CodeSystem DGTS Genomic Test Method Type

Usage

CodeSystem used to identify the genomic test methodology used to generate genomic findings or results, as defined within the Digital Genomic Test Service (DGTS).

HTML View

Concepts

This code system https://fhir.nhs.uk/CodeSystem/DGTS-genomictest-method-type defines the following codes:

CodeDisplayDefinition
chromosome-analysisChromosome analysisChromosome analysis, or karyotyping, is a traditional method for detecting large-scale changes in chromosomes, such as missing or extra chromosomes, by visually examining them under a microscope.
microarrayMicroarrayMicroarray analysis is a method that detects copy number variants (CNVs), which are small deletions or duplications of DNA segments. It works by comparing a patient's DNA to a reference sample.
relative-haplotype-dosageRelative Haplotype Dosage (RHDO)Relative Haplotype Dosage (RHDO) is a method primarily used in prenatal testing to non-invasively detect genetic variants in the fetus by analysing DNA from the mother's blood.
sequencingSequencingSequencing is a general term for determining the order of the DNA bases in a specific region, a gene, or a whole genome.
targeted-assaysTargeted assaysTargeted assays, or gene panels, focus on sequencing a specific, pre-selected set of genes known to be associated with a particular condition.
whole-genome-sequencingWhole Genome SequencingWhole genome sequencing is a laboratory process that determines the complete DNA sequence of a patient's genome, providing a comprehensive view of all their genetic material.

Table View

CodeSystem.id[0]DGTS-testmethod-genomics
CodeSystem.url[0]https://fhir.nhs.uk/CodeSystem/DGTS-genomictest-method-type
CodeSystem.version[0]0.1.0
CodeSystem.name[0]DGTSGenomicTestMethodType
CodeSystem.title[0]DGTS Genomic Test Method Type
CodeSystem.status[0]draft
CodeSystem.experimental[0]False
CodeSystem.date[0]2026-06-15T00:00:00+00:00
CodeSystem.publisher[0]NHS England
CodeSystem.contact[0].name[0]NHS England
CodeSystem.contact[0].telecom[0].system[0]email
CodeSystem.contact[0].telecom[0].value[0]interoperabilityteam@nhs.net
CodeSystem.contact[0].telecom[0].use[0]work
CodeSystem.description[0]CodeSystem used to identify the genomic test methodology used to generate genomic findings or results, as defined within the Digital Genomic Test Service (DGTS).
CodeSystem.purpose[0]Defines a standard set of genomic testing methodologies for use within Digital Genomic Test Service (DGTS).
CodeSystem.copyright[0]Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.
CodeSystem.caseSensitive[0]True
CodeSystem.content[0]complete
CodeSystem.count[0]6
CodeSystem.concept[0].code[0]chromosome-analysis
CodeSystem.concept[0].display[0]Chromosome analysis
CodeSystem.concept[0].definition[0]Chromosome analysis, or karyotyping, is a traditional method for detecting large-scale changes in chromosomes, such as missing or extra chromosomes, by visually examining them under a microscope.
CodeSystem.concept[1].code[0]microarray
CodeSystem.concept[1].display[0]Microarray
CodeSystem.concept[1].definition[0]Microarray analysis is a method that detects copy number variants (CNVs), which are small deletions or duplications of DNA segments. It works by comparing a patient's DNA to a reference sample.
CodeSystem.concept[2].code[0]relative-haplotype-dosage
CodeSystem.concept[2].display[0]Relative Haplotype Dosage (RHDO)
CodeSystem.concept[2].definition[0]Relative Haplotype Dosage (RHDO) is a method primarily used in prenatal testing to non-invasively detect genetic variants in the fetus by analysing DNA from the mother's blood.
CodeSystem.concept[3].code[0]sequencing
CodeSystem.concept[3].display[0]Sequencing
CodeSystem.concept[3].definition[0]Sequencing is a general term for determining the order of the DNA bases in a specific region, a gene, or a whole genome.
CodeSystem.concept[4].code[0]targeted-assays
CodeSystem.concept[4].display[0]Targeted assays
CodeSystem.concept[4].definition[0]Targeted assays, or gene panels, focus on sequencing a specific, pre-selected set of genes known to be associated with a particular condition.
CodeSystem.concept[5].code[0]whole-genome-sequencing
CodeSystem.concept[5].display[0]Whole Genome Sequencing
CodeSystem.concept[5].definition[0]Whole genome sequencing is a laboratory process that determines the complete DNA sequence of a patient's genome, providing a comprehensive view of all their genetic material.

