NFDI4Health Module Epidemiology of Chronic Diseases Metadataschema

Description

We adapted the Condition resource according to the NFDI4Health requirements within the specific module.


Title Canonical
NFDI4Health PR MDS Condition Chronic Diseases https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-chronic-diseases

References

Reference direction Title Path
is referenced by Composition Composition.section[chronicDiseases].entry
references to NFDI4Health PR MDS Group Actual Condition.subject

idΣ0..1string
metaΣ0..1Meta
implicitRulesΣ ?!0..1uri
language0..1codeBinding
text0..1Narrative
contained0..*Resource
extensionI0..*Extension
modifierExtension?! I0..*Extension
identifierΣ0..*Identifier
clinicalStatusΣ ?! I0..1CodeableConceptBinding
verificationStatusΣ ?! I0..1CodeableConceptBinding
dataCollected1..1CodeableConceptBinding
informationSources1..*CodeableConceptBinding
severity0..1CodeableConceptBinding
codeΣ1..1CodeableConceptBinding
bodySiteΣ0..*CodeableConcept
subjectΣ I1..1Reference(NFDI4Health PR MDS Group Actual)
encounterΣ I0..1Reference(Encounter)
onsetDateTimedateTime
onsetAgeAge
onsetPeriodPeriod
onsetRangeRange
onsetStringstring
abatementDateTimedateTime
abatementAgeAge
abatementPeriodPeriod
abatementRangeRange
abatementStringstring
recordedDateΣ0..1dateTime
recorderΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
asserterΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
summaryI0..1CodeableConcept
assessmentI0..*Reference(ClinicalImpression | DiagnosticReport | Observation)
type0..1CodeableConcept
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
codeΣ I0..*CodeableConcept
detailΣ I0..*Reference(Resource)
note0..*Annotation
idΣ0..1string
metaΣ0..1Meta
implicitRulesΣ ?!0..1uri
language0..1codeBinding
text0..1Narrative
contained0..*Resource
extensionI0..*Extension
modifierExtension?! I0..*Extension
identifierΣ0..*Identifier
clinicalStatusΣ ?! I0..1CodeableConceptBinding
verificationStatusΣ ?! I0..1CodeableConceptBinding
dataCollected1..1CodeableConceptBinding
informationSources1..*CodeableConceptBinding
severity0..1CodeableConceptBinding
codeΣ1..1CodeableConceptBinding
bodySiteΣ0..*CodeableConcept
subjectΣ I1..1Reference(NFDI4Health PR MDS Group Actual)
encounterΣ I0..1Reference(Encounter)
onsetDateTimedateTime
onsetAgeAge
onsetPeriodPeriod
onsetRangeRange
onsetStringstring
abatementDateTimedateTime
abatementAgeAge
abatementPeriodPeriod
abatementRangeRange
abatementStringstring
recordedDateΣ0..1dateTime
recorderΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
asserterΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
summaryI0..1CodeableConcept
assessmentI0..*Reference(ClinicalImpression | DiagnosticReport | Observation)
type0..1CodeableConcept
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
codeΣ I0..*CodeableConcept
detailΣ I0..*Reference(Resource)
note0..*Annotation
idΣ0..1string
metaΣ0..1Meta
implicitRulesΣ ?!0..1uri
language0..1codeBinding
text0..1Narrative
contained0..*Resource
extensionI0..*Extension
modifierExtension?! I0..*Extension
identifierΣ0..*Identifier
clinicalStatusΣ ?! I0..1CodeableConceptBinding
verificationStatusΣ ?! I0..1CodeableConceptBinding
dataCollected1..1CodeableConceptBinding
informationSources1..*CodeableConceptBinding
severity0..1CodeableConceptBinding
codeΣ1..1CodeableConceptBinding
bodySiteΣ0..*CodeableConcept
subjectΣ I1..1Reference(NFDI4Health PR MDS Group Actual)
encounterΣ I0..1Reference(Encounter)
onsetDateTimedateTime
onsetAgeAge
onsetPeriodPeriod
onsetRangeRange
onsetStringstring
abatementDateTimedateTime
abatementAgeAge
abatementPeriodPeriod
abatementRangeRange
abatementStringstring
recordedDateΣ0..1dateTime
recorderΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
asserterΣ I0..1Reference(Practitioner | PractitionerRole | Patient | RelatedPerson)
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
summaryI0..1CodeableConcept
assessmentI0..*Reference(ClinicalImpression | DiagnosticReport | Observation)
type0..1CodeableConcept
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
codeΣ I0..*CodeableConcept
detailΣ I0..*Reference(Resource)
note0..*Annotation
{
    "resourceType": "StructureDefinition",
    "id": "nfdi4health-pr-mds-chronic-diseases",
    "url": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-chronic-diseases",
    "version": "0.9",
    "name": "NFDI4Health_PR_MDS_Chronic_Diseases",
    "title": "NFDI4Health PR MDS Centers",
    "status": "draft",
    "publisher": "NFDI4Health",
    "contact":  [
        {
            "telecom":  [
                {
                    "system": "url",
                    "value": "https://www.nfdi4health.de"
                }
            ]
        }
    ],
    "description": "Profile intended to capture information on chronic disease data collected in the [RESOURCE].",
    "fhirVersion": "4.0.1",
    "mapping":  [
        {
            "identity": "workflow",
            "uri": "http://hl7.org/fhir/workflow",
