TestBakLOINC
This value set contains codes that describe the analyte or the diagnostic question behind a diagnostic step for the direct and indirect detection of bacterial pathogens.
This value set includes codes from the following code systems:
The following codes from system:
http://loinc.orgCode Display 41852-5 Microorganism or agent identified in Specimen 61360-4 Acinetobacter baumannii DNA [Presence] in Specimen by NAA with probe detection 105628-2 Acinetobacter calcoaceticus-baumannii complex DNA [Presence] in Specimen by NAA with probe detection 90003-5 Acinetobacter sp identified in Specimen by Organism specific culture 11469-4 Bacillus anthracis [Presence] in Specimen by Organism specific culture 22860-1 Bacillus anthracis Ab [Presence] in Serum 22109-3 Bacillus anthracis Ab [Units/volume] in Specimen 11468-6 Bacillus anthracis Ab [Units/volume] in Specimen by Immunofluorescence 31726-3 Bacillus anthracis Ag [Presence] in Specimen 41623-0 Bacillus anthracis DNA [Presence] in Specimen by NAA with probe detection 105636-5 Bacteroides fragilis DNA [Presence] in Specimen by NAA with probe detection 105876-7 Bordetella parapertussis DNA [Presence] in Specimen 69948-8 Bordetella parapertussis IgG Ab [Presence] in Serum by Immunoassay 105875-9 Bordetella pertussis DNA [Presence] in Specimen 23827-9 Bordetella pertussis filamentous hemagglutinin IgA Ab [Units/volume] in Serum 29674-9 Bordetella pertussis IgG Ab [Presence] in Serum 9363-3 Bordetella pertussis IgG Ab [Units/volume] in Serum 23830-3 Bordetella pertussis.pertussis toxin IgA Ab [Units/volume] in Serum 104341-3 Borna disease virus [Presence] in Specimen 49112-6 Borna disease virus Ab [Units/volume] in Serum 104346-2 Borna disease virus Ag [Presence] in Specimen by Immune stain 104342-1 Borna disease virus RNA [Presence] in Specimen by NAA with probe detection 11550-1 Borrelia burgdorferi [Presence] in Specimen by Organism specific culture 16477-2 Borrelia burgdorferi Ab [Presence] in Body fluid 22118-4 Borrelia burgdorferi Ab [Presence] in Cerebral spinal fluid 11006-4 Borrelia burgdorferi Ab [Presence] in Serum 4991-6 Borrelia burgdorferi DNA [Presence] in Specimen by NAA with probe detection 22125-9 Borrelia burgdorferi IgG Ab [Presence] in Cerebral spinal fluid 22128-3 Borrelia burgdorferi IgG Ab [Presence] in Serum 31268-6 Borrelia burgdorferi IgG Ab [Presence] in Specimen 22132-5 Borrelia burgdorferi IgM Ab [Presence] in Cerebral spinal fluid 22135-8 Borrelia burgdorferi IgM Ab [Presence] in Serum 96427-0 Borrelia burgdorferi IgM Ab [Presence] in Specimen 104351-2 Borrelia recurrentis [Presence] in Specimen by Organism specific culture 104356-1 Borrelia recurrentis DNA [Presence] in Specimen by NAA with probe detection 104357-9 Borrelia recurrentis DNA [Presence] in Specimen by Sequencing 22927-8 Brucella abortus DNA [Presence] in Specimen by NAA with probe detection 104359-5 Brucella melitensis DNA [Presence] in Specimen by NAA with non-probe detection 22936-9 Brucella melitensis DNA [Presence] in Specimen by NAA with probe detection 44797-9 Brucella sp [Presence] in Specimen by Organism specific culture 30202-6 Brucella sp Ab [Presence] in Serum 10349-9 Brucella sp Ab [Units/volume] in Serum 41626-3 Brucella sp DNA [Presence] in Specimen by NAA with probe detection 24396-4 Brucella sp IgG Ab [Presence] in Serum 13210-0 Brucella sp IgG Ab [Units/volume] in Serum 24397-2 Brucella sp IgM Ab [Presence] in Serum 5070-8 Brucella sp IgM Ab [Units/volume] in Serum 101552-8 Campylobacter coli DNA [Presence] in Stool