NHS England FHIR Implementation Guide (deprecated)

covid-19-detection-of-virus

Url
https://fhir.nhs.uk/ValueSet/covid-19-detection-of-virus

Based on Primary Care EPR Result Processing from COVID_19_Related_Pathology_Messaging_Guidance v2.5.9.

This ValueSet is for review and information only and not intended for implementation use. When implementing, systems should use the latest der2_sRefset_SimpleMapUKCRSnapshot_GB1000000 file from the UK SNOMED CT Release, found in the clinical refsets extension, as the definitive ‘source of truth’ for all mapping functions.

ValueSet 'COVID19DetectionOfVirus'

Version	2.5.9
Published by	NHS Digital
Status	Draft (since 2020-11-13T06:00:00+00:00)

SNOMED CT-coded requestable tests is to be used

Contact Information

Interoperability Team

Email: interoperabilityteam@nhs.net

This value set includes codes from the following code systems:

The following codes from system: SNOMED_CT

Code	Display
1240581000000104	SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result positive
1240591000000102	SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result negative
1321681000000104	SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result equivocal
1324601000000106	SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive
1324881000000100	SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive at the limit of detection
1324581000000102	SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result negative
1321691000000102	SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result unknown

{
    "resourceType": "ValueSet",
    "id": "covid-19-detection-of-virus",
    "url": "https://fhir.nhs.uk/ValueSet/covid-19-detection-of-virus",
    "version": "2.5.9",
    "name": "COVID19DetectionOfVirus",
    "title": "COVID-19 SNOMED CT Detection of Virus",
    "status": "draft",
    "date": "2020-11-13T06:00:00+00:00",
    "publisher": "NHS Digital",
    "contact":  [
        {
            "name": "Interoperability Team",
            "telecom":  [
                {
                    "system": "email",
                    "value": "interoperabilityteam@nhs.net",
                    "use": "work"
                }
            ]
        }
    ],
    "description": "SNOMED CT-coded requestable tests is to be used",
    "compose": {
        "include":  [
            {
                "system": "http://snomed.info/sct",
                "concept":  [
                    {
                        "code": "1240581000000104",
                        "display": "SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result positive"
                    },
                    {
                        "code": "1240591000000102",
                        "display": "SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result negative"
                    },
                    {
                        "code": "1321681000000104",
                        "display": "SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result equivocal"
                    },
                    {
                        "code": "1324601000000106",
                        "display": "SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive"
                    },
                    {
                        "code": "1324881000000100",
                        "display": "SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive at the limit of detection"
                    },
                    {
                        "code": "1324581000000102",
                        "display": "SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result negative"
                    },
                    {
                        "code": "1321691000000102",
                        "display": "SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result unknown"
                    }
                ]
            }
        ]
    }
}

<ValueSet xmlns="http://hl7.org/fhir">
    <id value="covid-19-detection-of-virus" />
    <url value="https://fhir.nhs.uk/ValueSet/covid-19-detection-of-virus" />
    <version value="2.5.9" />
    <name value="COVID19DetectionOfVirus" />
    <title value="COVID-19 SNOMED CT Detection of Virus" />
    <status value="draft" />
    <date value="2020-11-13T06:00:00+00:00" />
    <publisher value="NHS Digital" />
    <contact>
        <name value="Interoperability Team" />
        <telecom>
            <system value="email" />
            <value value="interoperabilityteam@nhs.net" />
            <use value="work" />
        </telecom>
    </contact>
    <description value="SNOMED CT-coded requestable tests is to be used" />
    <compose>
        <include>
            <system value="http://snomed.info/sct" />
            <concept>
                <code value="1240581000000104" />
                <display value="SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result positive" />
            </concept>
            <concept>
                <code value="1240591000000102" />
                <display value="SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result negative" />
            </concept>
            <concept>
                <code value="1321681000000104" />
                <display value="SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detection result equivocal" />
            </concept>
            <concept>
                <code value="1324601000000106" />
                <display value="SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive" />
            </concept>
            <concept>
                <code value="1324881000000100" />
                <display value="SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result positive at the limit of detection" />
            </concept>
            <concept>
                <code value="1324581000000102" />
                <display value="SSARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result negative" />
            </concept>
            <concept>
                <code value="1321691000000102" />
                <display value="SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) RNA (ribonucleic acid) detection result unknown" />
            </concept>
        </include>
    </compose>
</ValueSet>