Notice
- Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
- This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.
CodeSystem Genomic Sample Category
Usage
A CodeSystem to record the categorisation of a specimen, either sourced from a Tumour or Germline.
HTML View
Table View
CodeSystem.id[0] | UKCore-SampleCategory |
CodeSystem.url[0] | https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory |
CodeSystem.version[0] | 2.0.0 |
CodeSystem.name[0] | UKCoreSampleCategory |
CodeSystem.title[0] | UK Core Sample Category |
CodeSystem.status[0] | active |
CodeSystem.date[0] | 2024-08-05 |
CodeSystem.publisher[0] | HL7 UK |
CodeSystem.contact[0].name[0] | HL7 UK |
CodeSystem.contact[0].telecom[0].system[0] | |
CodeSystem.contact[0].telecom[0].value[0] | ukcore@hl7.org.uk |
CodeSystem.contact[0].telecom[0].use[0] | work |
CodeSystem.contact[0].telecom[0].rank[0] | 1 |
CodeSystem.description[0] | A CodeSystem to record the categorisation of a specimen. |
CodeSystem.copyright[0] | Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html. |
CodeSystem.caseSensitive[0] | True |
CodeSystem.hierarchyMeaning[0] | is-a |
CodeSystem.content[0] | complete |
CodeSystem.concept[0].code[0] | tumour |
CodeSystem.concept[0].display[0] | Tumour |
CodeSystem.concept[0].concept[0].code[0] | solid-tumour |
CodeSystem.concept[0].concept[0].display[0] | Solid Tumour |
CodeSystem.concept[0].concept[1].code[0] | liquid-tumour |
CodeSystem.concept[0].concept[1].display[0] | Liquid Tumour |
CodeSystem.concept[1].code[0] | germline |
CodeSystem.concept[1].display[0] | Germline |
CodeSystem.concept[2].code[0] | other |
CodeSystem.concept[2].display[0] | Other |
CodeSystem.concept[3].code[0] | not-known |
CodeSystem.concept[3].display[0] | Not Known |
XML View
<CodeSystem xmlns="http://hl7.org/fhir"> <id value="UKCore-SampleCategory" /> <url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory" /> <version value="2.0.0" /> <name value="UKCoreSampleCategory" /> <title value="UK Core Sample Category" /> <status value="active" /> <date value="2024-08-05" /> <publisher value="HL7 UK" /> <contact> <name value="HL7 UK" /> <telecom> <system value="email" /> <value value="ukcore@hl7.org.uk" /> <use value="work" /> <rank value="1" /> </telecom> </contact> <description value="A CodeSystem to record the categorisation of a specimen." /> <copyright value="Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." /> <caseSensitive value="true" /> <hierarchyMeaning value="is-a" /> <content value="complete" /> <concept> <code value="tumour" /> <display value="Tumour" /> <concept> <code value="solid-tumour" /> <display value="Solid Tumour" /> </concept> <concept> <code value="liquid-tumour" /> <display value="Liquid Tumour" /> </concept> </concept> <concept> <code value="germline" /> <display value="Germline" /> </concept> <concept> <code value="other" /> <display value="Other" /> </concept> <concept> <code value="not-known" /> <display value="Not Known" /> </concept> </CodeSystem>
JSON View
{ "resourceType": "CodeSystem", "id": "UKCore-SampleCategory", "url": "https://fhir.hl7.org.uk/CodeSystem/UKCore-SampleCategory", "version": "2.0.0", "name": "UKCoreSampleCategory", "title": "UK Core Sample Category", "status": "active", "date": "2024-08-05", "publisher": "HL7 UK", "contact": [ { "name": "HL7 UK", "telecom": [ { "system": "email", "value": "ukcore@hl7.org.uk", "use": "work", "rank": 1 } ] } ], "description": "A CodeSystem to record the categorisation of a specimen.", "copyright": "Copyright © 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", "caseSensitive": true, "hierarchyMeaning": "is-a", "content": "complete", "concept": [ { "code": "tumour", "display": "Tumour", "concept": [ { "code": "solid-tumour", "display": "Solid Tumour" }, { "code": "liquid-tumour", "display": "Liquid Tumour" } ] }, { "code": "germline", "display": "Germline" }, { "code": "other", "display": "Other" }, { "code": "not-known", "display": "Not Known" } ] }