.group[0].element[5].display[0] | BIOLOGICAL FATHER |
ConceptMap.group[0].element[5].target[0].code[0] | NFTH |
ConceptMap.group[0].element[5].target[0].display[0] | natural father |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | biological-grandfather |
ConceptMap.group[0].element[6].display[0] | BIOLOGICAL GRANDFATHER |
ConceptMap.group[0].element[6].target[0].code[0] | GRFTH |
ConceptMap.group[0].element[6].target[0].display[0] | grandfather |
ConceptMap.group[0].element[6].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[7].code[0] | biological-grandmother |
ConceptMap.group[0].element[7].display[0] | BIOLOGICAL GRANDMOTHER |
ConceptMap.group[0].element[7].target[0].code[0] | GRMTH |
ConceptMap.group[0].element[7].target[0].display[0] | grandmother |
ConceptMap.group[0].element[7].target[0].equivalence[0] | subsumes |
ConceptMap.group[0].element[8].code[0] | biological-mother |
ConceptMap.group[0].element[8].display[0] | BIOLOGICAL MOTHER |
ConceptMap.group[0].element[8].target[0].code[0] | NMTH |
ConceptMap.group[0].element[8].target[0].display[0] | natural mother |
ConceptMap.group[0].element[8].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[9].code[0] | biological-sister |
ConceptMap.group[0].element[9].display[0] | BIOLOGICAL SISTER |
ConceptMap.group[0].element[9].target[0].code[0] | NSIS |
ConceptMap.group[0].element[9].target[0].display[0] | natural sister |
ConceptMap.group[0].element[9].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[10].code[0] | biological-son |
ConceptMap.group[0].element[10].display[0] | BIOLOGICAL SON |
ConceptMap.group[0].element[10].target[0].code[0] | SON |
ConceptMap.group[0].element[10].target[0].display[0] | natural son |
ConceptMap.group[0].element[10].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[11].code[0] | biological-uncle |
ConceptMap.group[0].element[11].display[0] | BIOLOGICAL UNCLE |
ConceptMap.group[0].element[11].target[0].code[0] | UNCLE |
ConceptMap.group[0].element[11].target[0].display[0] | uncle |
ConceptMap.group[0].element[11].target[0].equivalence[0] | subsumes |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-probandrelationshiptype" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-probandrelationshiptype" /> <version value="0.1.0" /> <name value="GenomicsProbandRelationshipType" /> <title value="Genomics Proband Relationship Type" /> <status value="draft" /> <date value="2024-06-28T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concept for RelatedPerson.relationship field,i.e, proband related person relationship types" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://hl7.org/fhir/ValueSet/relatedperson-relationshiptype" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://terminology.hl7.org/CodeSystem/v3-RoleCode" /> <element> <code value="biological-aunt" /> <display value="BIOLOGICAL AUNT" /> <target> <code value="AUNT" /> <display value="aunt" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="biological-brother" /> <display value="BIOLOGICAL BROTHER" /> <target> <code value="NBRO" /> <display value="natural brother" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-child" /> <display value="BIOLOGICAL CHILD" /> <target> <code value="NCHILD" /> <display value="natural child" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-cousin" /> <display value="BIOLOGICAL COUSIN" /> <target> <code value="COUSN" /> <display value="cousin" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="biological-daughter" /> <display value="BIOLOGICAL DAUGHTER" /> <target> <code value="DAU" /> <display value="natural daughter" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-father" /> <display value="BIOLOGICAL FATHER" /> <target> <code value="NFTH" /> <display value="natural father" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-grandfather" /> <display value="BIOLOGICAL GRANDFATHER" /> <target> <code value="GRFTH" /> <display value="grandfather" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="biological-grandmother" /> <display value="BIOLOGICAL GRANDMOTHER" /> <target> <code value="GRMTH" /> <display value="grandmother" /> <equivalence value="subsumes" /> </target> </element> <element> <code value="biological-mother" /> <display value="BIOLOGICAL MOTHER" /> <target> <code value="NMTH" /> <display value="natural mother" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-sister" /> <display value="BIOLOGICAL SISTER" /> <target> <code value="NSIS" /> <display value="natural sister" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-son" /> <display value="BIOLOGICAL SON" /> <target> <code value="SON" /> <display value="natural son" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="biological-uncle" /> <display value="BIOLOGICAL UNCLE" /> <target> <code value="UNCLE" /> <display value="uncle" /> <equivalence value="subsumes" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-probandrelationshiptype", "url": "https://fhir.nhs.uk/ConceptMap/genomics-probandrelationshiptype", "version": "0.1.0", "name": "GenomicsProbandRelationshipType", "title": "Genomics Proband Relationship Type", "status": "draft", "date": "2024-06-28T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concept for RelatedPerson.relationship field,i.e, proband related person relationship types", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://hl7.org/fhir/ValueSet/relatedperson-relationshiptype", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://terminology.hl7.org/CodeSystem/v3-RoleCode", "element": [ { "code": "biological-aunt", "display": "BIOLOGICAL AUNT", "target": [ { "code": "AUNT", "display": "aunt", "equivalence": "subsumes" } ] }, { "code": "biological-brother", "display": "BIOLOGICAL BROTHER", "target": [ { "code": "NBRO", "display": "natural brother", "equivalence": "equivalent" } ] }, { "code": "biological-child", "display": "BIOLOGICAL CHILD", "target": [ { "code": "NCHILD", "display": "natural child", "equivalence": "equivalent" } ] }, { "code": "biological-cousin", "display": "BIOLOGICAL COUSIN", "target": [ { "code": "COUSN", "display": "cousin", "equivalence": "subsumes" } ] }, { "code": "biological-daughter", "display": "BIOLOGICAL DAUGHTER", "target": [ { "code": "DAU", "display": "natural daughter", "equivalence": "equivalent" } ] }, { "code": "biological-father", "display": "BIOLOGICAL FATHER", "target": [ { "code": "NFTH", "display": "natural father", "equivalence": "equivalent" } ] }, { "code": "biological-grandfather", "display": "BIOLOGICAL GRANDFATHER", "target": [ { "code": "GRFTH", "display": "grandfather", "equivalence": "subsumes" } ] }, { "code": "biological-grandmother", "display": "BIOLOGICAL GRANDMOTHER", "target": [ { "code": "GRMTH", "display": "grandmother", "equivalence": "subsumes" } ] }, { "code": "biological-mother", "display": "BIOLOGICAL MOTHER", "target": [ { "code": "NMTH", "display": "natural mother", "equivalence": "equivalent" } ] }, { "code": "biological-sister", "display": "BIOLOGICAL SISTER", "target": [ { "code": "NSIS", "display": "natural sister", "equivalence": "equivalent" } ] }, { "code": "biological-son", "display": "BIOLOGICAL SON", "target": [ { "code": "SON", "display": "natural son", "equivalence": "equivalent" } ] }, { "code": "biological-uncle", "display": "BIOLOGICAL UNCLE", "target": [ { "code": "UNCLE", "display": "uncle", "equivalence": "subsumes" } ] } ] } ] }
ConceptMap Genomic Test Request Priority
Usage |
---|
ConceptMap used for the translation and recording of Genomics test request Priority options, i.e., ServiceRequest.priority |
HTML View
Table View
ConceptMap.id[0] | genomics-testrequestpriority |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-testrequestpriority |
ConceptMap.version[0] | 0.0.1 |
ConceptMap.name[0] | GenomicsTestRequestPriority |
ConceptMap.title[0] | Genomics Test Request Priority |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-01T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of Genomics test request Priority options, i.e., ServiceRequest.priority |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://hl7.org/fhir/ValueSet/request-priority |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://hl7.org/fhir/request-priority |
ConceptMap.group[0].element[0].code[0] | routine |
ConceptMap.group[0].element[0].display[0] | Routine |
ConceptMap.group[0].element[0].target[0].code[0] | routine |
ConceptMap.group[0].element[0].target[0].display[0] | Routine |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | urgent |
ConceptMap.group[0].element[1].display[0] | Urgent |
ConceptMap.group[0].element[1].target[0].code[0] | urgent |
