<ConceptMap xmlns="http://hl7.org/fhir">
  <id value="genomics-samplepreparation" />
  <url value="https://fhir.nhs.uk/ConceptMap/genomics-samplepreparation" />
  <version value="0.1.0" />
  <name value="GenomicsSamplePreparation" />
  <title value="Genomics Sample Preparation" />
  <status value="draft" />
  <date value="2025-09-05T11:00:00.000Z" />
  <publisher value="NHS England" />
  <contact>
    <name value="NHS England" />
    <telecom>
      <system value="email" />
      <value value="interoperabilityteam@nhs.net" />
    </telecom>
  </contact>
  <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." />
  <purpose value="ConceptMap used for the translation and recording the concepts on method of sample preparation. This is intended for the element Specimen.processing.procedure" />
  <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \&quot;License\&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \&quot;AS IS\&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
  <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%2071388002%20" />
  <group>
    <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" />
    <target value="http://snomed.info/sct" />
    <element>
      <code value="CD138+" />
      <display value="CD138+" />
      <target>
        <code value="798001000000102" />
        <display value="CD138 count" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="CD15+" />
      <display value="CD15+" />
      <target>
        <code value="785421000000106" />
        <display value="CD15 count" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="CD19+" />
      <display value="CD19+" />
      <target>
        <code value="408228002" />
        <display value="Absolute CD19 count" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="CD3+" />
      <display value="CD3+" />
      <target>
        <code value="313447006" />
        <display value="Absolute CD3 count procedure" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="CD34+" />
      <display value="CD34+" />
      <target>
        <code value="313505009" />
        <display value="CD34 stem cell count procedure" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="CD5+" />
      <display value="CD5+" />
      <target>
        <code value="413790005" />
        <display value="CD5 count" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="DNA" />
      <display value="DNA" />
      <target>
        <code value="702943006" />
        <display value="DNA extraction" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="microdissection" />
      <display value="Microdissection" />
      <target>
        <code value="787995009" />
        <display value="Microdissection of tissue specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="other" />
      <display value="Other" />
      <target>
        <code value="71388002" />
        <display value="Procedure" />
        <equivalence value="wider" />
        <comment value="Any other suitable procedure that is an alternative to the concepts provided in this code. This should be provided by free text." />
      </target>
    </element>
    <element>
      <code value="plasma" />
      <display value="Plasma" />
      <target>
        <code value="407663004" />
        <display value="Percentage plasma cell count" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="RNA" />
      <display value="RNA" />
      <target>
        <code value="702944000" />
        <display value="RNA extraction" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="white-cells" />
      <display value="White Cells" />
      <target>
        <code value="302560003" />
        <display value="Determination of percentage differential white blood cells" />
        <equivalence value="equivalent" />
      </target>
    </element>
  </group>
</ConceptMap>