            "name": "Workflow Pattern"
        },
        {
            "identity": "sct-concept",
            "uri": "http://snomed.info/conceptdomain",
            "name": "SNOMED CT Concept Domain Binding"
        },
        {
            "identity": "v2",
            "uri": "http://hl7.org/v2",
            "name": "HL7 v2 Mapping"
        },
        {
            "identity": "rim",
            "uri": "http://hl7.org/v3",
            "name": "RIM Mapping"
        },
        {
            "identity": "w5",
            "uri": "http://hl7.org/fhir/fivews",
            "name": "FiveWs Pattern Mapping"
        },
        {
            "identity": "sct-attr",
            "uri": "http://snomed.org/attributebinding",
            "name": "SNOMED CT Attribute Binding"
        },
        {
            "identity": "NFDI4Health",
            "name": "NFDI4Health to FHIR Mapping"
        }
    ],
    "kind": "resource",
    "abstract": false,
    "type": "Condition",
    "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Condition",
    "derivation": "constraint",
    "differential": {
        "element":  [
            {
                "id": "Condition.category",
                "path": "Condition.category",
                "slicing": {
                    "discriminator":  [
                        {
                            "type": "value",
                            "path": "code"
                        }
                    ],
                    "rules": "open"
                },
                "min": 2
            },
            {
                "id": "Condition.category:dataCollected",
                "path": "Condition.category",
                "sliceName": "dataCollected",
                "short": "Type of data collected",
                "definition": "Specification of the type of data collected.",
                "min": 1,
                "max": "1",
                "binding": {
                    "strength": "required",
                    "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-cd-datacollected-nci"
                },
                "mapping":  [
                    {
                        "identity": "NFDI4Health",
                        "map": "dataCollected"
                    }
                ]
            },
            {
                "id": "Condition.category:informationSources",
                "path": "Condition.category",
                "sliceName": "informationSources",
                "short": "From which source(s) are data generated/extracted?",
                "definition": "Specification of the source(s) from which information is generated/extracted.",
                "min": 1,
                "max": "*",
                "binding": {
                    "strength": "required",
                    "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-cd-information-sources-nci-local"
                },
                "mapping":  [
                    {
                        "identity": "NFDI4Health",
                        "map": "ChronicDiseasesEpidemiology.informationSources"
                    }
                ]
            },
            {
                "id": "Condition.code",
                "path": "Condition.code",
                "short": "On which of the following common chronic diseases were data collected?",
                "definition": "Specification of the common chronic disease on which data were collected in the [RESOURCE].",
                "min": 1,
                "binding": {
                    "strength": "required",
                    "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-cd-common-chronic-disease-name-sct-local"
                },
                "mapping":  [
                    {
                        "identity": "NFDI4Health",
                        "map": "ChronicDiseasesEpidemiology.commonChronicDiseaseName"
                    }
                ]
            },
            {
                "id": "Condition.subject",
                "path": "Condition.subject",
                "type":  [
                    {
                        "code": "Reference",
                        "targetProfile":  [
                            "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-group-actual"
                        ]
                    }
                ]
            },
            {
                "id": "Condition.note",
                "path": "Condition.note",
                "short": "How were outcomes generally verified?",
                "definition": "Methods of verification differ by study. All the details per outcome are not needed here but rather an explanation of how outcomes were verified in general.",
                "mapping":  [
                    {
                        "identity": "NFDI4Health",
                        "map": "ChronicDiseasesEpidemiology.outcomesVerificationMethods"
                    }
                ]
            }
        ]
    }
}