ConceptMap.group[0].element[1].target[0].display[0] | Urgent |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-testrequestpriority" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-testrequestpriority" /> <version value="0.0.1" /> <name value="GenomicsTestRequestPriority" /> <title value="Genomics Test Request Priority" /> <status value="draft" /> <date value="2024-08-01T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of Genomics test request Priority options, i.e., ServiceRequest.priority" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://hl7.org/fhir/ValueSet/request-priority" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://hl7.org/fhir/request-priority" /> <element> <code value="routine" /> <display value="Routine" /> <target> <code value="routine" /> <display value="Routine" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="urgent" /> <display value="Urgent" /> <target> <code value="urgent" /> <display value="Urgent" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-testrequestpriority", "url": "https://fhir.nhs.uk/ConceptMap/genomics-testrequestpriority", "version": "0.0.1", "name": "GenomicsTestRequestPriority", "title": "Genomics Test Request Priority", "status": "draft", "date": "2024-08-01T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of Genomics test request Priority options, i.e., ServiceRequest.priority", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://hl7.org/fhir/ValueSet/request-priority", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://hl7.org/fhir/request-priority", "element": [ { "code": "routine", "display": "Routine", "target": [ { "code": "routine", "display": "Routine", "equivalence": "equivalent" } ] }, { "code": "urgent", "display": "Urgent", "target": [ { "code": "urgent", "display": "Urgent", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Specimen Final Sample
Usage |
---|
ConceptMap used for the translation and recording of concepts for the categories of final sample types.This is intended for the element Specimen.type |
HTML View
Source Concept | Equivalence | Destination Concept | Comment |
Code [https://future.nhs.uk/NHSgenomics/view?objectId=222250117] | Code [http://snomed.info/sct] | ||
DNA (DNA) | :Equivalent | 258566005 (Deoxyribonucleic acid specimen (specimen)) | |
RNA (RNA) | :Equivalent | 441673008 (Ribonucleic acid specimen (specimen)) | |
cDNA (cDNA) | :Equivalent | 70016006 (Complementary deoxyribonucleic acid (substance)) | |
ctDNA (ctDNA) | :Unmatched | No suitable SNOMED CT code is found for this concept at this time. Thus, this concept should be recored under Specimen.type as free text as Circulating Tumour DNA | |
cfDNA (cfDNA) | :Equivalent | 70016006 (Cell free deoxyribonucleic acid (substance)) | |
cell-suspension (Cell Suspension) | :Equivalent | 702451000 (Cultured cells (substance)) | |
fixed-tissue-on-slide (Fixed Tissue on Slide) | :Narrower | 787150001 (Stained slide of tissue section (specimen)) | An appropriate concept should be selected to indicate either stained or unstained. |
other (Other) | :Wider | 123038009 (Specimen (specimen)) | Any other suitable Specimen types not listed on this code. This should be provided by free text if no suitable SNOMED CT is found. |
Table View
ConceptMap.id[0] | genomics-finalsample |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-finalsample |
ConceptMap.version[0] | 0.0.1 |
ConceptMap.name[0] | GenomicsFinalSample |
ConceptMap.title[0] | Genomics Final Sample |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-10-01T18:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for the categories of final sample types.This is intended for the element Specimen.type |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | DNA |
ConceptMap.group[0].element[0].display[0] | DNA |
ConceptMap.group[0].element[0].target[0].code[0] | 258566005 |
ConceptMap.group[0].element[0].target[0].display[0] | Deoxyribonucleic acid specimen (specimen) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | RNA |
ConceptMap.group[0].element[1].display[0] | RNA |
ConceptMap.group[0].element[1].target[0].code[0] | 441673008 |
ConceptMap.group[0].element[1].target[0].display[0] | Ribonucleic acid specimen (specimen) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | cDNA |
ConceptMap.group[0].element[2].display[0] | cDNA |
ConceptMap.group[0].element[2].target[0].code[0] | 70016006 |
ConceptMap.group[0].element[2].target[0].display[0] | Complementary deoxyribonucleic acid (substance) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | ctDNA |
ConceptMap.group[0].element[3].display[0] | ctDNA |
ConceptMap.group[0].element[3].target[0].equivalence[0] | unmatched |
ConceptMap.group[0].element[3].target[0].comment[0] | No suitable SNOMED CT code is found for this concept at this time. Thus, this concept should be recored under Specimen.type as free text as Circulating Tumour DNA |
ConceptMap.group[0].element[4].code[0] | cfDNA |
ConceptMap.group[0].element[4].display[0] | cfDNA |
ConceptMap.group[0].element[4].target[0].code[0] | 70016006 |
ConceptMap.group[0].element[4].target[0].display[0] | Cell free deoxyribonucleic acid (substance) |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | cell-suspension |
ConceptMap.group[0].element[5].display[0] | Cell Suspension |
ConceptMap.group[0].element[5].target[0].code[0] | 702451000 |
ConceptMap.group[0].element[5].target[0].display[0] | Cultured cells (substance) |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | fixed-tissue-on-slide |
ConceptMap.group[0].element[6].display[0] | Fixed Tissue on Slide |
ConceptMap.group[0].element[6].target[0].code[0] | 787150001 |
ConceptMap.group[0].element[6].target[0].display[0] | Stained slide of tissue section (specimen) |
ConceptMap.group[0].element[6].target[0].equivalence[0] | narrower |
ConceptMap.group[0].element[6].target[0].comment[0] | An appropriate concept should be selected to indicate either stained or unstained. |
ConceptMap.group[0].element[6].target[1].code[0] | 787149001 |
ConceptMap.group[0].element[6].target[1].display[0] | Unstained slide of tissue section (specimen) |
ConceptMap.group[0].element[6].target[1].equivalence[0] | narrower |
ConceptMap.group[0].element[6].target[1].comment[0] | An appropriate concept should be selected to indicate either stained or unstained. |
ConceptMap.group[0].element[7].code[0] | other |
ConceptMap.group[0].element[7].display[0] | Other |
ConceptMap.group[0].element[7].target[0].code[0] | 123038009 |
ConceptMap.group[0].element[7].target[0].display[0] | Specimen (specimen) |
ConceptMap.group[0].element[7].target[0].equivalence[0] | wider |
ConceptMap.group[0].element[7].target[0].comment[0] | Any other suitable Specimen types not listed on this code. This should be provided by free text if no suitable SNOMED CT is found. |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-finalsample" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-finalsample" /> <version value="0.0.1" /> <name value="GenomicsFinalSample" /> <title value="Genomics Final Sample" /> <status value="draft" /> <date value="2024-10-01T18:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for the categories of final sample types.This is intended for the element Specimen.type" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="DNA" /> <display value="DNA" /> <target> <code value="258566005" /> <display value="Deoxyribonucleic acid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="RNA" /> <display value="RNA" /> <target> <code value="441673008" /> <display value="Ribonucleic acid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="cDNA" /> <display value="cDNA" /> <target> <code value="70016006" /> <display value="Complementary deoxyribonucleic acid (substance)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="ctDNA" /> <display value="ctDNA" /> <target> <equivalence value="unmatched" /> <comment value="No suitable SNOMED CT code is found for this concept at this time. Thus, this concept should be recored under Specimen.type as free text as Circulating Tumour DNA" /> </target> </element> <element> <code value="cfDNA" /> <display value="cfDNA" /> <target> <code value="70016006" /> <display value="Cell free deoxyribonucleic acid (substance)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="cell-suspension" /> <display value="Cell Suspension" /> <target> <code value="702451000" /> <display value="Cultured cells (substance)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="fixed-tissue-on-slide" /> <display value="Fixed Tissue on Slide" /> <target> <code value="787150001" /> <display value="Stained slide of tissue section (specimen)" /> <equivalence value="narrower" /> <comment