Genomic-Task-StatusReason

Codes for status reasons within Tasks in genomics

HTML View

This code system https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics defines the following codes:

CodeDisplay
FurtherClinicalDetailsRequiredFurther Clinical Details Required
AwaitingSpecimenAwaiting Specimen
AwaitingRoDAndSpecimenAwaiting Record of Discussion and Specimen
InvalidRequestInvalid Request
PipelineActivityFailurePipeline Activity Failure
TaskTimeExceededTask Time Exceeded
UnableToInterpretUnable To Interpret
SpecimenReceivedSpecimenReceived
SpecimenQualityNotOKSpecimen Quality Not OK
TestNoLongerRequiredTest No Longer Required
MultipleTestRequestedOnTheSamePatientMultiple Test Requested On The Same Patient(only one test required)
DecisionNotToProgressWithTestRequestDecision Not To Progress With Test Request
TestCouldNotBeDeliveredDueToProcessFailuresTest Could Not Be Delivered Due To Process Failures
WrongPatient(Mark-in-Error)Wrong Patient (Mark-in-Error)
SampleAlignedToWrongPatient(Mark-in-Error)Sample Aligned To Wrong Patient (Mark-in-Error)
PatienceChoiceIncorrectlyRecorded(WGS Only)-Mark-in-ErrorPatience Choice Incorrectly Recorded (WGS Only)-Mark-in-Error
CorrectionOfClinicalData(Mark-in-Error)Correction Of Clinical Data (Mark-in-Error)

Table View

CodeSystem.url[0]https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics
CodeSystem.identifier[0].system[0]https://fhir.nhs.uk/identifier/CodeSystem
CodeSystem.identifier[0].value[0]task-statusReason-genomics
CodeSystem.version[0]0.1.0
CodeSystem.name[0]TaskStatusReasonGenomics
CodeSystem.title[0]Task StatusReason Genomics
CodeSystem.status[0]draft
CodeSystem.date[0]2023-12-06
CodeSystem.publisher[0]NHS England
CodeSystem.contact[0].name[0]NHS England
CodeSystem.contact[0].telecom[0].system[0]email
CodeSystem.contact[0].telecom[0].value[0]interoperabilityteam@nhs.net
CodeSystem.contact[0].telecom[0].use[0]work
CodeSystem.description[0]Status reasons for Tasks in genomics
CodeSystem.copyright[0]Copyright © 2023 NHS England
CodeSystem.caseSensitive[0]True
CodeSystem.content[0]complete
CodeSystem.concept[0].code[0]FurtherClinicalDetailsRequired
CodeSystem.concept[0].display[0]Further Clinical Details Required
CodeSystem.concept[1].code[0]AwaitingSpecimen
CodeSystem.concept[1].display[0]Awaiting Specimen
CodeSystem.concept[2].code[0]AwaitingRoDAndSpecimen
CodeSystem.concept[2].display[0]Awaiting Record of Discussion and Specimen
CodeSystem.concept[3].code[0]InvalidRequest
CodeSystem.concept[3].display[0]Invalid Request
CodeSystem.concept[4].code[0]PipelineActivityFailure
CodeSystem.concept[4].display[0]Pipeline Activity Failure
CodeSystem.concept[5].code[0]TaskTimeExceeded
CodeSystem.concept[5].display[0]Task Time Exceeded
CodeSystem.concept[6].code[0]UnableToInterpret
CodeSystem.concept[6].display[0]Unable To Interpret
CodeSystem.concept[7].code[0]SpecimenReceived
CodeSystem.concept[7].display[0]SpecimenReceived
CodeSystem.concept[8].code[0]SpecimenQualityNotOK
CodeSystem.concept[8].display[0]Specimen Quality Not OK
CodeSystem.concept[9].code[0]TestNoLongerRequired
CodeSystem.concept[9].display[0]Test No Longer Required
CodeSystem.concept[10].code[0]MultipleTestRequestedOnTheSamePatient
CodeSystem.concept[10].display[0]Multiple Test Requested On The Same Patient(only one test required)
CodeSystem.concept[11].code[0]DecisionNotToProgressWithTestRequest
CodeSystem.concept[11].display[0]Decision Not To Progress With Test Request
CodeSystem.concept[12].code[0]TestCouldNotBeDeliveredDueToProcessFailures
CodeSystem.concept[12].display[0]Test Could Not Be Delivered Due To Process Failures
CodeSystem.concept[13].code[0]WrongPatient(Mark-in-Error)
CodeSystem.concept[13].display[0]Wrong Patient (Mark-in-Error)
CodeSystem.concept[14].code[0]SampleAlignedToWrongPatient(Mark-in-Error)
CodeSystem.concept[14].display[0]Sample Aligned To Wrong Patient (Mark-in-Error)
CodeSystem.concept[15].code[0]PatienceChoiceIncorrectlyRecorded(WGS Only)-Mark-in-Error
CodeSystem.concept[15].display[0]Patience Choice Incorrectly Recorded (WGS Only)-Mark-in-Error
CodeSystem.concept[16].code[0]CorrectionOfClinicalData(Mark-in-Error)
CodeSystem.concept[16].display[0]Correction Of Clinical Data (Mark-in-Error)

