FHIR Genomics Implementation Guide

Notice

Important: This guidance is under active development by NHS England and content may be added or updated on a regular basis.
This Implementation Guide is currently in Draft and SHOULD NOT be used for development or active implementation without express direction from the NHS England Genomics Unit.

Specimen-BoneMarrowAspiration-Example

Example of a Specimen resource with the minimal information populated.

Specimen

id : Specimen-BoneMarrowAspiration-Example

identifier

system : urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24

value : RR81234

assigner

identifier

system : https://fhir.nhs.uk/Id/ods-organization-code

value : 696B0

accessionIdentifier

system : https://www.leedsth.nhs.uk/path

value : RR8123745

assigner

identifier

system : https://fhir.nhs.uk/Id/ods-organization-code

value : RR8

status : available

type

coding

system : http://snomed.info/sct

code : 396997002

display : Specimen from bone marrow obtained by aspiration

subject

reference : Patient/Patient-PatrickSammy-Example

receivedTime : 2023-08-29T11:00:00Z

request

reference : ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example

{
    "resourceType": "Specimen",
    "id": "Specimen-BoneMarrowAspiration-Example",
    "identifier":  [
        {
            "system": "urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24",
            "value": "RR81234",
            "assigner": {
                "identifier": {
                    "system": "https://fhir.nhs.uk/Id/ods-organization-code",
                    "value": "696B0"
                }
            }
        }
    ],
    "accessionIdentifier": {
        "system": "https://www.leedsth.nhs.uk/path",
        "value": "RR8123745",
        "assigner": {
            "identifier": {
                "system": "https://fhir.nhs.uk/Id/ods-organization-code",
                "value": "RR8"
            }
        }
    },
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "396997002",
                "display": "Specimen from bone marrow obtained by aspiration"
            }
        ]
    },
    "subject": {
        "reference": "Patient/Patient-PatrickSammy-Example"
    },
    "receivedTime": "2023-08-29T11:00:00Z",
    "request":  [
        {
            "reference": "ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example"
        }
    ]
}

<Specimen xmlns="http://hl7.org/fhir">
    <id value="Specimen-BoneMarrowAspiration-Example" />
    <identifier>
        <system value="urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24" />
        <value value="RR81234" />
        <assigner>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/ods-organization-code" />
                <value value="696B0" />
            </identifier>
        </assigner>
    </identifier>
    <accessionIdentifier>
        <system value="https://www.leedsth.nhs.uk/path" />
        <value value="RR8123745" />
        <assigner>
            <identifier>
                <system value="https://fhir.nhs.uk/Id/ods-organization-code" />
                <value value="RR8" />
            </identifier>
        </assigner>
    </accessionIdentifier>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="396997002" />
            <display value="Specimen from bone marrow obtained by aspiration" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/Patient-PatrickSammy-Example" />
    </subject>
    <receivedTime value="2023-08-29T11:00:00Z" />
    <request>
        <reference value="ServiceRequest-NonWGSTestOrderForm-HaemOncology-Example" />
    </request>
</Specimen>

Notice

Specimen-BoneMarrowAspiration-Example

Propose a change to Specimen-BoneMarrowAspiration-Example