by NAA with probe detection 105874-2 Campylobacter coli+jejuni+upsaliensis DNA [Presence] in Stool 61368-7 Campylobacter jejuni DNA [Presence] in Specimen by NAA with probe detection 57768-4 Campylobacter jejuni+Campylobacter coli Ag [Presence] in Stool 97513-6 Campylobacter sp [Presence] in Specimen by Organism specific culture 26619-7 Campylobacter sp Ab [Presence] in Serum 43068-6 Campylobacter sp IgA Ab [Presence] in Serum 101555-1 Campylobacter upsaliensis DNA [Presence] in Stool by NAA with probe detection 45005-6 Chlamydia trachomatis IgA Ab [Presence] in Serum 43848-1 Chlamydia trachomatis IgG Ab [Presence] in Serum 41157-9 Chlamydia trachomatis IgM Ab [Presence] in Serum 105884-1 Chlamydophila pneumoniae DNA [Presence] in Specimen 44981-9 Chlamydophila pneumoniae IgG Ab [Presence] in Serum 24004-4 Chlamydophila pneumoniae IgM Ab [Presence] in Serum 20752-2 Chlamydophila psittaci [Presence] in Specimen by Organism specific culture 23001-1 Chlamydophila psittaci DNA [Presence] in Specimen by NAA with probe detection 43868-9 Chlamydophila psittaci IgG Ab [Presence] in Serum 5080-7 Chlamydophila psittaci IgG Ab [Units/volume] in Serum 44977-7 Chlamydophila psittaci IgM Ab [Presence] in Serum 5081-5 Chlamydophila psittaci IgM Ab [Units/volume] in Serum 34712-0 Clostridioides difficile [Presence] in Stool 87755-5 Clostridioides difficile BI-NAP1-027 strain DNA [Presence] in Stool by NAA with probe detection 57901-1 Clostridioides difficile glutamate dehydrogenase [Presence] in Stool 13957-6 Clostridioides difficile toxin A [Presence] in Stool by Immunoassay 34713-8 Clostridioides difficile toxin A+B [Presence] in Stool 82197-5 Clostridioides difficile toxin A+B tcdA+tcdB genes [Presence] in Stool by NAA with non-probe detection 80685-1 Clostridioides difficile toxin A+B tcdA+tcdB genes [Presence] in Stool by NAA with probe detection 10895-1 Clostridioides difficile toxin B [Presence] in Stool 33694-1 Clostridium botulinum [Presence] in Specimen by Organism specific culture 33708-9 Clostridium botulinum toxin [Presence] in Specimen 104181-3 Clostridium tetani toxin [Presence] in Serum or Plasma by Mouse bioassay 58770-9 Clostridium tetani toxoid IgG Ab [Units/volume] in Serum by Immunofluorescence 43380-5 Coccidioides immitis IgG Ab [Units/volume] in Specimen 16676-9 Corynebacterium diphtheriae [Presence] in Specimen by Organism specific culture 67561-1 Corynebacterium diphtheriae DNA [Presence] in Specimen by NAA with probe detection 24102-6 Corynebacterium toxin [Presence] in Specimen by Immune diffusion (ID) 44799-5 Coxiella burnetii [Presence] in Specimen by Organism specific culture 23024-3 Coxiella burnetii DNA [Presence] in Specimen by NAA with probe detection 31312-2 Coxiella burnetii phase 1 IgA Ab [Units/volume] in Serum 7829-5 Coxiella burnetii phase 1 IgG Ab [Units/volume] in Serum 7831-1 Coxiella burnetii phase 1 IgM Ab [Units/volume] in Serum 31316-3 Coxiella burnetii phase 2 IgA Ab [Units/volume] in Serum 7830-3 Coxiella burnetii phase 2 IgG Ab [Units/volume] in Serum 7832-9 Coxiella burnetii phase 2 IgM Ab [Units/volume] in Serum 5129-2 Deoxyribonuclease Ab [Units/volume] in Serum 104376-9 Diphtheria toxin DNA [Presence] in Specimen by NAA with probe detection 105651-4 Enterobacter cloacae complex DNA [Presence] in Specimen by NAA with probe detection 61362-0 Enterococcus faecalis DNA [Presence] in Specimen by NAA with probe detection 61397-6 Enterococcus faecium DNA [Presence] in Specimen by NAA with probe detection 61398-4 Escherichia coli DNA [Presence] in