Specimen

Specimen-BloodEDTA-Example

Example of a placeholder Specimen resource that is awaiting collection.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-BloodEDTA-Example",
    "identifier":  [
        {
            "system": "https://fhir.add.nhs.uk/Id/specimenId",
            "value": "RGT03135"
        }
    ],
    "status": "unavailable",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-MeirLieberman-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307873"
        }
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-BloodEDTA-Example" />
    <identifier>
        <system value="https://fhir.add.nhs.uk/Id/specimenId" />
        <value value="RGT03135" />
    </identifier>
    <status value="unavailable" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-MeirLieberman-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307873" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-Example" />
    </request>
</Specimen>


Specimen-BloodEDTA-WithCollectionDetails-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-BloodEDTA-WithCollectionDetails-Example",
    "identifier":  [
        {
            "system": "https://fhir.leedsth.nhs.uk/Id/specimenId",
            "value": "RR8-696B0-17843"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-FayMutlow-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307806"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "Phletobomist-Lois Lane"
        },
        "collectedDateTime": "2023-10-05T15:30:00Z"
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-SavedTestOrderUpdated-CascadeTesting-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-BloodEDTA-WithCollectionDetails-Example" />
    <identifier>
        <system value="https://fhir.leedsth.nhs.uk/Id/specimenId" />
        <value value="RR8-696B0-17843" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-FayMutlow-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307806" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-SavedTestOrderUpdated-CascadeTesting-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="Phletobomist-Lois Lane" />
        </collector>
        <collectedDateTime value="2023-10-05T15:30:00Z" />
    </collection>
</Specimen>


Specimen-BoneMarrowAspiration-Example

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-BoneMarrowAspiration-Example",
    "identifier":  [
        {
            "system": "urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24",
            "value": "RR81234",
            "assigner": {
                "identifier": {
                    "system": "https://fhir.nhs.uk/Id/ods-organization-code",
                    "value": "696B0"
                }
            }
        }
    ],
    "accessionIdentifier": {
        "system": "https://www.leedsth.nhs.uk/path",
        "value": "RR8123745",
        "assigner": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/ods-organization-code",
                "value": "RR8"
            }
        }
    },
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "396997002",
                "display": "Specimen from bone marrow obtained by aspiration"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-PatrickSammy-Example"
    },
    "receivedTime": "2023-08-29T11:00:00Z",
    "request":  [
        {
            "reference": "ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-BoneMarrowAspiration-Example" />
    <identifier>
        <system value="urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24" />
        <value value="RR81234" />
        <assigner>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/ods-organization-code" />
                <value value="696B0" />
            </identifier>
        </assigner>
    </identifier>
    <accessionIdentifier>
        <system value="https://www.leedsth.nhs.uk/path" />
        <value value="RR8123745" />
        <assigner>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/ods-organization-code" />
                <value value="RR8" />
            </identifier>
        </assigner>
    </accessionIdentifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="396997002" />
            <display value="Specimen from bone marrow obtained by aspiration" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-PatrickSammy-Example" />
    </subject>
    <receivedTime value="2023-08-29T11:00:00Z" />
    <request>
        <reference value="ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example" />
    </request>
</Specimen>


Specimen-JamesMetcalfeBloodEDTA-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-JamesMetcalfeBloodEDTA-Example",
    "identifier":  [
        {
            "system": "https://fhir.medway.nhs.uk/Id/specimenId",
            "value": "RH-696B0-17843"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-JamesMetcalfe-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307806"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "Phletobomist-Lois Lane"
        },
        "collectedDateTime": "2023-10-02T10:00:00Z"
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-DirectToLab-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-JamesMetcalfeBloodEDTA-Example" />
    <identifier>
        <system value="https://fhir.medway.nhs.uk/Id/specimenId" />
        <value value="RH-696B0-17843" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-JamesMetcalfe-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307806" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-WGSTestOrderFormUpdated-DirectToLab-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="Phletobomist-Lois Lane" />
        </collector>
        <collectedDateTime value="2023-10-02T10:00:00Z" />
    </collection>
</Specimen>