XML View

<CodeSystem xmlns="http://hl7.org/fhir">
    <url value="https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics" />
    <identifier>
        <system value="https://fhir.nhs.uk/identifier/CodeSystem" />
        <value value="task-statusReason-genomics" />
    </identifier>
    <version value="0.1.0" />
    <name value="TaskStatusReasonGenomics" />
    <title value="Task StatusReason Genomics" />
    <status value="draft" />
    <date value="2023-12-06" />
    <publisher value="NHS England" />
    <contact>
        <name value="NHS England" />
        <telecom>
            <system value="email" />
            <value value="interoperabilityteam@nhs.net" />
            <use value="work" />
        </telecom>
    </contact>
    <description value="Status reasons for Tasks in genomics" />
    <copyright value="Copyright &#169; 2023 NHS England" />
    <caseSensitive value="true" />
    <content value="complete" />
    <concept>
        <code value="FurtherClinicalDetailsRequired" />
        <display value="Further Clinical Details Required" />
    </concept>
    <concept>
        <code value="AwaitingSpecimen" />
        <display value="Awaiting Specimen" />
    </concept>
    <concept>
        <code value="AwaitingRoDAndSpecimen" />
        <display value="Awaiting Record of Discussion and Specimen" />
    </concept>
    <concept>
        <code value="InvalidRequest" />
        <display value="Invalid Request" />
    </concept>
    <concept>
        <code value="PipelineActivityFailure" />
        <display value="Pipeline Activity Failure" />
    </concept>
    <concept>
        <code value="TaskTimeExceeded" />
        <display value="Task Time Exceeded" />
    </concept>
    <concept>
        <code value="UnableToInterpret" />
        <display value="Unable To Interpret" />
    </concept>
    <concept>
        <code value="SpecimenReceived" />
        <display value="SpecimenReceived" />
    </concept>
    <concept>
        <code value="SpecimenQualityNotOK" />
        <display value="Specimen Quality Not OK" />
    </concept>
    <concept>
        <code value="TestNoLongerRequired" />
        <display value="Test No Longer Required" />
    </concept>
    <concept>
        <code value="MultipleTestRequestedOnTheSamePatient" />
        <display value="Multiple Test Requested On The Same Patient(only one test required)" />
    </concept>
    <concept>
        <code value="DecisionNotToProgressWithTestRequest" />
        <display value="Decision Not To Progress With Test Request" />
    </concept>
    <concept>
        <code value="TestCouldNotBeDeliveredDueToProcessFailures" />
        <display value="Test Could Not Be Delivered Due To Process Failures" />
    </concept>
    <concept>
        <code value="WrongPatient(Mark-in-Error)" />
        <display value="Wrong Patient (Mark-in-Error)" />
    </concept>
    <concept>
        <code value="SampleAlignedToWrongPatient(Mark-in-Error)" />
        <display value="Sample Aligned To Wrong Patient (Mark-in-Error)" />
    </concept>
    <concept>
        <code value="PatienceChoiceIncorrectlyRecorded(WGS Only)-Mark-in-Error" />
        <display value="Patience Choice Incorrectly Recorded (WGS Only)-Mark-in-Error" />
    </concept>
    <concept>
        <code value="CorrectionOfClinicalData(Mark-in-Error)" />
        <display value="Correction Of Clinical Data (Mark-in-Error)" />
    </concept>
</CodeSystem>