Specimen by NAA with probe detection 97317-2 Escherichia coli enteroaggregative DNA [Presence] in Stool by NAA with probe detection 101558-5 Escherichia coli enteroinvasive DNA [Presence] in Stool by NAA with probe detection 97318-0 Escherichia coli enteropathogenic DNA [Presence] in Stool by NAA with probe detection 97319-8 Escherichia coli enterotoxigenic DNA [Presence] in Stool by NAA with probe detection 105072-3 Escherichia coli enterotoxigenic ltA+st1a+st1b genes [Presence] in Stool 82182-7 Escherichia coli K1 DNA [Presence] in Cerebral spinal fluid by NAA with non-probe detection 99089-5 Escherichia coli K1 DNA [Presence] in Cerebral spinal fluid by NAA with probe detection 82204-9 Escherichia coli O157 DNA [Presence] in Stool by NAA with non-probe detection 97320-6 Escherichia coli O157 DNA [Presence] in Stool by NAA with probe detection 20789-4 Escherichia coli serotype [Identifier] in Isolate 51940-5 Escherichia coli shiga-like toxin 1 [Presence] in Stool by Immunoassay 82299-9 Escherichia coli shiga-like toxin 1+2 [Presence] in Stool by Immunoassay 51939-7 Escherichia coli shiga-like toxin 2 [Presence] in Stool by Immunoassay 105070-7 Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool 63427-9 Escherichia coli Stx1 toxin stx1 gene [Presence] in Specimen by NAA with probe detection 63428-7 Escherichia coli Stx2 toxin stx2 gene [Presence] in Specimen by NAA with probe detection 33676-8 Francisella tularensis [Presence] in Specimen by Organism specific culture 31396-5 Francisella tularensis Ab [Units/volume] in Serum 31829-5 Francisella tularensis Ag [Presence] in Specimen 33679-2 Francisella tularensis DNA [Presence] in Specimen by NAA with probe detection 31833-7 Haemophilus influenzae A Ag [Presence] in Specimen 29906-5 Haemophilus influenzae A DNA [Presence] in Specimen by NAA with probe detection 61366-1 Haemophilus influenzae DNA [Presence] in Specimen by NAA with probe detection 49721-4 Haemophilus influenzae type [Identifier] in Isolate 22310-7 Helicobacter pylori Ab [Presence] in Serum 7900-4 Helicobacter pylori Ab [Units/volume] in Serum 31843-6 Helicobacter pylori Ag [Presence] in Stool 16126-5 Helicobacter pylori IgG Ab [Presence] in Serum 7902-0 Helicobacter pylori IgG Ab [Units/volume] in Serum 32622-3 Hyaluronidase Ab [Presence] in Serum 61361-2 Klebsiella aerogenes DNA [Presence] in Specimen by NAA with probe detection 105662-1 Klebsiella oxytoca DNA [Presence] in Specimen by NAA with probe detection 61399-2 Klebsiella pneumoniae DNA [Presence] in Specimen by NAA with probe detection 105074-9 Legionella pneumophila 1 Ag [Presence] in Specimen 17057-1 Legionella pneumophila Ag [Presence] in Specimen 21363-7 Legionella pneumophila DNA [Presence] in Specimen by NAA with probe detection 23196-9 Leptospira sp Ab [Presence] in Serum 31483-1 Leptospira sp Ab [Units/volume] in Serum 31872-5 Leptospira sp Ag [Presence] in Urine 35491-0 Leptospira sp DNA [Presence] in Specimen by NAA with probe detection 23200-9 Leptospira sp IgG Ab [Presence] in Serum 23202-5 Leptospira sp IgM Ab [Presence] in Serum 61369-5 Listeria monocytogenes DNA [Presence] in Specimen by NAA with probe detection 105664-7 Listeria sp DNA [Presence] in Specimen by NAA with probe detection 46197-0 Measles virus Ab [Presence] in Serum 7961-6 Measles virus Ab [Units/volume] in Serum 31887-3 Measles virus Ag [Presence] in Specimen 7962-4 Measles virus IgG Ab [Units/volume] in Serum 21503-8 Measles virus IgM Ab [Presence] in Serum 7963-2 Measles virus IgM Ab [Units/volume] in Serum 48508-6 