value="An appropriate concept should be selected to indicate either stained or unstained." /> </target> <target> <code value="787149001" /> <display value="Unstained slide of tissue section (specimen)" /> <equivalence value="narrower" /> <comment value="An appropriate concept should be selected to indicate either stained or unstained." /> </target> </element> <element> <code value="other" /> <display value="Other" /> <target> <code value="123038009" /> <display value="Specimen (specimen)" /> <equivalence value="wider" /> <comment value="Any other suitable Specimen types not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-finalsample", "url": "https://fhir.nhs.uk/ConceptMap/genomics-finalsample", "version": "0.0.1", "name": "GenomicsFinalSample", "title": "Genomics Final Sample", "status": "draft", "date": "2024-10-01T18:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for the categories of final sample types.This is intended for the element Specimen.type", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "DNA", "display": "DNA", "target": [ { "code": "258566005", "display": "Deoxyribonucleic acid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "RNA", "display": "RNA", "target": [ { "code": "441673008", "display": "Ribonucleic acid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "cDNA", "display": "cDNA", "target": [ { "code": "70016006", "display": "Complementary deoxyribonucleic acid (substance)", "equivalence": "equivalent" } ] }, { "code": "ctDNA", "display": "ctDNA", "target": [ { "equivalence": "unmatched", "comment": "No suitable SNOMED CT code is found for this concept at this time. Thus, this concept should be recored under Specimen.type as free text as Circulating Tumour DNA" } ] }, { "code": "cfDNA", "display": "cfDNA", "target": [ { "code": "70016006", "display": "Cell free deoxyribonucleic acid (substance)", "equivalence": "equivalent" } ] }, { "code": "cell-suspension", "display": "Cell Suspension", "target": [ { "code": "702451000", "display": "Cultured cells (substance)", "equivalence": "equivalent" } ] }, { "code": "fixed-tissue-on-slide", "display": "Fixed Tissue on Slide", "target": [ { "code": "787150001", "display": "Stained slide of tissue section (specimen)", "equivalence": "narrower", "comment": "An appropriate concept should be selected to indicate either stained or unstained." }, { "code": "787149001", "display": "Unstained slide of tissue section (specimen)", "equivalence": "narrower", "comment": "An appropriate concept should be selected to indicate either stained or unstained." } ] }, { "code": "other", "display": "Other", "target": [ { "code": "123038009", "display": "Specimen (specimen)", "equivalence": "wider", "comment": "Any other suitable Specimen types not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." } ] } ] } ] }
ConceptMap Genomic Specimen Primary Sample
Usage |
---|
ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type |
HTML View
to http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20
Source | Equivalence | Destination | Comment |
amniotic-fluid (Amniotic Fluid) | equivalent | 119373006 (Amniotic fluid specimen (specimen)) | |
blood (Blood) | equivalent | 119297000 (Blood specimen) | |
bone-marrow-trephine (Bone Marrow Trephine) | equivalent | 258585008 (Bone marrow trephine specimen) | |
bone-marrrow-aspirate (Bone Marrrow Aspirate) | equivalent | 396997002 (Specimen from bone marrow obtained by aspiration) | |
buccals-smear (Buccals Smear) | equivalent | 258564008 (Buccal smear specimen) | |
cerebrospinal-fluid (Cerebrospinal Fluid) | equivalent | 258450006 (Cerebrospinal fluid specimen (specimen)) | |
cord-blood (Cord Blood) | equivalent | 122556008 (Cord blood specimen (specimen)) | |
chorionic-villus-sampling (Chorionic Villus Sampling) | equivalent | 258565009 (Chorionic villi specimen) | |
fetal-blood (Fetal Blood) | equivalent | 737357006 (Fetal blood specimen) | |
fibroblasts (Fibroblasts) | equivalent | 119333000 (Fibroblast specimen) | |
heart (Heart) | equivalent | 127462005 (Specimen from heart (specimen)) | |
kidney (Kidney) | equivalent | 127473003 (Specimen from kidney (specimen)) | |
liver (Liver) | equivalent | 119383005 (Specimen from liver (specimen)) | |
lymph-node (Lymph Node) | equivalent | 258589002 (Lymph node specimen) | |
other (Other) | wider | 123038009 (Specimen (specimen)) | Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found. |
pericardial (Pericardial) | equivalent | 122571007 (Pericardial fluid specimen (specimen)) | |
peritoneal (Peritoneal) | equivalent | 430250001 (Specimen from peritoneum (specimen)) | |
pleural-fluid (Pleural Fluid) | equivalent | 418564007 (Pleural fluid specimen (specimen)) | |
products of conception (Products Of Conception) | equivalent | 258428005 (Products of conception tissue specimen) | |
saliva (Saliva) | equivalent | 119342007 (Saliva specimen (specimen)) | |
skeletal muscle (Skeletal Muscle) | equivalent | 119331003 (Skeletal muscle specimen (specimen)) | |
skin (Skin) | equivalent | 608969007 (Specimen from skin (specimen)) | |
spleen (Spleen) | equivalent | 433308004 (Specimen from spleen (specimen)) | |
tumour (Tumour) | equivalent | 258435002 (Tumor tissue specimen (specimen)) | |
urine (Urine) | equivalent | 122575003 (Urine specimen (specimen)) |
Table View
ConceptMap.id[0] | genomics-primarysample |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-primarysample |
ConceptMap.version[0] | 0.0.1 |
ConceptMap.name[0] | GenomicsPrimarySample |
ConceptMap.title[0] | Genomics Primary Sample |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-15T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | amniotic-fluid |
ConceptMap.group[0].element[0].display[0] | Amniotic Fluid |
ConceptMap.group[0].element[0].target[0].code[0] | 119373006 |
ConceptMap.group[0].element[0].target[0].display[0] | Amniotic fluid specimen (specimen) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | blood |
ConceptMap.group[0].element[1].display[0] | Blood |
ConceptMap.group[0].element[1].target[0].code[0] | 119297000 |
ConceptMap.group[0].element[1].target[0].display[0] | Blood specimen |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | bone-marrow-trephine |
ConceptMap.group[0].element[2].display[0] | Bone Marrow Trephine |
ConceptMap.group[0].element[2].target[0].code[0] | 258585008 |
ConceptMap.group[0].element[2].target[0].display[0] | Bone marrow trephine specimen |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | bone-marrrow-aspirate |
ConceptMap.group[0].element[3].display[0] | Bone Marrrow Aspirate |
ConceptMap.group[0].element[3].target[0].code[0] | 396997002 |
ConceptMap.group[0].element[3].target[0].display[0] | Specimen from bone marrow obtained by aspiration |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | buccals-smear |
ConceptMap.group[0].element[4].display[0] | Buccals Smear |
ConceptMap.group[0].element[4].target[0].code[0] | 258564008 |
ConceptMap.group[0].element[4].target[0].display[0] | Buccal smear specimen |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | cerebrospinal-fluid |
ConceptMap.group[0].element[5].display[0] | Cerebrospinal Fluid |
ConceptMap.group[0].element[5].target[0].code[0] | 258450006 |
ConceptMap.group[0].element[5].target[0].display[0] | Cerebrospinal fluid specimen (specimen) |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | cord-blood |
ConceptMap.group[0].element[6].display[0] | Cord Blood |
ConceptMap.group[0].element[6].target[0].code[0] | 122556008 |
ConceptMap.group[0].element[6].target[0].display[0] | Cord blood specimen (specimen) |
ConceptMap.group[0].element[6].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[7].code[0] | chorionic-villus-sampling |
ConceptMap.group[0].element[7].display[0] | Chorionic Villus Sampling |
ConceptMap.group[0].element[7].target[0].code[0] | 258565009 |
ConceptMap.group[0].element[7].target[0].display[0] | Chorionic villi specimen |
ConceptMap.group[0].element[7].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[8].code[0] | fetal-blood |
ConceptMap.group[0].element[8].display[0] | Fetal Blood |
ConceptMap.group[0].element[8].target[0].code[0] | 737357006 |
ConceptMap.group[0].element[8].target[0].display[0] | Fetal blood specimen |
ConceptMap.group[0].element[8].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[9].code[0] | fibroblasts |
ConceptMap.group[0].element[9].display[0] | Fibroblasts |
ConceptMap.group[0].element[9].target[0].code[0] | 119333000 |
ConceptMap.group[0].element[9].target[0].display[0] | Fibroblast specimen |
ConceptMap.group[0].element[9].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[10].code[0] | heart |
