<ConceptMap xmlns="http://hl7.org/fhir">
  <id value="genomics-primarysample" />
  <url value="https://fhir.nhs.uk/ConceptMap/genomics-primarysample" />
  <version value="0.1.0" />
  <name value="GenomicsPrimarySample" />
  <title value="Genomics Primary Sample" />
  <status value="draft" />
  <date value="2025-09-05T11:00:00.000Z" />
  <publisher value="NHS England" />
  <contact>
    <name value="NHS England" />
    <telecom>
      <system value="email" />
      <value value="interoperabilityteam@nhs.net" />
    </telecom>
  </contact>
  <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." />
  <purpose value="ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type" />
  <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \&quot;License\&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \&quot;AS IS\&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
  <targetUri value="http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20" />
  <group>
    <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" />
    <target value="http://snomed.info/sct" />
    <element>
      <code value="amniotic-fluid" />
      <display value="Amniotic Fluid" />
      <target>
        <code value="119373006" />
        <display value="Amniotic fluid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="blood" />
      <display value="Blood" />
      <target>
        <code value="119297000" />
        <display value="Blood specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="bone-marrow-trephine" />
      <display value="Bone Marrow Trephine" />
      <target>
        <code value="258585008" />
        <display value="Bone marrow trephine specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="bone-marrrow-aspirate" />
      <display value="Bone Marrrow Aspirate" />
      <target>
        <code value="396997002" />
        <display value="Specimen from bone marrow obtained by aspiration" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="buccals-smear" />
      <display value="Buccals Smear" />
      <target>
        <code value="258564008" />
        <display value="Buccal smear specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="cerebrospinal-fluid" />
      <display value="Cerebrospinal Fluid" />
      <target>
        <code value="258450006" />
        <display value="Cerebrospinal fluid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="cord-blood" />
      <display value="Cord Blood" />
      <target>
        <code value="122556008" />
        <display value="Cord blood specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="chorionic-villus-sampling" />
      <display value="Chorionic Villus Sampling" />
      <target>
        <code value="258565009" />
        <display value="Chorionic villi specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="fetal-blood" />
      <display value="Fetal Blood" />
      <target>
        <code value="737357006" />
        <display value="Fetal blood specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="fibroblasts" />
      <display value="Fibroblasts" />
      <target>
        <code value="119333000" />
        <display value="Fibroblast specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="heart" />
      <display value="Heart" />
      <target>
        <code value="127462005" />
        <display value="Specimen from heart" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="kidney" />
      <display value="Kidney" />
      <target>
        <code value="127473003" />
        <display value="Specimen from kidney" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="liver" />
      <display value="Liver" />
      <target>
        <code value="119383005" />
        <display value="Specimen from liver" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="lymph-node" />
      <display value="Lymph Node" />
      <target>
        <code value="258589002" />
        <display value="Lymph node specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="other" />
      <display value="Other" />
      <target>
        <code value="123038009" />
        <display value="Specimen" />
        <equivalence value="wider" />
        <comment value="Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." />
      </target>
    </element>
    <element>
      <code value="pericardial" />
      <display value="Pericardial" />
      <target>
        <code value="122571007" />
        <display value="Pericardial fluid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="peritoneal" />
      <display value="Peritoneal" />
      <target>
        <code value="430250001" />
        <display value="Specimen from peritoneum" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="pleural-fluid" />
      <display value="Pleural Fluid" />
      <target>
        <code value="418564007" />
        <display value="Pleural fluid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="products of conception" />
      <display value="Products Of Conception" />
      <target>
        <code value="258428005" />
        <display value="Products of conception tissue specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="saliva" />
      <display value="Saliva" />
      <target>
        <code value="119342007" />
        <display value="Saliva specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="skeletal muscle" />
      <display value="Skeletal Muscle" />
      <target>
        <code value="119331003" />
        <display value="Skeletal muscle specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="skin" />
      <display value="Skin" />
      <target>
        <code value="608969007" />
        <display value="Specimen from skin" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="spleen" />
      <display value="Spleen" />
      <target>
        <code value="433308004" />
        <display value="Specimen from spleen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="tumour" />
      <display value="Tumour" />
      <target>
        <code value="258435002" />
        <display value="Tumor tissue specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="urine" />
      <display value="Urine" />
      <target>
        <code value="122575003" />
        <display value="Urine specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
  </group>
</ConceptMap>