Measles virus RNA [Presence] in Specimen by NAA with probe detection 35492-8 Methicillin resistant Staphylococcus aureus (MRSA) DNA [Presence] in Specimen by NAA with probe detection 94501-4 Middle East respiratory syndrome coronavirus (MERS-CoV) RNA [Presence] in Respiratory system specimen by NAA with probe detection 22415-4 Mumps virus IgG Ab [Presence] in Serum 104433-8 Mycobacterium leprae DNA [Presence] in Specimen by NAA with probe detection 104432-0 Mycobacterium leprae PGL-1 Ab [Titer] in Serum 543-9 Mycobacterium sp identified in Specimen by Organism specific culture 38379-4 Mycobacterium tuberculosis complex DNA [Presence] in Specimen by NAA with probe detection 13956-8 Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection 19054-6 Mycoplasma pneumoniae [Presence] in Specimen by Organism specific culture 29257-3 Mycoplasma pneumoniae DNA [Presence] in Specimen by NAA with probe detection 31515-0 Mycoplasma pneumoniae IgA Ab [Presence] in Serum 46198-8 Mycoplasma pneumoniae IgG Ab [Presence] in Serum 7970-7 Mycoplasma pneumoniae IgG Ab [Units/volume] in Serum 21406-4 Mycoplasma pneumoniae IgM Ab [Presence] in Serum 8078-8 Mycoplasma pneumoniae IgM Ab [Units/volume] in Serum 6483-2 Mycoplasma pneumoniae rRNA [Presence] in Specimen by Probe 23301-5 Mycoplasma sp DNA [Presence] in Specimen by NAA with probe detection 59836-7 Mycoplasma sp+Ureaplasma urealyticum DNA [Presence] in Specimen by NAA with probe detection 16134-9 Neisseria meningitidis [Presence] in Specimen by Organism specific culture 31912-9 Neisseria meningitidis Ag [Presence] in Specimen 49671-1 Neisseria meningitidis DNA [Presence] in Specimen by NAA with probe detection 70172-2 Neisseria meningitidis serogroup [Identifier] in Specimen 74539-8 Neisseria meningitidis serogroup A DNA [Presence] in Specimen by NAA with probe detection 74538-0 Neisseria meningitidis serogroup B DNA [Presence] in Specimen by NAA with probe detection 74537-2 Neisseria meningitidis serogroup C DNA [Presence] in Specimen by NAA with probe detection 74536-4 Neisseria meningitidis serogroup w135 DNA [Presence] in Specimen by NAA with probe detection 74535-6 Neisseria meningitidis serogroup X DNA [Presence] in Specimen by NAA with probe detection 74534-9 Neisseria meningitidis serogroup Y DNA [Presence] in Specimen by NAA with probe detection 55096-2 Nocardia sp identified in Isolate 105057-4 Plesiomonas shigelloides DNA [Presence] in Specimen 105674-6 Proteus sp DNA [Presence] in Specimen by NAA with probe detection 61401-6 Pseudomonas aeruginosa DNA [Presence] in Specimen by NAA with probe detection 7995-4 Rickettsia prowazekii Ab [Units/volume] in Serum 31599-4 Rickettsia prowazekii IgG Ab [Units/volume] in Serum 31600-0 Rickettsia prowazekii IgM Ab [Units/volume] in Serum 7996-2 Rickettsia prowazekii RNA [Presence] in Serum by NAA with probe detection 8000-2 Rickettsia typhus group Ab [Units/volume] in Serum 8001-0 Rickettsia typhus group IgG Ab [Units/volume] in Serum 8002-8 Rickettsia typhus group IgM Ab [Units/volume] in Serum 104449-4 Salmonella paratyphi DNA [Presence] in Blood by NAA with probe detection 11603-8 Salmonella sp Ab [Units/volume] in Serum 101140-2 Salmonella sp Ag [Presence] in Stool by Rapid immunoassay 49612-5 Salmonella sp DNA [Presence] in Specimen by NAA with probe detection 59846-6 Salmonella sp identified [Type] in Isolate 17563-8 Salmonella sp identified in Specimen by Organism specific culture 104450-2 Salmonella typhi DNA [Presence] in Isolate by NAA with probe detection 22529-2 Salmonella typhi H