Specimen-PheobeSmitham-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-PheobeSmitham-Example",
    "identifier":  [
        {
            "system": "https://fhir.leedssth.nhs.uk//Id/specimenId",
            "value": "RGD-69050-P-RR12764"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-PheobeSmitham-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307539"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "Phletobomist-Lois Lane"
        },
        "collectedDateTime": "2023-09-17"
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-PheobeSmitham-Example" />
    <identifier>
        <system value="https://fhir.leedssth.nhs.uk//Id/specimenId" />
        <value value="RGD-69050-P-RR12764" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-PheobeSmitham-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307539" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="Phletobomist-Lois Lane" />
        </collector>
        <collectedDateTime value="2023-09-17" />
    </collection>
</Specimen>


Specimen-PheobeSmithamFather-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-PheobeSmithamFather-Example",
    "identifier":  [
        {
            "system": "https://fhir.leedssth.nhs.uk//Id/specimenId",
            "value": "RGD-69050-FTH-RR12764"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-PheobeSmithamFather-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307636"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "Phletobomist-Lois Lane"
        },
        "collectedDateTime": "2023-09-17"
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-PheobeSmithamFather-Example" />
    <identifier>
        <system value="https://fhir.leedssth.nhs.uk//Id/specimenId" />
        <value value="RGD-69050-FTH-RR12764" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-PheobeSmithamFather-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307636" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="Phletobomist-Lois Lane" />
        </collector>
        <collectedDateTime value="2023-09-17" />
    </collection>
</Specimen>


Specimen-PheobeSmithamMother-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-PheobeSmithamMother-Example",
    "identifier":  [
        {
            "system": "https://fhir.leedssth.nhs.uk//Id/specimenId",
            "value": "ROA-69050-MTH-RR12764"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "445295009",
                "display": "Blood specimen with EDTA"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-PheobeSmithamMother-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307246"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "Phletobomist-Lois Lane"
        },
        "collectedDateTime": "2023-09-17"
    },
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-PheobeSmithamMother-Example" />
    <identifier>
        <system value="https://fhir.leedssth.nhs.uk//Id/specimenId" />
        <value value="ROA-69050-MTH-RR12764" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="445295009" />
            <display value="Blood specimen with EDTA" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-PheobeSmithamMother-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307246" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-WGSTestOrderForm-TrioTestingProband-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="Phletobomist-Lois Lane" />
        </collector>
        <collectedDateTime value="2023-09-17" />
    </collection>
</Specimen>


Specimen-RyanneBoulderPartnerSaliva-Example

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-RyanneBoulderPartnerSaliva-Example",
    "identifier":  [
        {
            "system": "https://fhir.kingstonhospital.nhs.uk//Id/specimenId",
            "value": "ROA-69050-FTH-RWT13521"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "119342007",
                "display": "Saliva specimen"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-RyanneBoulderPartner-Example"
    },
    "container":  [
        {
            "description": "Container:ROA-69050-FTH-RWT13521 contains Saliva for Father"
        }
    ],
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-RyanneBoulderPartnerSaliva-Example" />
    <identifier>
        <system value="https://fhir.kingstonhospital.nhs.uk//Id/specimenId" />
        <value value="ROA-69050-FTH-RWT13521" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="119342007" />
            <display value="Saliva specimen" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-RyanneBoulderPartner-Example" />
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example" />
    </request>
    <container>
        <description value="Container:ROA-69050-FTH-RWT13521 contains Saliva for Father" />
    </container>
</Specimen>