JSON View

{
    "resourceType": "CodeSystem",
    "url": "https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics",
    "identifier":  [
        {
            "system": "https://fhir.nhs.uk/identifier/CodeSystem",
            "value": "task-statusReason-genomics"
        }
    ],
    "version": "0.1.0",
    "name": "TaskStatusReasonGenomics",
    "title": "Task StatusReason Genomics",
    "status": "draft",
    "date": "2023-12-06",
    "publisher": "NHS England",
    "contact":  [
        {
            "name": "NHS England",
            "telecom":  [
                {
                    "system": "email",
                    "value": "interoperabilityteam@nhs.net",
                    "use": "work"
                }
            ]
        }
    ],
    "description": "Status reasons for Tasks in genomics",
    "copyright": "Copyright © 2023 NHS England",
    "caseSensitive": true,
    "content": "complete",
    "concept":  [
        {
            "code": "FurtherClinicalDetailsRequired",
            "display": "Further Clinical Details Required"
        },
        {
            "code": "AwaitingSpecimen",
            "display": "Awaiting Specimen"
        },
        {
            "code": "AwaitingRoDAndSpecimen",
            "display": "Awaiting Record of Discussion and Specimen"
        },
        {
            "code": "InvalidRequest",
            "display": "Invalid Request"
        },
        {
            "code": "PipelineActivityFailure",
            "display": "Pipeline Activity Failure"
        },
        {
            "code": "TaskTimeExceeded",
            "display": "Task Time Exceeded"
        },
        {
            "code": "UnableToInterpret",
            "display": "Unable To Interpret"
        },
        {
            "code": "SpecimenReceived",
            "display": "SpecimenReceived"
        },
        {
            "code": "SpecimenQualityNotOK",
            "display": "Specimen Quality Not OK"
        },
        {
            "code": "TestNoLongerRequired",
            "display": "Test No Longer Required"
        },
        {
            "code": "MultipleTestRequestedOnTheSamePatient",
            "display": "Multiple Test Requested On The Same Patient(only one test required)"
        },
        {
            "code": "DecisionNotToProgressWithTestRequest",
            "display": "Decision Not To Progress With Test Request"
        },
        {
            "code": "TestCouldNotBeDeliveredDueToProcessFailures",
            "display": "Test Could Not Be Delivered Due To Process Failures"
        },
        {
            "code": "WrongPatient(Mark-in-Error)",
            "display": "Wrong Patient (Mark-in-Error)"
        },
        {
            "code": "SampleAlignedToWrongPatient(Mark-in-Error)",
            "display": "Sample Aligned To Wrong Patient (Mark-in-Error)"
        },
        {
            "code": "PatienceChoiceIncorrectlyRecorded(WGS Only)-Mark-in-Error",
            "display": "Patience Choice Incorrectly Recorded (WGS Only)-Mark-in-Error"
        },
        {
            "code": "CorrectionOfClinicalData(Mark-in-Error)",
            "display": "Correction Of Clinical Data (Mark-in-Error)"
        }
    ]
}