<status value="draft" /> <publisher value="NFDI4Health" /> <contact> <telecom> <system value="url" /> <value value="https://www.nfdi4health.de" /> </telecom> </contact> <description value="Extension informing about data sources from which data are generated or extracted." /> <fhirVersion value="4.0.1" /> <mapping> <identity value="rim" /> <uri value="http://hl7.org/v3" /> <name value="RIM Mapping" /> </mapping> <mapping> <identity value="NFDI4Health" /> <name value="NFDI4Health to FHIR Mapping" /> </mapping> <kind value="complex-type" /> <abstract value="false" /> <context> <type value="element" /> <expression value="ResearchStudy" /> </context> <context> <type value="element" /> <expression value="Library" /> </context> <type value="Extension" /> <baseDefinition value="http://hl7.org/fhir/StructureDefinition/Extension" /> <derivation value="constraint" /> <differential> <element id="Extension"> <path value="Extension" /> <short value="Data sources of the [RESOURCE]" /> <definition value="Group of items providing information about data sources from which the data of the [RESOURCE] are generated or extracted." /> <max value="1" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource" /> </mapping> </element> <element id="Extension.extension:general"> <path value="Extension.extension" /> <sliceName value="general" /> <short value="Type(s) of data sources" /> <definition value="Different types of data sources from which the data of the [RESOURCE] are generated or extracted." /> <comment value="Short input help: Select all that apply." /> <min value="0" /> <max value="*" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource.general" /> </mapping> </element> <element id="Extension.extension:general.extension"> <path value="Extension.extension.extension" /> <max value="0" /> </element> <element id="Extension.extension:general.url"> <path value="Extension.extension.url" /> <fixedUri value="general" /> </element> <element id="Extension.extension:general.value[x]"> <path value="Extension.extension.value[x]" /> <min value="1" /> <type> <code value="Coding" /> </type> <binding> <strength value="required" /> <description value="Value set defining codes to specify the general data sources." /> <valueSet value="https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-general-nci-local" /> </binding> </element> <element id="Extension.extension:general.value[x].system"> <path value="Extension.extension.value[x].system" /> <min value="1" /> </element> <element id="Extension.extension:general.value[x].code"> <path value="Extension.extension.value[x].code" /> <min value="1" /> </element> <element id="Extension.extension:biosamples"> <path value="Extension.extension" /> <sliceName value="biosamples" /> <short value="Biosamples collected" /> <definition value="Specification of biosamples collected in the [RESOURCE]." /> <comment value="Short input help: Select all that apply. Cardinality 0..*, if Design.dataSource.general == 'Biological samples'; otherwise 0..0" /> <min value="0" /> <max value="*" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource.biosamples" /> </mapping> </element> <element id="Extension.extension:biosamples.extension"> <path value="Extension.extension.extension" /> <max value="0" /> </element> <element id="Extension.extension:biosamples.url"> <path value="Extension.extension.url" /> <fixedUri value="biosamples" /> </element> <element id="Extension.extension:biosamples.value[x]"> <path value="Extension.extension.value[x]" /> <min value="1" /> <type> <code value="Coding" /> </type> <binding> <strength value="required" /> <description value="Value set defining codes to specify a biosample data source." /> <valueSet value="https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-ds-biosamples-sct-nci" /> </binding> </element> <element id="Extension.extension:biosamples.value[x].system"> <path value="Extension.extension.value[x].system" /> <min value="1" /> </element> <element id="Extension.extension:biosamples.value[x].code"> <path value="Extension.extension.value[x].code" /> <min value="1" /> </element> <element id="Extension.extension:imaging"> <path value="Extension.extension" /> <sliceName value="imaging" /> <short value="Imaging data collected" /> <definition value="Specification of imaging data collected in the [RESOURCE]." /> <comment value="Short input help: Select all that apply. Cardinality 0..*, if Design.dataSource.general == 'Imaging data'; otherwise 0..0" /> <min value="0" /> <max value="*" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource.imaging" /> </mapping> </element> <element id="Extension.extension:imaging.extension"> <path value="Extension.extension.extension" /> <max value="0" /> </element> <element id="Extension.extension:imaging.url"> <path value="Extension.extension.url" /> <fixedUri value="imaging" /> </element> <element id="Extension.extension:imaging.value[x]"> <path value="Extension.extension.value[x]" /> <min value="1" /> <type> <code value="Coding" /> </type> <binding> <strength value="required" /> <description value="Value set defining codes to specify an imaging data source." /> <valueSet value="https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-imaging-nci" /> </binding> </element> <element id="Extension.extension:imaging.value[x].system"> <path value="Extension.extension.value[x].system" /> <min value="1" /> </element> <element id="Extension.extension:imaging.value[x].code"> <path value="Extension.extension.value[x].code" /> <min value="1" /> </element> <element id="Extension.extension:omics"> <path value="Extension.extension" /> <sliceName value="omics" /> <short value="Omics technology used" /> <definition value="Specification of omics technology applied in the [RESOURCE]." /> <comment value="Short input help: Select all that apply." /> <min value="0" /> <max value="*" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource.omics" /> </mapping> </element> <element id="Extension.extension:omics.extension"> <path value="Extension.extension.extension" /> <max value="0" /> </element> <element id="Extension.extension:omics.url"> <path value="Extension.extension.url" /> <fixedUri value="omics" /> </element> <element id="Extension.extension:omics.value[x]"> <path value="Extension.extension.value[x]" /> <min value="1" /> <type> <code value="Coding" /> </type> <binding> <strength value="required" /> <description value="NFDI4Health VS MDS Study Data Sources Omics [NCI, UMLS]" /> <valueSet value="https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-omics-nci" /> </binding> </element> <element id="Extension.extension:omics.value[x].system"> <path value="Extension.extension.value[x].system" /> <min value="1" /> </element> <element id="Extension.extension:omics.value[x].code"> <path value="Extension.extension.value[x].code" /> <min value="1" /> </element> <element id="Extension.extension:description"> <path value="Extension.extension" /> <sliceName value="description" /> <short value="Additional information about data sources" /> <definition value="If needed, additional descriptive information about the data sources of the [RESOURCE], e.g. indication of the data source(s) not listed in the field 'Type(s) of data sources' or a more detailed description of the selected data sources." /> <comment value="Short input help: You can indicate here other data source(s) not listed in the field 'Type(s) of data sources' or provide a more detailed description of the selected data sources." /> <min value="0" /> <max value="1" /> <mapping> <identity value="NFDI4Health" /> <map value="Design.dataSource.description" /> </mapping> </element> <element id="Extension.extension:description.extension"> <path value="Extension.extension.extension" /> <max value="0" /> </element> <element id="Extension.extension:description.url"> <path value="Extension.extension.url" /> <fixedUri value="description" /> </element> <element id="Extension.extension:description.value[x]"> <path value="Extension.extension.value[x]" /> <type> <code value="string" /> </type> </element> <element id="Extension.url"> <path value="Extension.url" /> <fixedUri value="https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-data-source" /> </element> <element id="Extension.value[x]"> <path value="Extension.value[x]" /> <max value="0" /> </element> </differential> </StructureDefinition>