ConceptMap.group[0].element[10].display[0] | Heart |
ConceptMap.group[0].element[10].target[0].code[0] | 127462005 |
ConceptMap.group[0].element[10].target[0].display[0] | Specimen from heart (specimen) |
ConceptMap.group[0].element[10].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[11].code[0] | kidney |
ConceptMap.group[0].element[11].display[0] | Kidney |
ConceptMap.group[0].element[11].target[0].code[0] | 127473003 |
ConceptMap.group[0].element[11].target[0].display[0] | Specimen from kidney (specimen) |
ConceptMap.group[0].element[11].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[12].code[0] | liver |
ConceptMap.group[0].element[12].display[0] | Liver |
ConceptMap.group[0].element[12].target[0].code[0] | 119383005 |
ConceptMap.group[0].element[12].target[0].display[0] | Specimen from liver (specimen) |
ConceptMap.group[0].element[12].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[13].code[0] | lymph-node |
ConceptMap.group[0].element[13].display[0] | Lymph Node |
ConceptMap.group[0].element[13].target[0].code[0] | 258589002 |
ConceptMap.group[0].element[13].target[0].display[0] | Lymph node specimen |
ConceptMap.group[0].element[13].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[14].code[0] | other |
ConceptMap.group[0].element[14].display[0] | Other |
ConceptMap.group[0].element[14].target[0].code[0] | 123038009 |
ConceptMap.group[0].element[14].target[0].display[0] | Specimen (specimen) |
ConceptMap.group[0].element[14].target[0].equivalence[0] | wider |
ConceptMap.group[0].element[14].target[0].comment[0] | Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found. |
ConceptMap.group[0].element[15].code[0] | pericardial |
ConceptMap.group[0].element[15].display[0] | Pericardial |
ConceptMap.group[0].element[15].target[0].code[0] | 122571007 |
ConceptMap.group[0].element[15].target[0].display[0] | Pericardial fluid specimen (specimen) |
ConceptMap.group[0].element[15].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[16].code[0] | peritoneal |
ConceptMap.group[0].element[16].display[0] | Peritoneal |
ConceptMap.group[0].element[16].target[0].code[0] | 430250001 |
ConceptMap.group[0].element[16].target[0].display[0] | Specimen from peritoneum (specimen) |
ConceptMap.group[0].element[16].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[17].code[0] | pleural-fluid |
ConceptMap.group[0].element[17].display[0] | Pleural Fluid |
ConceptMap.group[0].element[17].target[0].code[0] | 418564007 |
ConceptMap.group[0].element[17].target[0].display[0] | Pleural fluid specimen (specimen) |
ConceptMap.group[0].element[17].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[18].code[0] | products of conception |
ConceptMap.group[0].element[18].display[0] | Products Of Conception |
ConceptMap.group[0].element[18].target[0].code[0] | 258428005 |
ConceptMap.group[0].element[18].target[0].display[0] | Products of conception tissue specimen |
ConceptMap.group[0].element[18].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[19].code[0] | saliva |
ConceptMap.group[0].element[19].display[0] | Saliva |
ConceptMap.group[0].element[19].target[0].code[0] | 119342007 |
ConceptMap.group[0].element[19].target[0].display[0] | Saliva specimen (specimen) |
ConceptMap.group[0].element[19].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[20].code[0] | skeletal muscle |
ConceptMap.group[0].element[20].display[0] | Skeletal Muscle |
ConceptMap.group[0].element[20].target[0].code[0] | 119331003 |
ConceptMap.group[0].element[20].target[0].display[0] | Skeletal muscle specimen (specimen) |
ConceptMap.group[0].element[20].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[21].code[0] | skin |
ConceptMap.group[0].element[21].display[0] | Skin |
ConceptMap.group[0].element[21].target[0].code[0] | 608969007 |
ConceptMap.group[0].element[21].target[0].display[0] | Specimen from skin (specimen) |
ConceptMap.group[0].element[21].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[22].code[0] | spleen |
ConceptMap.group[0].element[22].display[0] | Spleen |
ConceptMap.group[0].element[22].target[0].code[0] | 433308004 |
ConceptMap.group[0].element[22].target[0].display[0] | Specimen from spleen (specimen) |
ConceptMap.group[0].element[22].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[23].code[0] | tumour |
ConceptMap.group[0].element[23].display[0] | Tumour |
ConceptMap.group[0].element[23].target[0].code[0] | 258435002 |
ConceptMap.group[0].element[23].target[0].display[0] | Tumor tissue specimen (specimen) |
ConceptMap.group[0].element[23].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[24].code[0] | urine |
ConceptMap.group[0].element[24].display[0] | Urine |
ConceptMap.group[0].element[24].target[0].code[0] | 122575003 |
ConceptMap.group[0].element[24].target[0].display[0] | Urine specimen (specimen) |
ConceptMap.group[0].element[24].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-primarysample" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-primarysample" /> <version value="0.0.1" /> <name value="GenomicsPrimarySample" /> <title value="Genomics Primary Sample" /> <status value="draft" /> <date value="2024-08-15T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="amniotic-fluid" /> <display value="Amniotic Fluid" /> <target> <code value="119373006" /> <display value="Amniotic fluid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="blood" /> <display value="Blood" /> <target> <code value="119297000" /> <display value="Blood specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="bone-marrow-trephine" /> <display value="Bone Marrow Trephine" /> <target> <code value="258585008" /> <display value="Bone marrow trephine specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="bone-marrrow-aspirate" /> <display value="Bone Marrrow Aspirate" /> <target> <code value="396997002" /> <display value="Specimen from bone marrow obtained by aspiration" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="buccals-smear" /> <display value="Buccals Smear" /> <target> <code value="258564008" /> <display value="Buccal smear specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="cerebrospinal-fluid" /> <display value="Cerebrospinal Fluid" /> <target> <code value="258450006" /> <display value="Cerebrospinal fluid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="cord-blood" /> <display value="Cord Blood" /> <target> <code value="122556008" /> <display value="Cord blood specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="chorionic-villus-sampling" /> <display value="Chorionic Villus Sampling" /> <target> <code value="258565009" /> <display value="Chorionic villi specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="fetal-blood" /> <display value="Fetal Blood" /> <target> <code value="737357006" /> <display value="Fetal blood specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="fibroblasts" /> <display value="Fibroblasts" /> <target> <code value="119333000" /> <display value="Fibroblast specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="heart" /> <display value="Heart" /> <target> <code value="127462005" /> <display value="Specimen from heart (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="kidney" /> <display value="Kidney" /> <target> <code value="127473003" /> <display value="Specimen from kidney (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="liver" /> <display value="Liver" /> <target> <code value="119383005" /> <display value="Specimen from liver (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="lymph-node" /> <display value="Lymph Node" /> <target> <code value="258589002" /> <display value="Lymph node specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="other" /> <display value="Other" /> <target> <code value="123038009" /> <display value="Specimen (specimen)" /> <equivalence value="wider" /> <comment value="Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." /> </target> </element> <element> <code value="pericardial" /> <display value="Pericardial" /> <target> <code value="122571007" /> <display value="Pericardial fluid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="peritoneal" /> <display value="Peritoneal" /> <target> <code value="430250001" /> <display value="Specimen from peritoneum (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="pleural-fluid" /> <display value="Pleural Fluid" /> <target> <code value="418564007" /> <display value="Pleural fluid specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="products of conception" /> <display value="Products Of Conception" /> <target> <code value="258428005" /> <display value="Products of conception tissue