Specimen-RyanneBoulderSaliva-Example

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-RyanneBoulderSaliva-Example",
    "identifier":  [
        {
            "system": "https://fhir.kingstonhospital.nhs.uk//Id/specimenId",
            "value": "ROA-69050-MTH-RWT13521"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "119342007",
                "display": "Saliva specimen"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-RyanneBoulder-Example"
    },
    "container":  [
        {
            "description": "Container:ROA-69050-MTH-RWT13521 contains Saliva for Mother"
        }
    ],
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-RyanneBoulderSaliva-Example" />
    <identifier>
        <system value="https://fhir.kingstonhospital.nhs.uk//Id/specimenId" />
        <value value="ROA-69050-MTH-RWT13521" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="119342007" />
            <display value="Saliva specimen" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-RyanneBoulder-Example" />
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example" />
    </request>
    <container>
        <description value="Container:ROA-69050-MTH-RWT13521 contains Saliva for Mother" />
    </container>
</Specimen>


Specimen-CancerSolidTumor-Example

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-CancerSolidTumor-Example",
    "identifier":  [
        {
            "system": "https://fhir.add.nhs.uk/Id/specimenId",
            "value": "RA257630"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "364611000000101",
                "display": "Tissue resection sample"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-ZelmaHadjkiss-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9449307555"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "ClinicalScientist-John Taylor"
        },
        "collectedDateTime": "2023-09-09T11:00:00Z",
        "bodySite": {
            "extension":  [
                {
                    "url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BodySiteReference",
                    "valueReference": {
                        "reference": "BodyStructure/BodyStructure-BodySiteLocationLungs-Example"
                    }
                }
            ]
        }
    },
    "condition":  [
        {
            "coding":  [
                {
                    "system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState",
                    "code": "fresh-unfixed",
                    "display": "Fresh Unfixed"
                }
            ]
        }
    ],
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-CancerSolidTumor-Example" />
    <identifier>
        <system value="https://fhir.add.nhs.uk/Id/specimenId" />
        <value value="RA257630" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="364611000000101" />
            <display value="Tissue resection sample" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-ZelmaHadjkiss-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9449307555" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-CancerSolidTumor-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="ClinicalScientist-John Taylor" />
        </collector>
        <collectedDateTime value="2023-09-09T11:00:00Z" />
        <bodySite>
            <extension url="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BodySiteReference">
                <valueReference>
                    <reference value="BodyStructure/BodyStructure-BodySiteLocationLungs-Example" />
                </valueReference>
            </extension>
        </bodySite>
    </collection>
    <condition>
        <coding>
            <system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState" />
            <code value="fresh-unfixed" />
            <display value="Fresh Unfixed" />
        </coding>
    </condition>
</Specimen>


Specimen-TissueResection-Example

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-TissueResection-Example",
    "identifier":  [
        {
            "system": "https://fhir.add.nhs.uk/Id/specimenId",
            "value": "699F01231423"
        }
    ],
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "364611000000101",
                "display": "Tissue resection sample"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-KayBurbridge-Example",
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "8449303541"
        }
    },
    "collection": {
        "collector": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/sds-user-id",
                "value": "9999999998"
            },
            "display": "ClinicalScientist-Anna Lane"
        },
        "collectedDateTime": "2023-11-04T15:00:00Z",
        "bodySite": {
            "extension":  [
                {
                    "url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BodySiteReference",
                    "valueReference": {
                        "reference": "BodyStructure/BodyStructure-SpecimenBodySiteLocation-Example"
                    }
                }
            ]
        }
    },
    "condition":  [
        {
            "coding":  [
                {
                    "system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState",
                    "code": "fresh-unfixed",
                    "display": "Fresh Unfixed"
                }
            ]
        }
    ],
    "request":  [
        {
            "reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-OutOfCountry-Example"
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-TissueResection-Example" />
    <identifier>
        <system value="https://fhir.add.nhs.uk/Id/specimenId" />
        <value value="699F01231423" />
    </identifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="364611000000101" />
            <display value="Tissue resection sample" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-KayBurbridge-Example" />
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="8449303541" />
        </identifier>
    </subject>
    <request>
        <reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-OutOfCountry-Example" />
    </request>
    <collection>
        <collector>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/sds-user-id" />
                <value value="9999999998" />
            </identifier>
            <display value="ClinicalScientist-Anna Lane" />
        </collector>
        <collectedDateTime value="2023-11-04T15:00:00Z" />
        <bodySite>
            <extension url="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BodySiteReference">
                <valueReference>
                    <reference value="BodyStructure/BodyStructure-SpecimenBodySiteLocation-Example" />
                </valueReference>
            </extension>
        </bodySite>
    </collection>
    <condition>
        <coding>
            <system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-BiopsyState" />
            <code value="fresh-unfixed" />
            <display value="Fresh Unfixed" />
        </coding>
    </condition>
</Specimen>


