<ConceptMap xmlns="http://hl7.org/fhir">
  <id value="genomics-finalsample" />
  <url value="https://fhir.nhs.uk/ConceptMap/genomics-finalsample" />
  <version value="0.1.0" />
  <name value="GenomicsFinalSample" />
  <title value="Genomics Final Sample" />
  <status value="draft" />
  <date value="2025-09-05T11:00:00.000Z" />
  <publisher value="NHS England" />
  <contact>
    <name value="NHS England" />
    <telecom>
      <system value="email" />
      <value value="interoperabilityteam@nhs.net" />
    </telecom>
  </contact>
  <description value="A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec." />
  <purpose value="ConceptMap used for the translation and recording of concepts for the categories of final sample types.This is intended for the element Specimen.type" />
  <copyright value="Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \&quot;License\&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \&quot;AS IS\&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html." />
  <group>
    <source value="https://future.nhs.uk/NHSgenomics/view?objectId=222250117" />
    <target value="http://snomed.info/sct" />
    <element>
      <code value="DNA" />
      <display value="DNA" />
      <target>
        <code value="258566005" />
        <display value="Deoxyribonucleic acid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="RNA" />
      <display value="RNA" />
      <target>
        <code value="441673008" />
        <display value="Ribonucleic acid specimen" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="cDNA" />
      <display value="cDNA" />
      <target>
        <code value="70016006" />
        <display value="Complementary deoxyribonucleic acid" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="ctDNA" />
      <display value="ctDNA" />
      <target>
        <equivalence value="unmatched" />
        <comment value="No suitable SNOMED CT code is found for this concept at this time. Thus, this concept should be recored under Specimen.type as free text as Circulating Tumour DNA" />
      </target>
    </element>
    <element>
      <code value="cfDNA" />
      <display value="cfDNA" />
      <target>
        <code value="70016006" />
        <display value="Cell free deoxyribonucleic acid" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="cell-suspension" />
      <display value="Cell Suspension" />
      <target>
        <code value="702451000" />
        <display value="Cultured cells" />
        <equivalence value="equivalent" />
      </target>
    </element>
    <element>
      <code value="fixed-tissue-on-slide" />
      <display value="Fixed Tissue on Slide" />
      <target>
        <code value="787150001" />
        <display value="Stained slide of tissue section" />
        <equivalence value="narrower" />
        <comment value="An appropriate concept should be selected to indicate either stained or unstained." />
      </target>
      <target>
        <code value="787149001" />
        <display value="Unstained slide of tissue section" />
        <equivalence value="narrower" />
        <comment value="An appropriate concept should be selected to indicate either stained or unstained." />
      </target>
    </element>
    <element>
      <code value="other" />
      <display value="Other" />
      <target>
        <code value="123038009" />
        <display value="Specimen" />
        <equivalence value="wider" />
        <comment value="Any other suitable Specimen types not listed on this code. This should be provided by free text if no suitable SNOMED CT is found." />
      </target>
    </element>
  </group>
</ConceptMap>