FHIR Genomics Implementation Guide

Notice

Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.

Task-NonWGSRareDiseaseTestOrderHold-Example

Example of a Task placed on hold by a filler organization. NOTE: Task codes and status are pending further business analysis.

Task

id : Task-NonWGSRareDiseaseTestOrderHold-Example

status : on-hold

statusReason

coding

system : https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics

code : TaskTimeExceeded

display : Task Time Exceeded

businessStatus

coding

system : https://fhir.nhs.uk/CodeSystem/business-status-genomics

code : AwaitingSpecimen

display : Awaiting Specimen

intent : order

priority : routine

code

coding

system : https://fhir.nhs.uk/CodeSystem/task-code-genomics

code : RequestSampleAlignment

display : Request & Sample Alignment

focus

reference : ServiceRequest/ServiceRequest-SavedTestOrder-Example

for

reference : Patient/Patient-MeirLieberman-Example

identifier

system : https://fhir.nhs.uk/Id/nhs-number

value : 9449307873

authoredOn : 2023-08-05

lastModified : 2023-08-08

requester

reference : PractitionerRole/PractitionerRole-GeneSmithENT-Example

owner

identifier

system : https://fhir.nhs.uk/Id/ods-organization-code

value : 69010

display : Pathology Lab - ADDENBROOKE'S HOSPITAL LABORATORY

note

text : Please provide additional sample of X

{
    "resourceType": "Task",
    "id": "Task-NonWGSRareDiseaseTestOrderHold-Example",
    "status": "on-hold",
    "statusReason": {
        "coding":  [
            {
                "system": "https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics",
                "code": "TaskTimeExceeded",
                "display": "Task Time Exceeded"
            }
        ]
    },
    "businessStatus": {
        "coding":  [
            {
                "system": "https://fhir.nhs.uk/CodeSystem/business-status-genomics",
                "code": "AwaitingSpecimen",
                "display": "Awaiting Specimen"
            }
        ]
    },
    "intent": "order",
    "priority": "routine",
    "code": {
        "coding":  [
            {
                "system": "https://fhir.nhs.uk/CodeSystem/task-code-genomics",
                "code": "RequestSampleAlignment",
                "display": "Request & Sample Alignment"
            }
        ]
    },
    "focus": {
        "reference": "ServiceRequest/ServiceRequest-SavedTestOrder-Example"
    },
    "for": {
        "reference": "Patient/Patient-MeirLieberman-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307873"
        }
    },
    "authoredOn": "2023-08-05",
    "lastModified": "2023-08-08",
    "requester": {
        "reference": "PractitionerRole/PractitionerRole-GeneSmithENT-Example"
    },
    "owner": {
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/ods-organization-code",
            "value": "69010"
        },
        "display": "Pathology Lab - ADDENBROOKE'S HOSPITAL LABORATORY"
    },
    "note":  [
        {
            "text": "Please provide additional sample of X"
        }
    ]
}

<Task xmlns="http://hl7.org/fhir">
    <id value="Task-NonWGSRareDiseaseTestOrderHold-Example" />
    <status value="on-hold" />
    <statusReason>
        <coding>
            <system value="https://fhir.nhs.uk/CodeSystem/task-statusReason-genomics" />
            <code value="TaskTimeExceeded" />
            <display value="Task Time Exceeded" />
        </coding>
    </statusReason>
    <businessStatus>
        <coding>
            <system value="https://fhir.nhs.uk/CodeSystem/business-status-genomics" />
            <code value="AwaitingSpecimen" />
            <display value="Awaiting Specimen" />
        </coding>
    </businessStatus>
    <intent value="order" />
    <priority value="routine" />
    <code>
        <coding>
            <system value="https://fhir.nhs.uk/CodeSystem/task-code-genomics" />
            <code value="RequestSampleAlignment" />
            <display value="Request &amp; Sample Alignment" />
        </coding>
    </code>
    <focus>
        <reference value="ServiceRequest/ServiceRequest-SavedTestOrder-Example" />
    </focus>
    <for>
        <reference value="Patient/Patient-MeirLieberman-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307873" />
        </identifier>
    </for>
    <authoredOn value="2023-08-05" />
    <lastModified value="2023-08-08" />
    <requester>
        <reference value="PractitionerRole/PractitionerRole-GeneSmithENT-Example" />
    </requester>
    <owner>
        <identifier>
            <system value="https://fhir.nhs.uk/Id/ods-organization-code" />
            <value value="69010" />
        </identifier>
        <display value="Pathology Lab - ADDENBROOKE&#39;S HOSPITAL LABORATORY" />
    </owner>
    <note>
        <text value="Please provide additional sample of X" />
    </note>
</Task>

Notice

Task-NonWGSRareDiseaseTestOrderHold-Example

Propose a change to Task-NonWGSRareDiseaseTestOrderHold-Example