Ab [Presence] in Serum 17566-1 Salmonella typhi O Ab [Presence] in Serum 61402-4 Serratia marcescens DNA [Presence] in Specimen by NAA with probe detection 46454-5 Shigella sp [Presence] in Specimen by Organism specific culture 46455-2 Shigella sp DNA [Presence] in Specimen by NAA with probe detection 61404-0 Staphylococcus aureus DNA [Presence] in Specimen by NAA with probe detection 94424-9 Staphylococcus aureus methicillin resistance SCCmec+orfX junction [Presence] by Molecular method 48816-3 Staphylococcus aureus Panton-Valentine leukocidin gene [Presence] in Isolate or Specimen by Molecular genetics method 61405-7 Staphylococcus epidermidis DNA [Presence] in Specimen by NAA with probe detection 96311-6 Staphylococcus lugdunensis DNA [Presence] by NAA with non-probe detection in Positive blood culture 92775-6 Staphylococcus lugdunensis DNA [Presence] by NAA with probe detection in Positive blood culture 61403-2 Stenotrophomonas maltophilia DNA [Presence] in Specimen by NAA with probe detection 586-8 Streptococcus agalactiae [Presence] in Specimen by Organism specific culture 11266-4 Streptococcus agalactiae Ag [Presence] in Specimen 48683-7 Streptococcus agalactiae DNA [Presence] in Specimen by NAA with probe detection 11086-6 Streptococcus pneumoniae Ag [Presence] in Serum 24027-5 Streptococcus pneumoniae Ag [Presence] in Urine 49672-9 Streptococcus pneumoniae DNA [Presence] in Specimen by NAA with probe detection 17656-0 Streptococcus pyogenes [Presence] in Specimen by Organism specific culture 31971-5 Streptococcus pyogenes Ag [Presence] in Specimen 105062-4 Streptococcus pyogenes DNA [Presence] in Specimen 9788-1 Streptolysin O Ab [Presence] in Serum 22586-2 Treponema pallidum Ab [Presence] in Cerebral spinal fluid 51474-5 Treponema pallidum Ab [Units/volume] in Cerebral spinal fluid 11597-2 Treponema pallidum Ab [Units/volume] in Serum 41122-3 Treponema pallidum Ab [Units/volume] in Specimen 58031-6 Treponema pallidum IgG Ab [Presence] in Cerebral spinal fluid 6561-5 Treponema pallidum IgG Ab [Presence] in Serum 47512-9 Treponema pallidum IgG Ab [Units/volume] in Cerebral spinal fluid 22592-0 Treponema pallidum IgG Ab [Units/volume] in Serum 6562-3 Treponema pallidum IgM Ab [Presence] in Serum 47514-5 Treponema pallidum IgM Ab [Units/volume] in Cerebral spinal fluid 22594-6 Treponema pallidum IgM Ab [Units/volume] in Serum 26658-5 Treponema sp Ab [Presence] in Serum 8043-2 Trichinella spiralis IgG Ab [Presence] in Serum 17734-5 Trichinella spiralis IgG Ab [Units/volume] in Serum 17735-2 Trichinella spiralis IgM Ab [Presence] in Serum 51988-4 Ureaplasma urealyticum DNA [Presence] in Specimen by NAA with probe detection 61371-1 Vibrio cholerae DNA [Presence] in Specimen by NAA with probe detection 53941-1 Vibrio cholerae toxin Ag [Presence] in Isolate 53942-9 Vibrio cholerae toxin ctx gene [Presence] in Specimen by NAA with probe detection 105891-6 Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Specimen 41857-4 Vibrio parahaemolyticus DNA [Presence] in Specimen by NAA with probe detection 49609-1 Vibrio sp DNA [Identifier] in Specimen by NAA with probe detection 6581-3 Vibrio sp identified in Specimen by Organism specific culture 105890-8 Yersinia enterocolitica DNA [Presence] in Specimen 33691-7 Yersinia pestis DNA [Presence] in Specimen by NAA with probe detection 105684-5 Yersinia pseudotuberculosis complex DNA [Presence] in Specimen by NAA with probe detection 17775-8 Yersinia sp IgA Ab [Units/volume] in Serum 17776-6 Yersinia sp IgG Ab [Units/volume] in Serum