Specimen-MichealJonesBlood-Minimal

Example of a Specimen resource with the minimal information populated.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-MichaelJonesBlood-Example",
    "accessionIdentifier": {
        "system": "https://www.christie.nhs.uk/path",
        "value": "Spec123456"
    },
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "87612001",
                "display": "Blood (substance)"
            }
        ]
    },
    "subject": {
        "identifier": {
            "system": "https://fhir.nhs.uk/Id/nhs-number",
            "value": "9999999999"
        }
    },
    "request":  [
        {
            "identifier": {
                "system": "https://www.christie.nhs.uk/ehr",
                "value": "LabOrder123456"
            }
        }
    ],
    "collection": {
        "collectedDateTime": "2022-07-11T09:00:00Z",
        "quantity": {
            "system": "http://unitsofmeasure.org",
            "code": "mL",
            "value": 2.5
        }
    }
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-MichaelJonesBlood-Example" />
    <accessionIdentifier>
        <system value="https://www.christie.nhs.uk/path" />
        <value value="Spec123456" />
    </accessionIdentifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="87612001" />
            <display value="Blood (substance)" />
        </coding>
    </type>
    <subject>
        <identifier>
            <system value="https://fhir.nhs.uk/Id/nhs-number" />
            <value value="9999999999" />
        </identifier>
    </subject>
    <request>
        <identifier>
            <system value="https://www.christie.nhs.uk/ehr" />
            <value value="LabOrder123456" />
        </identifier>
    </request>
    <collection>
        <collectedDateTime value="2022-07-11T09:00:00Z" />
        <quantity>
            <value value="2.5" />
            <system value="http://unitsofmeasure.org" />
            <code value="mL" />
        </quantity>
    </collection>
</Specimen>


Specimen-MichaelJonesBloodWithCollectionDetails-Example

Example of a specimen resource with additional collection information.