specimen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="saliva" /> <display value="Saliva" /> <target> <code value="119342007" /> <display value="Saliva specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="skeletal muscle" /> <display value="Skeletal Muscle" /> <target> <code value="119331003" /> <display value="Skeletal muscle specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="skin" /> <display value="Skin" /> <target> <code value="608969007" /> <display value="Specimen from skin (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="spleen" /> <display value="Spleen" /> <target> <code value="433308004" /> <display value="Specimen from spleen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="tumour" /> <display value="Tumour" /> <target> <code value="258435002" /> <display value="Tumor tissue specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="urine" /> <display value="Urine" /> <target> <code value="122575003" /> <display value="Urine specimen (specimen)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-primarysample", "url": "https://fhir.nhs.uk/ConceptMap/genomics-primarysample", "version": "0.0.1", "name": "GenomicsPrimarySample", "title": "Genomics Primary Sample", "status": "draft", "date": "2024-08-15T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "amniotic-fluid", "display": "Amniotic Fluid", "target": [ { "code": "119373006", "display": "Amniotic fluid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "blood", "display": "Blood", "target": [ { "code": "119297000", "display": "Blood specimen", "equivalence": "equivalent" } ] }, { "code": "bone-marrow-trephine", "display": "Bone Marrow Trephine", "target": [ { "code": "258585008", "display": "Bone marrow trephine specimen", "equivalence": "equivalent" } ] }, { "code": "bone-marrrow-aspirate", "display": "Bone Marrrow Aspirate", "target": [ { "code": "396997002", "display": "Specimen from bone marrow obtained by aspiration", "equivalence": "equivalent" } ] }, { "code": "buccals-smear", "display": "Buccals Smear", "target": [ { "code": "258564008", "display": "Buccal smear specimen", "equivalence": "equivalent" } ] }, { "code": "cerebrospinal-fluid", "display": "Cerebrospinal Fluid", "target": [ { "code": "258450006", "display": "Cerebrospinal fluid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "cord-blood", "display": "Cord Blood", "target": [ { "code": "122556008", "display": "Cord blood specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "chorionic-villus-sampling", "display": "Chorionic Villus Sampling", "target": [ { "code": "258565009", "display": "Chorionic villi specimen", "equivalence": "equivalent" } ] }, { "code": "fetal-blood", "display": "Fetal Blood", "target": [ { "code": "737357006", "display": "Fetal blood specimen", "equivalence": "equivalent" } ] }, { "code": "fibroblasts", "display": "Fibroblasts", "target": [ { "code": "119333000", "display": "Fibroblast specimen", "equivalence": "equivalent" } ] }, { "code": "heart", "display": "Heart", "target": [ { "code": "127462005", "display": "Specimen from heart (specimen)", "equivalence": "equivalent" } ] }, { "code": "kidney", "display": "Kidney", "target": [ { "code": "127473003", "display": "Specimen from kidney (specimen)", "equivalence": "equivalent" } ] }, { "code": "liver", "display": "Liver", "target": [ { "code": "119383005", "display": "Specimen from liver (specimen)", "equivalence": "equivalent" } ] }, { "code": "lymph-node", "display": "Lymph Node", "target": [ { "code": "258589002", "display": "Lymph node specimen", "equivalence": "equivalent" } ] }, { "code": "other", "display": "Other", "target": [ { "code": "123038009", "display": "Specimen (specimen)", "equivalence": "wider", "comment": "Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." } ] }, { "code": "pericardial", "display": "Pericardial", "target": [ { "code": "122571007", "display": "Pericardial fluid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "peritoneal", "display": "Peritoneal", "target": [ { "code": "430250001", "display": "Specimen from peritoneum (specimen)", "equivalence": "equivalent" } ] }, { "code": "pleural-fluid", "display": "Pleural Fluid", "target": [ { "code": "418564007", "display": "Pleural fluid specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "products of conception", "display": "Products Of Conception", "target": [ { "code": "258428005", "display": "Products of conception tissue specimen", "equivalence": "equivalent" } ] }, { "code": "saliva", "display": "Saliva", "target": [ { "code": "119342007", "display": "Saliva specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "skeletal muscle", "display": "Skeletal Muscle", "target": [ { "code": "119331003", "display": "Skeletal muscle specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "skin", "display": "Skin", "target": [ { "code": "608969007", "display": "Specimen from skin (specimen)", "equivalence": "equivalent" } ] }, { "code": "spleen", "display": "Spleen", "target": [ { "code": "433308004", "display": "Specimen from spleen (specimen)", "equivalence": "equivalent" } ] }, { "code": "tumour", "display": "Tumour", "target": [ { "code": "258435002", "display": "Tumor tissue specimen (specimen)", "equivalence": "equivalent" } ] }, { "code": "urine", "display": "Urine", "target": [ { "code": "122575003", "display": "Urine specimen (specimen)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Specimen Primary Sample State
Usage |
---|
ConceptMap used for the translation and recording the concepts on method of sample preservation. This is intended for the element Specimen.condition |
HTML View
Source | Equivalence | Destination | Comment |
blood-spot (Blood spot) | equivalent | blood-spot (Blood spot) | |
FFPE (Formalin-fixed paraffin-embedded) | equivalent | FFPE (Formalin-fixed paraffin-embedded) | |
fresh (Fresh) | equivalent | fresh (Fresh) | |
frozen (Frozen) | equivalent | frozen (Frozen) | |
other (Other) | equivalent | other (Other) | Any other suitable sample condition that is an alternative to concepts provided in this Conceptmap. This should be provided by free text. |
Table View
ConceptMap.id[0] | genomics-primary-sample-state |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-primary-sample-state |
ConceptMap.version[0] | 0.0.1 |
ConceptMap.name[0] | GenomicsPrimarySampleState |
ConceptMap.title[0] | Genomics Primary Sample State |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-10-04T00:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording the concepts on method of sample preservation. This is intended for the element Specimen.condition |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState |
ConceptMap.group[0].element[0].code[0] | blood-spot |
ConceptMap.group[0].element[0].display[0] | Blood spot |
ConceptMap.group[0].element[0].target[0].code[0] | blood-spot |
ConceptMap.group[0].element[0].target[0].display[0] | Blood spot |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | FFPE |
ConceptMap.group[0].element[1].display[0] | Formalin-fixed paraffin-embedded |
ConceptMap.group[0].element[1].target[0].code[0] | FFPE |
ConceptMap.group[0].element[1].target[0].display[0] | Formalin-fixed paraffin-embedded |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | fresh |
ConceptMap.group[0].element[2].display[0] | Fresh |
ConceptMap.group[0].element[2].target[0].code[0] | fresh |
ConceptMap.group[0].element[2].target[0].display[0] | Fresh |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | frozen |
ConceptMap.group[0].element[3].display[0] | Frozen |
ConceptMap.group[0].element[3].target[0].code[0] | frozen |
ConceptMap.group[0].element[3].target[0].display[0] | Frozen |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | other |
ConceptMap.group[0].element[4].display[0] | Other |
ConceptMap.group[0].element[4].target[0].code[0] | other |
