FHIR Genomics Implementation Guide

Notice

Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.

Genomic-Patient-Choice-Category

A set of codes use to identify the categories of sources of obtaining the patient consent before undergoing Genomic test.

HTML View

This code system https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics defines the following codes:

Code	Display
AdultOwnChoice	Adult (made their own choice)
AdultLackCapacity	Adult lacking capacity (choices advised by consultee)
Child	Child (parent or guardian choices)
Clinician	Clinician has agreed to the test (in the patient`s best interest)
Deceased	Deceased (choices made on behalf of deceased individual)

Table View

CodeSystem.url[0]	https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics
CodeSystem.identifier[0].system[0]	https://fhir.nhs.uk/identifier/CodeSystem
CodeSystem.identifier[0].value[0]	patient-choice-category-genomics
CodeSystem.version[0]	0.1.0
CodeSystem.name[0]	PatientChoiceCategoryGenomics
CodeSystem.title[0]	Patient Choice Category Genomics
CodeSystem.status[0]	draft
CodeSystem.date[0]	2022-12-21T11:27:52.3231281+00:00
CodeSystem.publisher[0]	NHS Digital
CodeSystem.contact[0].name[0]	NHS Digital
CodeSystem.contact[0].telecom[0].system[0]	email
CodeSystem.contact[0].telecom[0].value[0]	interoperabilityteam@nhs.net
CodeSystem.contact[0].telecom[0].use[0]	work
CodeSystem.description[0]	A set of codes use to identify the categories of sources of obtaining the patient consent before undergoing Genomic test.
CodeSystem.copyright[0]	Copyright © 2022 NHS Digital
CodeSystem.caseSensitive[0]	True
CodeSystem.content[0]	complete
CodeSystem.concept[0].code[0]	AdultOwnChoice
CodeSystem.concept[0].display[0]	Adult (made their own choice)
CodeSystem.concept[1].code[0]	AdultLackCapacity
CodeSystem.concept[1].display[0]	Adult lacking capacity (choices advised by consultee)
CodeSystem.concept[2].code[0]	Child
CodeSystem.concept[2].display[0]	Child (parent or guardian choices)
CodeSystem.concept[3].code[0]	Clinician
CodeSystem.concept[3].display[0]	Clinician has agreed to the test (in the patient`s best interest)
CodeSystem.concept[4].code[0]	Deceased
CodeSystem.concept[4].display[0]	Deceased (choices made on behalf of deceased individual)

XML View

<CodeSystem xmlns="http://hl7.org/fhir">
    <url value="https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics" />
    <identifier>
        <system value="https://fhir.nhs.uk/identifier/CodeSystem" />
        <value value="patient-choice-category-genomics" />
    </identifier>
    <version value="0.1.0" />
    <name value="PatientChoiceCategoryGenomics" />
    <title value="Patient Choice Category Genomics" />
    <status value="draft" />
    <date value="2022-12-21T11:27:52.3231281+00:00" />
    <publisher value="NHS Digital" />
    <contact>
        <name value="NHS Digital" />
        <telecom>
            <system value="email" />
            <value value="interoperabilityteam@nhs.net" />
            <use value="work" />
        </telecom>
    </contact>
    <description value="A set of codes use to identify the categories of sources of obtaining the patient consent before undergoing Genomic test." />
    <copyright value="Copyright &#169; 2022 NHS Digital" />
    <caseSensitive value="true" />
    <content value="complete" />
    <concept>
        <code value="AdultOwnChoice" />
        <display value="Adult (made their own choice)" />
    </concept>
    <concept>
        <code value="AdultLackCapacity" />
        <display value="Adult lacking capacity (choices advised by consultee)" />
    </concept>
    <concept>
        <code value="Child" />
        <display value="Child (parent or guardian choices)" />
    </concept>
    <concept>
        <code value="Clinician" />
        <display value="Clinician has agreed to the test (in the patient`s best interest)" />
    </concept>
    <concept>
        <code value="Deceased" />
        <display value="Deceased (choices made on behalf of deceased individual)" />
    </concept>
</CodeSystem>

JSON View

{
    "resourceType": "CodeSystem",
    "url": "https://fhir.nhs.uk/CodeSystem/patient-choice-category-genomics",
    "identifier":  [
        {
            "system": "https://fhir.nhs.uk/identifier/CodeSystem",
            "value": "patient-choice-category-genomics"
        }
    ],
    "version": "0.1.0",
    "name": "PatientChoiceCategoryGenomics",
    "title": "Patient Choice Category Genomics",
    "status": "draft",
    "date": "2022-12-21T11:27:52.3231281+00:00",
    "publisher": "NHS Digital",
    "contact":  [
        {
            "name": "NHS Digital",
            "telecom":  [
                {
                    "system": "email",
                    "value": "interoperabilityteam@nhs.net",
                    "use": "work"
                }
            ]
        }
    ],
    "description": "A set of codes use to identify the categories of sources of obtaining the patient consent before undergoing Genomic test.",
    "copyright": "Copyright © 2022 NHS Digital",
    "caseSensitive": true,
    "content": "complete",
    "concept":  [
        {
            "code": "AdultOwnChoice",
            "display": "Adult (made their own choice)"
        },
        {
            "code": "AdultLackCapacity",
            "display": "Adult lacking capacity (choices advised by consultee)"
        },
        {
            "code": "Child",
            "display": "Child (parent or guardian choices)"
        },
        {
            "code": "Clinician",
            "display": "Clinician has agreed to the test (in the patient`s best interest)"
        },
        {
            "code": "Deceased",
            "display": "Deceased (choices made on behalf of deceased individual)"
        }
    ]
}