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<StructureDefinition xmlns="http://hl7.org/fhir">
  <id value="logicalmodel-Genomicdeletion-insertionvariant-R4" />
  <url value="http://linkehr.com/fhir/logicalmodel-genomicdeletion-insertionvariant-R4" />
  <identifier>
    <system value="openEHR-CKM" />
    <value value="openEHR-EHR-CLUSTER.genomic_deletion_insertion_variant.v1" />
  </identifier>
  <version value="0" />
  <name value="Genomicdeletion-insertionvariant" />
  <title value="Genomic deletion-insertion variant" />
  <status value="draft" />
  <date value="2024-06-18" />
  <publisher value="openEHR" />
  <contact>
    <telecom>
      <system value="url" />
      <value value="http://www.veratech.es" />
    </telecom>
  </contact>
  <description value="A human genetic sequence change where, compared to a genomic reference sequence, one or more nucleotides are replaced by one or more other nucleotides and which is not a substitution, inversion or conversion." />
  <purpose value="To record the details about a deletion-insertion variant of human DNA, observed in a genomic sequence." />
  <fhirVersion value="4.0.0" />
  <mapping>
    <identity value="openEHR" />
    <uri value="http://openehr.org" />
    <name value="openEHR Mapping" />
  </mapping>
  <mapping>
    <identity value="openEHR-natural" />
    <uri value="http://openehr.org" />
    <name value="openEHR natural path" />
  </mapping>
  <kind value="logical" />
  <abstract value="false" />
  <type value="StructureDefinition" />
  <baseDefinition value="http://hl7.org/fhir/StructureDefinition/Element" />
  <snapshot>
    <element id="Genomic_deletion_insertion_variant">
      <path value="Genomic_deletion_insertion_variant" />
      <short value="Genomic deletion-insertion variant" />
      <definition value="A human genetic sequence change where, compared to a genomic reference sequence, one or more nucleotides are replaced by one or more other nucleotides and which is not a substitution, inversion or conversion." />
      <min value="1" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant" />
        <min value="1" />
        <max value="1" />
      </base>
      <type>
        <code value="BackboneElement" />
      </type>
      <mustSupport value="true" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
    <element id="Genomic_deletion_insertion_variant.Start_position">
      <path value="Genomic_deletion_insertion_variant.Start_position" />
      <short value="Start position" />
      <definition value="Position of the deleted nucleotide or the first nucleotide of the deleted range." />
      <min value="1" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Start_position" />
        <min value="1" />
        <max value="1" />
      </base>
    </element>
    <element id="Genomic_deletion_insertion_variant.Start_position.value">
      <path value="Genomic_deletion_insertion_variant.Start_position.value" />
      <short value="Start position" />
      <definition value="Position of the deleted nucleotide or the first nucleotide of the deleted range." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Start_position.value" />
        <min value="0" />
        <max value="1" />
      </base>
      <type>
        <code value="Quantity" />
      </type>
      <mustSupport value="false" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
    <element id="Genomic_deletion_insertion_variant.End_position">
      <path value="Genomic_deletion_insertion_variant.End_position" />
      <short value="End position" />
      <definition value="Position of the last nucleotide of the deleted range." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.End_position" />
        <min value="0" />
        <max value="1" />
      </base>
    </element>
    <element id="Genomic_deletion_insertion_variant.End_position.value">
      <path value="Genomic_deletion_insertion_variant.End_position.value" />
      <short value="End position" />
      <definition value="Position of the last nucleotide of the deleted range." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.End_position.value" />
        <min value="0" />
        <max value="1" />
      </base>
      <type>
        <code value="Quantity" />
      </type>
      <mustSupport value="false" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
    <element id="Genomic_deletion_insertion_variant.Deleted_sequence">
      <path value="Genomic_deletion_insertion_variant.Deleted_sequence" />
      <short value="Deleted sequence" />
      <definition value="The deleted nucleotide or sequence." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Deleted_sequence" />
        <min value="0" />
        <max value="1" />
      </base>
    </element>
    <element id="Genomic_deletion_insertion_variant.Deleted_sequence.value">
      <path value="Genomic_deletion_insertion_variant.Deleted_sequence.value" />
      <short value="Deleted sequence" />
      <definition value="The deleted nucleotide or sequence." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Deleted_sequence.value" />
        <min value="0" />
        <max value="1" />
      </base>
      <type>
        <code value="CodeableConcept" />
      </type>
      <mustSupport value="false" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
    <element id="Genomic_deletion_insertion_variant.Inserted_sequence">
      <path value="Genomic_deletion_insertion_variant.Inserted_sequence" />
      <short value="Inserted sequence" />
      <definition value="The inserted nucleotide or sequence." />
      <min value="1" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Inserted_sequence" />
        <min value="1" />
        <max value="1" />
      </base>
    </element>
    <element id="Genomic_deletion_insertion_variant.Inserted_sequence.value">
      <path value="Genomic_deletion_insertion_variant.Inserted_sequence.value" />
      <short value="Inserted sequence" />
      <definition value="The inserted nucleotide or sequence." />
      <min value="0" />
      <max value="1" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Inserted_sequence.value" />
        <min value="0" />
        <max value="1" />
      </base>
      <type>
        <code value="CodeableConcept" />
      </type>
      <mustSupport value="false" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
    <element id="Genomic_deletion_insertion_variant.Reference_sequence">
      <path value="Genomic_deletion_insertion_variant.Reference_sequence" />
      <short value="Reference sequence" />
      <definition value="The sequence file used as a reference to describe this variant." />
      <min value="0" />
      <max value="*" />
      <base>
        <path value="Genomic_deletion_insertion_variant.Reference_sequence" />
        <min value="0" />
        <max value="*" />
      </base>
      <type>
        <code value="BackboneElement" />
      </type>
      <mustSupport value="false" />
      <isModifier value="false" />
      <isSummary value="true" />
    </element>
  </snapshot>
</StructureDefinition>

name : Genomicdeletion-insertionvariant

{

}

<name value="Genomicdeletion-insertionvariant" />