ConceptMap.group[0].element[4].target[0].display[0] | Other |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].target[0].comment[0] | Any other suitable sample condition that is an alternative to concepts provided in this Conceptmap. This should be provided by free text. |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-primary-sample-state" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-primary-sample-state" /> <version value="0.0.1" /> <name value="GenomicsPrimarySampleState" /> <title value="Genomics Primary Sample State" /> <status value="draft" /> <date value="2024-10-04T00:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording the concepts on method of sample preservation. This is intended for the element Specimen.condition" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState" /> <element> <code value="blood-spot" /> <display value="Blood spot" /> <target> <code value="blood-spot" /> <display value="Blood spot" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="FFPE" /> <display value="Formalin-fixed paraffin-embedded" /> <target> <code value="FFPE" /> <display value="Formalin-fixed paraffin-embedded" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="fresh" /> <display value="Fresh" /> <target> <code value="fresh" /> <display value="Fresh" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="frozen" /> <display value="Frozen" /> <target> <code value="frozen" /> <display value="Frozen" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="other" /> <display value="Other" /> <target> <code value="other" /> <display value="Other" /> <equivalence value="equivalent" /> <comment value="Any other suitable sample condition that is an alternative to concepts provided in this Conceptmap. This should be provided by free text." /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-primary-sample-state", "url": "https://fhir.nhs.uk/ConceptMap/genomics-primary-sample-state", "version": "0.0.1", "name": "GenomicsPrimarySampleState", "title": "Genomics Primary Sample State", "status": "draft", "date": "2024-10-04T00:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording the concepts on method of sample preservation. This is intended for the element Specimen.condition", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "https://fhir.hl7.org.uk/ValueSet/UKCore-SampleState", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "https://fhir.hl7.org.uk/CodeSystem/UKCore-PrimarySampleState", "element": [ { "code": "blood-spot", "display": "Blood spot", "target": [ { "code": "blood-spot", "display": "Blood spot", "equivalence": "equivalent" } ] }, { "code": "FFPE", "display": "Formalin-fixed paraffin-embedded", "target": [ { "code": "FFPE", "display": "Formalin-fixed paraffin-embedded", "equivalence": "equivalent" } ] }, { "code": "fresh", "display": "Fresh", "target": [ { "code": "fresh", "display": "Fresh", "equivalence": "equivalent" } ] }, { "code": "frozen", "display": "Frozen", "target": [ { "code": "frozen", "display": "Frozen", "equivalence": "equivalent" } ] }, { "code": "other", "display": "Other", "target": [ { "code": "other", "display": "Other", "equivalence": "equivalent", "comment": "Any other suitable sample condition that is an alternative to concepts provided in this Conceptmap. This should be provided by free text." } ] } ] } ] }
ConceptMap Genomic Sample Preparation
Usage |
---|
ConceptMap used for the translation and recording the concepts on method of sample preparation. This is intended for the element Specimen.processing.procedure |
HTML View
to http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2071388002%20
Source | Equivalence | Destination | Comment |
CD138+ (CD138+) | equivalent | 798001000000102 (CD138 count (procedure)) | |
CD15+ (CD15+) | equivalent | 785421000000106 (CD15 count (procedure)) | |
CD19+ (CD19+) | equivalent | 408228002 (Absolute CD19 count (procedure)) | |
CD3+ (CD3+) | equivalent | 313447006 (Absolute CD3 count procedure (procedure)) | |
CD34+ (CD34+) | equivalent | 313505009 (CD34 stem cell count procedure (procedure)) | |
CD5+ (CD5+) | equivalent | 413790005 (CD5 count (procedure)) | |
DNA (DNA) | equivalent | 702943006 (DNA extraction) | |
microdissection (Microdissection) | equivalent | 787995009 (Microdissection of tissue specimen (procedure)) | |
other (Other) | wider | 71388002 (Procedure (procedure)) | Any other suitable procedure that is an alternative to the concepts provided in this code. This should be provided by free text. |
plasma (Plasma) | equivalent | 407663004 (Percentage plasma cell count (procedure)) | |
RNA (RNA) | equivalent | 702944000 (RNA extraction) | |
white-cells (White Cells) | equivalent | 302560003 (Determination of percentage differential white blood cells (procedure)) |
Table View
ConceptMap.id[0] | genomics-samplepreparation |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-samplepreparation |
ConceptMap.version[0] | 0.0.2 |
ConceptMap.name[0] | GenomicsSamplePreparation |
ConceptMap.title[0] | Genomics Sample Preparation |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-10-01T15:00:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording the concepts on method of sample preparation. This is intended for the element Specimen.processing.procedure |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2071388002%20 |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | CD138+ |
ConceptMap.group[0].element[0].display[0] | CD138+ |
ConceptMap.group[0].element[0].target[0].code[0] | 798001000000102 |
ConceptMap.group[0].element[0].target[0].display[0] | CD138 count (procedure) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | CD15+ |
ConceptMap.group[0].element[1].display[0] | CD15+ |
ConceptMap.group[0].element[1].target[0].code[0] | 785421000000106 |
ConceptMap.group[0].element[1].target[0].display[0] | CD15 count (procedure) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | CD19+ |
ConceptMap.group[0].element[2].display[0] | CD19+ |
ConceptMap.group[0].element[2].target[0].code[0] | 408228002 |
ConceptMap.group[0].element[2].target[0].display[0] | Absolute CD19 count (procedure) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | CD3+ |
ConceptMap.group[0].element[3].display[0] | CD3+ |
ConceptMap.group[0].element[3].target[0].code[0] | 313447006 |
ConceptMap.group[0].element[3].target[0].display[0] | Absolute CD3 count procedure (procedure) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | CD34+ |
ConceptMap.group[0].element[4].display[0] | CD34+ |
ConceptMap.group[0].element[4].target[0].code[0] | 313505009 |
ConceptMap.group[0].element[4].target[0].display[0] | CD34 stem cell count procedure (procedure) |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | CD5+ |
ConceptMap.group[0].element[5].display[0] | CD5+ |
ConceptMap.group[0].element[5].target[0].code[0] | 413790005 |
ConceptMap.group[0].element[5].target[0].display[0] | CD5 count (procedure) |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | DNA |
ConceptMap.group[0].element[6].display[0] | DNA |
ConceptMap.group[0].element[6].target[0].code[0] | 702943006 |
ConceptMap.group[0].element[6].target[0].display[0] | DNA extraction |
ConceptMap.group[0].element[6].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[7].code[0] | microdissection |
ConceptMap.group[0].element[7].display[0] | Microdissection |
ConceptMap.group[0].element[7].target[0].code[0] | 787995009 |
ConceptMap.group[0].element[7].target[0].display[0] | Microdissection of tissue specimen (procedure) |
ConceptMap.group[0].element[7].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[8].code[0] | other |
ConceptMap.group[0].element[8].display[0] | Other |
ConceptMap.group[0].element[8].target[0].code[0] | 71388002 |
ConceptMap.group[0].element[8].target[0].display[0] | Procedure (procedure) |
ConceptMap.group[0].element[8].target[0].equivalence[0] | wider |
ConceptMap.group[0].element[8].target[0].comment[0] | Any other suitable procedure that is an alternative to the concepts provided in this code. This should be provided by free text. |
ConceptMap.group[0].element[9].code[0] | plasma |
ConceptMap.group[0].element[9].display[0] | Plasma |
ConceptMap.group[0].element[9].target[0].code[0] | 407663004 |
ConceptMap.group[0].element[9].target[0].display[0] | Percentage plasma cell count (procedure) |
ConceptMap.group[0].element[9].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[10].code[0] | RNA |
ConceptMap.group[0].element[10].display[0] | RNA |
ConceptMap.group[0].element[10].target[0].code[0] | 702944000 |
ConceptMap.group[0].element[10].target[0].display[0] | RNA extraction |
ConceptMap.group[0].element[10].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[11].code[0] | white-cells |
ConceptMap.group[0].element[11].display[0] | White Cells |
ConceptMap.group[0].element[11].target[0].code[0] | 302560003 |
ConceptMap.group[0].element[11].target[0].display[0] | Determination of percentage differential white blood cells (procedure) |