Specimen
{
    "resourceType": "Specimen",
    "id": "Specimen-MichaelJonesBloodWithCollectionDetails-Example",
    "identifier":  [
        {
            "system": "https://www.christie.nhs.uk/path",
            "value": "Spec123456"
        }
    ],
    "accessionIdentifier": {
        "system": "https://www.christie.nhs.uk/path",
        "value": "Spec123456"
    },
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "87612001",
                "display": "Blood (substance)"
            }
        ]
    },
    "subject": {
        "reference": "Patient?identifier=https://fhir.nhs.uk/Id/nhs-number|9999999999"
    },
    "receivedTime": "2022-07-13T09:00:00Z",
    "request":  [
        {
            "reference": "ServiceRequest?identifier=https://www.christie.nhs.uk/ehr|LabOrder123456"
        }
    ],
    "collection": {
        "collector": {
            "reference": "Practitioner?identifier=https://fhir.nhs.uk/Id/sds-user-id|999999"
        },
        "collectedDateTime": "2022-07-11T09:00:00Z",
        "quantity": {
            "system": "http://unitsofmeasure.org",
            "code": "mL",
            "value": 2.5
        },
        "method": {
            "coding":  [
                {
                    "system": "http://snomed.info/sct",
                    "code": "129300006",
                    "display": "Puncture - action"
                }
            ]
        },
        "bodySite": {
            "coding":  [
                {
                    "system": "http://snomed.info/sct",
                    "code": "14975008",
                    "display": "Forearm structure (body structure)"
                }
            ]
        }
    },
    "container":  [
        {
            "identifier":  [
                {
                    "use": "official",
                    "type": {
                        "coding":  [
                            {
                                "system": "http://terminology.hl7.org/CodeSystem/v2-0203",
                                "code": "ACSN",
                                "display": "Accession ID"
                            }
                        ]
                    },
                    "system": "https://www.christie.nhs.uk/path",
                    "value": "ASCN123456",
                    "assigner": {
                        "reference": "Organization?identifier=https://fhir.nhs.uk/Id/ods-organization-code|RBV"
                    }
                }
            ],
            "type": {
                "coding":  [
                    {
                        "system": "http://snomed.info/sct",
                        "code": "706067003",
                        "display": "Blood collection/transfer device (physical object)"
                    }
                ]
            },
            "specimenQuantity": {
                "system": "http://unitsofmeasure.org",
                "code": "mL",
                "value": 2.5
            }
        }
    ],
    "condition":  [
        {
            "coding":  [
                {
                    "system": "http://terminology.hl7.org/CodeSystem/v2-0493",
                    "code": "SNR",
                    "display": "Sample not received"
                }
            ]
        }
    ]
}
<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-MichaelJonesBloodWithCollectionDetails-Example" />
    <identifier>
        <system value="https://www.christie.nhs.uk/path" />
        <value value="Spec123456" />
    </identifier>
    <accessionIdentifier>
        <system value="https://www.christie.nhs.uk/path" />
        <value value="Spec123456" />
    </accessionIdentifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="87612001" />
            <display value="Blood (substance)" />
        </coding>
    </type>
    <subject>
        <reference value="Patient?identifier=https://fhir.nhs.uk/Id/nhs-number|9999999999" />
    </subject>
    <receivedTime value="2022-07-13T09:00:00Z" />
    <request>
        <reference value="ServiceRequest?identifier=https://www.christie.nhs.uk/ehr|LabOrder123456" />
    </request>
    <collection>
        <collector>
            <reference value="Practitioner?identifier=https://fhir.nhs.uk/Id/sds-user-id|999999" />
        </collector>
        <collectedDateTime value="2022-07-11T09:00:00Z" />
        <quantity>
            <value value="2.5" />
            <system value="http://unitsofmeasure.org" />
            <code value="mL" />
        </quantity>
        <method>
            <coding>
                <system value="http://snomed.info/sct" />
                <code value="129300006" />
                <display value="Puncture - action" />
            </coding>
        </method>
        <bodySite>
            <coding>
                <system value="http://snomed.info/sct" />
                <code value="14975008" />
                <display value="Forearm structure (body structure)" />
            </coding>
        </bodySite>
    </collection>
    <container>
        <identifier>
            <use value="official" />
            <type>
                <coding>
                    <system value="http://terminology.hl7.org/CodeSystem/v2-0203" />
                    <code value="ACSN" />
                    <display value="Accession ID" />
                </coding>
            </type>
            <system value="https://www.christie.nhs.uk/path" />
            <value value="ASCN123456" />
            <assigner>
                <reference value="Organization?identifier=https://fhir.nhs.uk/Id/ods-organization-code|RBV" />
            </assigner>
        </identifier>
        <type>
            <coding>
                <system value="http://snomed.info/sct" />
                <code value="706067003" />
                <display value="Blood collection/transfer device (physical object)" />
            </coding>
        </type>
        <specimenQuantity>
            <value value="2.5" />
            <system value="http://unitsofmeasure.org" />
            <code value="mL" />
        </specimenQuantity>
    </container>
    <condition>
        <coding>
            <system value="http://terminology.hl7.org/CodeSystem/v2-0493" />
            <code value="SNR" />
            <display value="Sample not received" />
        </coding>
    </condition>
</Specimen>