XML View

<CodeSystem xmlns="http://hl7.org/fhir">
<id value="DGTS-testmethod-genomics" />
<url value="https://fhir.nhs.uk/CodeSystem/DGTS-genomictest-method-type" />
<version value="0.1.0" />
<name value="DGTSGenomicTestMethodType" />
<title value="DGTS Genomic Test Method Type" />
<status value="draft" />
<experimental value="false" />
<date value="2026-06-15T00:00:00+00:00" />
<publisher value="NHS England" />
<name value="NHS England" />
<system value="email" />
<value value="interoperabilityteam@nhs.net" />
<use value="work" />
</telecom>
</contact>
<description value="CodeSystem used to identify the genomic test methodology used to generate genomic findings or results, as defined within the Digital Genomic Test Service (DGTS)." />
<purpose value="Defines a standard set of genomic testing methodologies for use within Digital Genomic Test Service (DGTS)." />
<copyright value="Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \"License\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \"AS IS\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." />
<caseSensitive value="true" />
<content value="complete" />
<count value="6" />
<code value="chromosome-analysis" />
<display value="Chromosome analysis" />
<definition value="Chromosome analysis, or karyotyping, is a traditional method for detecting large-scale changes in chromosomes, such as missing or extra chromosomes, by visually examining them under a microscope." />
</concept>
<code value="microarray" />
<display value="Microarray" />
<definition value="Microarray analysis is a method that detects copy number variants (CNVs), which are small deletions or duplications of DNA segments. It works by comparing a patient's DNA to a reference sample." />
</concept>
<code value="relative-haplotype-dosage" />
<display value="Relative Haplotype Dosage (RHDO)" />
<definition value="Relative Haplotype Dosage (RHDO) is a method primarily used in prenatal testing to non-invasively detect genetic variants in the fetus by analysing DNA from the mother's blood." />
</concept>
<code value="sequencing" />
<display value="Sequencing" />
<definition value="Sequencing is a general term for determining the order of the DNA bases in a specific region, a gene, or a whole genome." />
</concept>
<code value="targeted-assays" />
<display value="Targeted assays" />
<definition value="Targeted assays, or gene panels, focus on sequencing a specific, pre-selected set of genes known to be associated with a particular condition." />
</concept>
<code value="whole-genome-sequencing" />
<display value="Whole Genome Sequencing" />
<definition value="Whole genome sequencing is a laboratory process that determines the complete DNA sequence of a patient's genome, providing a comprehensive view of all their genetic material." />
</concept>
</CodeSystem>

JSON View

{
"resourceType": "CodeSystem",
"id": "DGTS-testmethod-genomics",
"url": "https://fhir.nhs.uk/CodeSystem/DGTS-genomictest-method-type",
"version": "0.1.0",
"name": "DGTSGenomicTestMethodType",
"title": "DGTS Genomic Test Method Type",
"status": "draft",
"experimental": false,
"date": "2026-06-15T00:00:00+00:00",
"publisher": "NHS England",
"contact": [
{
"name": "NHS England",
"telecom": [
{
"system": "email",
"value": "interoperabilityteam@nhs.net",
"use": "work"
}
]
}
],
"description": "CodeSystem used to identify the genomic test methodology used to generate genomic findings or results, as defined within the Digital Genomic Test Service (DGTS).",
"purpose": "Defines a standard set of genomic testing methodologies for use within Digital Genomic Test Service (DGTS).",
"copyright": "Copyright © 2026+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.",
"caseSensitive": true,
"content": "complete",
"count": 6,
"concept": [
{
"code": "chromosome-analysis",
"display": "Chromosome analysis",
"definition": "Chromosome analysis, or karyotyping, is a traditional method for detecting large-scale changes in chromosomes, such as missing or extra chromosomes, by visually examining them under a microscope."
},
{
"code": "microarray",
"display": "Microarray",
"definition": "Microarray analysis is a method that detects copy number variants (CNVs), which are small deletions or duplications of DNA segments. It works by comparing a patient's DNA to a reference sample."
},
{
"code": "relative-haplotype-dosage",
"display": "Relative Haplotype Dosage (RHDO)",
"definition": "Relative Haplotype Dosage (RHDO) is a method primarily used in prenatal testing to non-invasively detect genetic variants in the fetus by analysing DNA from the mother's blood."
},
{
"code": "sequencing",
"display": "Sequencing",
"definition": "Sequencing is a general term for determining the order of the DNA bases in a specific region, a gene, or a whole genome."
},
{
"code": "targeted-assays",
"display": "Targeted assays",
"definition": "Targeted assays, or gene panels, focus on sequencing a specific, pre-selected set of genes known to be associated with a particular condition."
},
{
"code": "whole-genome-sequencing",
"display": "Whole Genome Sequencing",
"definition": "Whole genome sequencing is a laboratory process that determines the complete DNA sequence of a patient's genome, providing a comprehensive view of all their genetic material."
}
]
}