ConceptMap.group[0].element[11].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-samplepreparation" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-samplepreparation" /> <version value="0.0.2" /> <name value="GenomicsSamplePreparation" /> <title value="Genomics Sample Preparation" /> <status value="draft" /> <date value="2024-10-01T15:00:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording the concepts on method of sample preparation. This is intended for the element Specimen.processing.procedure" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2071388002%20" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="CD138+" /> <display value="CD138+" /> <target> <code value="798001000000102" /> <display value="CD138 count (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="CD15+" /> <display value="CD15+" /> <target> <code value="785421000000106" /> <display value="CD15 count (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="CD19+" /> <display value="CD19+" /> <target> <code value="408228002" /> <display value="Absolute CD19 count (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="CD3+" /> <display value="CD3+" /> <target> <code value="313447006" /> <display value="Absolute CD3 count procedure (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="CD34+" /> <display value="CD34+" /> <target> <code value="313505009" /> <display value="CD34 stem cell count procedure (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="CD5+" /> <display value="CD5+" /> <target> <code value="413790005" /> <display value="CD5 count (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="DNA" /> <display value="DNA" /> <target> <code value="702943006" /> <display value="DNA extraction" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="microdissection" /> <display value="Microdissection" /> <target> <code value="787995009" /> <display value="Microdissection of tissue specimen (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="other" /> <display value="Other" /> <target> <code value="71388002" /> <display value="Procedure (procedure)" /> <equivalence value="wider" /> <comment value="Any other suitable procedure that is an alternative to the concepts provided in this code. This should be provided by free text." /> </target> </element> <element> <code value="plasma" /> <display value="Plasma" /> <target> <code value="407663004" /> <display value="Percentage plasma cell count (procedure)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="RNA" /> <display value="RNA" /> <target> <code value="702944000" /> <display value="RNA extraction" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="white-cells" /> <display value="White Cells" /> <target> <code value="302560003" /> <display value="Determination of percentage differential white blood cells (procedure)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-samplepreparation", "url": "https://fhir.nhs.uk/ConceptMap/genomics-samplepreparation", "version": "0.0.2", "name": "GenomicsSamplePreparation", "title": "Genomics Sample Preparation", "status": "draft", "date": "2024-10-01T15:00:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording the concepts on method of sample preparation. This is intended for the element Specimen.processing.procedure", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2071388002%20", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "CD138+", "display": "CD138+", "target": [ { "code": "798001000000102", "display": "CD138 count (procedure)", "equivalence": "equivalent" } ] }, { "code": "CD15+", "display": "CD15+", "target": [ { "code": "785421000000106", "display": "CD15 count (procedure)", "equivalence": "equivalent" } ] }, { "code": "CD19+", "display": "CD19+", "target": [ { "code": "408228002", "display": "Absolute CD19 count (procedure)", "equivalence": "equivalent" } ] }, { "code": "CD3+", "display": "CD3+", "target": [ { "code": "313447006", "display": "Absolute CD3 count procedure (procedure)", "equivalence": "equivalent" } ] }, { "code": "CD34+", "display": "CD34+", "target": [ { "code": "313505009", "display": "CD34 stem cell count procedure (procedure)", "equivalence": "equivalent" } ] }, { "code": "CD5+", "display": "CD5+", "target": [ { "code": "413790005", "display": "CD5 count (procedure)", "equivalence": "equivalent" } ] }, { "code": "DNA", "display": "DNA", "target": [ { "code": "702943006", "display": "DNA extraction", "equivalence": "equivalent" } ] }, { "code": "microdissection", "display": "Microdissection", "target": [ { "code": "787995009", "display": "Microdissection of tissue specimen (procedure)", "equivalence": "equivalent" } ] }, { "code": "other", "display": "Other", "target": [ { "code": "71388002", "display": "Procedure (procedure)", "equivalence": "wider", "comment": "Any other suitable procedure that is an alternative to the concepts provided in this code. This should be provided by free text." } ] }, { "code": "plasma", "display": "Plasma", "target": [ { "code": "407663004", "display": "Percentage plasma cell count (procedure)", "equivalence": "equivalent" } ] }, { "code": "RNA", "display": "RNA", "target": [ { "code": "702944000", "display": "RNA extraction", "equivalence": "equivalent" } ] }, { "code": "white-cells", "display": "White Cells", "target": [ { "code": "302560003", "display": "Determination of percentage differential white blood cells (procedure)", "equivalence": "equivalent" } ] } ] } ] }
ConceptMap Genomic Risk Reason for Specimen Special Handling
Usage |
---|
ConceptMap used for the translation and recording of the risk reason for specimen special handling . This is intended for the element Specimen.collection.extension:specimen-specialHandling.valueCoding.code |
HTML View
to SNOMED_CT
Source | Equivalence | Destination |
anthrax (Anthrax) | equivalent | 409498004 (Anthrax (disorder)) |
Brucellosis (Brucellosis) | equivalent | 75702008 (Brucellosis (disorder)) |
ecoli0157 (E coli 0157) | equivalent | 127531000119106 (Infection caused by Escherichia coli O157 (disorder)) |
haemolytic-uraemic-syndrome (Haemolytic Uraemic Syndrome) | equivalent | 111407006 (Hemolytic uremic syndrome (disorder)) |
hiv-infection (HIV Infection) | equivalent | 86406008 (Human immunodeficiency virus infection (disorder)) |
iv-drug-users (IV Drug Users) | equivalent | 228388006 (Intravenous drug user (finding)) |
jakob-creutzfeldt-disease (Jakob-Creutzfeldt Disease) | equivalent | 792004 (Jakob-Creutzfeldt disease (disorder)) |
melioidosis (Melioidosis) | equivalent | 428111003 (Melioidosis (disorder)) |
tuberculosis (Tuberculosis) | equivalent | 56717001 (Tuberculosis (disorder)) |
typhoid-fever (Typhoid Fever) | equivalent | 4834000 (Typhoid fever (disorder)) |
viral-hepatitis (Viral Hepatitis) | equivalent | 3738000 (Viral hepatitis (disorder)) |
Table View
ConceptMap.id[0] | genomics-risk-reason-for-specimen-specialhandling |
ConceptMap.url[0] | https://fhir.nhs.uk/ConceptMap/genomics-risk-reason-for-specimen-specialhandling |
ConceptMap.version[0] | 0.2.0 |
ConceptMap.name[0] | GenomicsRiskReasonForSpecimenSpecialHandling |
ConceptMap.title[0] | Genomics Risk Reason for Specimen Special Handling |
ConceptMap.status[0] | draft |
ConceptMap.date[0] | 2024-08-09T18:45:00.000Z |
ConceptMap.publisher[0] | NHS England |
ConceptMap.contact[0].name[0] | NHS England |
ConceptMap.contact[0].telecom[0].system[0] | |
ConceptMap.contact[0].telecom[0].value[0] | interoperabilityteam@nhs.net |
ConceptMap.description[0] | A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec. |
ConceptMap.purpose[0] | ConceptMap used for the translation and recording of the risk reason for specimen special handling . This is intended for the element Specimen.collection.extension:specimen-specialHandling.valueCoding.code |
ConceptMap.copyright[0] | Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
ConceptMap.target[0] | http://snomed.info/sct |
ConceptMap.group[0].source[0] | https://future.nhs.uk/NHSgenomics/view?objectId=222250117 |
ConceptMap.group[0].target[0] | http://snomed.info/sct |
ConceptMap.group[0].element[0].code[0] | anthrax |
ConceptMap.group[0].element[0].display[0] | Anthrax |
ConceptMap.group[0].element[0].target[0].code[0] | 409498004 |
ConceptMap.group[0].element[0].target[0].display[0] | Anthrax (disorder) |
ConceptMap.group[0].element[0].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[1].code[0] | Brucellosis |
ConceptMap.group[0].element[1].display[0] | Brucellosis |
ConceptMap.group[0].element[1].target[0].code[0] | 75702008 |
ConceptMap.group[0].element[1].target[0].display[0] | Brucellosis (disorder) |
ConceptMap.group[0].element[1].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[2].code[0] | ecoli0157 |
ConceptMap.group[0].element[2].display[0] | E coli 0157 |
ConceptMap.group[0].element[2].target[0].code[0] | 127531000119106 |
ConceptMap.group[0].element[2].target[0].display[0] | Infection caused by Escherichia coli O157 (disorder) |
ConceptMap.group[0].element[2].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[3].code[0] | haemolytic-uraemic-syndrome |
ConceptMap.group[0].element[3].display[0] | Haemolytic Uraemic Syndrome |
ConceptMap.group[0].element[3].target[0].code[0] | 111407006 |
ConceptMap.group[0].element[3].target[0].display[0] | Hemolytic uremic syndrome (disorder) |
ConceptMap.group[0].element[3].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[4].code[0] | hiv-infection |
ConceptMap.group[0].element[4].display[0] | HIV Infection |
ConceptMap.group[0].element[4].target[0].code[0] | 86406008 |
ConceptMap.group[0].element[4].target[0].display[0] | Human immunodeficiency virus infection (disorder) |
ConceptMap.group[0].element[4].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[5].code[0] | iv-drug-users |
ConceptMap.group[0].element[5].display[0] | IV Drug Users |
ConceptMap.group[0].element[5].target[0].code[0] | 228388006 |
ConceptMap.group[0].element[5].target[0].display[0] | Intravenous drug user (finding) |
ConceptMap.group[0].element[5].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[6].code[0] | jakob-creutzfeldt-disease |
ConceptMap.group[0].element[6].display[0] | Jakob-Creutzfeldt Disease |
ConceptMap.group[0].element[6].target[0].code[0] | 792004 |
ConceptMap.group[0].element[6].target[0].display[0] | Jakob-Creutzfeldt disease (disorder) |
ConceptMap.group[0].element[6].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[7].code[0] | melioidosis |
ConceptMap.group[0].element[7].display[0] | Melioidosis |
ConceptMap.group[0].element[7].target[0].code[0] | 428111003 |
ConceptMap.group[0].element[7].target[0].display[0] | Melioidosis (disorder) |
ConceptMap.group[0].element[7].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[8].code[0] | tuberculosis |
ConceptMap.group[0].element[8].display[0] | Tuberculosis |
ConceptMap.group[0].element[8].target[0].code[0] | 56717001 |
ConceptMap.group[0].element[8].target[0].display[0] | Tuberculosis (disorder) |
ConceptMap.group[0].element[8].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[9].code[0] | typhoid-fever |
ConceptMap.group[0].element[9].display[0] | Typhoid Fever |
ConceptMap.group[0].element[9].target[0].code[0] | 4834000 |
ConceptMap.group[0].element[9].target[0].display[0] | Typhoid fever (disorder) |
ConceptMap.group[0].element[9].target[0].equivalence[0] | equivalent |
ConceptMap.group[0].element[10].code[0] | viral-hepatitis |
ConceptMap.group[0].element[10].display[0] | Viral Hepatitis |
ConceptMap.group[0].element[10].target[0].code[0] | 3738000 |
ConceptMap.group[0].element[10].target[0].display[0] | Viral hepatitis (disorder) |
ConceptMap.group[0].element[10].target[0].equivalence[0] | equivalent |
XML View
<ConceptMap xmlns="http://hl7.org/fhir"> <id value="genomics-risk-reason-for-specimen-specialhandling" /> <url value="https://fhir.nhs.uk/ConceptMap/genomics-risk-reason-for-specimen-specialhandling" /> <version value="0.2.0" /> <name value="GenomicsRiskReasonForSpecimenSpecialHandling" /> <title value="Genomics Risk Reason for Specimen Special Handling" /> <status value="draft" /> <date value="2024-08-09T18:45:00.000Z" /> <publisher value="NHS England" /> <contact> <name value="NHS England" /> <telecom> <system value="email" /> <value value="interoperabilityteam@nhs.net" /> </telecom> </contact> <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." /> <purpose value="ConceptMap used for the translation and recording of the risk reason for specimen special handling . This is intended for the element Specimen.collection.extension:specimen-specialHandling.valueCoding.code" /> <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <targetUri value="http://snomed.info/sct" /> <group> <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" /> <target value="http://snomed.info/sct" /> <element> <code value="anthrax" /> <display value="Anthrax" /> <target> <code value="409498004" /> <display value="Anthrax (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="Brucellosis" /> <display value="Brucellosis" /> <target> <code value="75702008" /> <display value="Brucellosis (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="ecoli0157" /> <display value="E coli 0157" /> <target> <code value="127531000119106" /> <display value="Infection caused by Escherichia coli O157 (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="haemolytic-uraemic-syndrome" /> <display value="Haemolytic Uraemic Syndrome" /> <target> <code value="111407006" /> <display value="Hemolytic uremic syndrome (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="hiv-infection" /> <display value="HIV Infection" /> <target> <code value="86406008" /> <display value="Human immunodeficiency virus infection (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="iv-drug-users" /> <display value="IV Drug Users" /> <target> <code value="228388006" /> <display value="Intravenous drug user (finding)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="jakob-creutzfeldt-disease" /> <display value="Jakob-Creutzfeldt Disease" /> <target> <code value="792004" /> <display value="Jakob-Creutzfeldt disease (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="melioidosis" /> <display value="Melioidosis" /> <target> <code value="428111003" /> <display value="Melioidosis (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="tuberculosis" /> <display value="Tuberculosis" /> <target> <code value="56717001" /> <display value="Tuberculosis (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="typhoid-fever" /> <display value="Typhoid Fever" /> <target> <code value="4834000" /> <display value="Typhoid fever (disorder)" /> <equivalence value="equivalent" /> </target> </element> <element> <code value="viral-hepatitis" /> <display value="Viral Hepatitis" /> <target> <code value="3738000" /> <display value="Viral hepatitis (disorder)" /> <equivalence value="equivalent" /> </target> </element> </group> </ConceptMap>
JSON View
{ "resourceType": "ConceptMap", "id": "genomics-risk-reason-for-specimen-specialhandling", "url": "https://fhir.nhs.uk/ConceptMap/genomics-risk-reason-for-specimen-specialhandling", "version": "0.2.0", "name": "GenomicsRiskReasonForSpecimenSpecialHandling", "title": "Genomics Risk Reason for Specimen Special Handling", "status": "draft", "date": "2024-08-09T18:45:00.000Z", "publisher": "NHS England", "contact": [ { "name": "NHS England", "telecom": [ { "system": "email", "value": "interoperabilityteam@nhs.net" } ] } ], "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of the risk reason for specimen special handling . This is intended for the element Specimen.collection.extension:specimen-specialHandling.valueCoding.code", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "targetUri": "http://snomed.info/sct", "group": [ { "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117", "target": "http://snomed.info/sct", "element": [ { "code": "anthrax", "display": "Anthrax", "target": [ { "code": "409498004", "display": "Anthrax (disorder)", "equivalence": "equivalent" } ] }, { "code": "Brucellosis", "display": "Brucellosis", "target": [ { "code": "75702008", "display": "Brucellosis (disorder)", "equivalence": "equivalent" } ] }, { "code": "ecoli0157", "display": "E coli 0157", "target": [ { "code": "127531000119106", "display": "Infection caused by Escherichia coli O157 (disorder)", "equivalence": "equivalent" } ] }, { "code": "haemolytic-uraemic-syndrome", "display": "Haemolytic Uraemic Syndrome", "target": [ { "code": "111407006", "display": "Hemolytic uremic syndrome (disorder)", "equivalence": "equivalent" } ] }, { "code": "hiv-infection", "display": "HIV Infection", "target": [ { "code": "86406008", "display": "Human immunodeficiency virus infection (disorder)", "equivalence": "equivalent" } ] }, { "code": "iv-drug-users", "display": "IV Drug Users", "target": [ { "code": "228388006", "display": "Intravenous drug user (finding)", "equivalence": "equivalent" } ] }, { "code": "jakob-creutzfeldt-disease", "display": "Jakob-Creutzfeldt Disease", "target": [ { "code": "792004", "display": "Jakob-Creutzfeldt disease (disorder)", "equivalence": "equivalent" } ] }, { "code": "melioidosis", "display": "Melioidosis", "target": [ { "code": "428111003", "display": "Melioidosis (disorder)", "equivalence": "equivalent" } ] }, { "code": "tuberculosis", "display": "Tuberculosis", "target": [ { "code": "56717001", "display": "Tuberculosis (disorder)", "equivalence": "equivalent" } ] }, { "code": "typhoid-fever", "display": "Typhoid Fever", "target": [ { "code": "4834000", "display": "Typhoid fever (disorder)", "equivalence": "equivalent" } ] }, { "code": "viral-hepatitis", "display": "Viral Hepatitis", "target": [ { "code": "3738000", "display": "Viral hepatitis (disorder)", "equivalence": "equivalent" } ] } ] } ] }