<status value="active" /> <description value="Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array" /> <fhirVersion value="4.0.1" /> <kind value="logical" /> <abstract value="false" /> <type value="https://dnpm-dip.net/fhir/StructureDefinition/dnpm-lm-ngs-report" /> <baseDefinition value="http://hl7.org/fhir/StructureDefinition/Element" /> <derivation value="specialization" /> <differential> <element id="dnpm-lm-ngs-report"> <path value="dnpm-lm-ngs-report" /> <short value="DNPM NGS Report" /> <definition value="Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array" /> </element> <element id="dnpm-lm-ngs-report.dnpmId"> <path value="dnpm-lm-ngs-report.dnpmId" /> <short value="NGS Report UUID (DNPM internal ID)" /> <definition value="NGS Report UUID (DNPM internal ID)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.patient"> <path value="dnpm-lm-ngs-report.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.patient.id"> <path value="dnpm-lm-ngs-report.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.patient.type"> <path value="dnpm-lm-ngs-report.patient.type" /> <short value="Reference type (Patient)" /> <definition value="Reference type (Patient)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.specimen"> <path value="dnpm-lm-ngs-report.specimen" /> <short value="Tumor specimen reference" /> <definition value="Tumor specimen reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.specimen.id"> <path value="dnpm-lm-ngs-report.specimen.id" /> <short value="Specimen ID" /> <definition value="Specimen ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.specimen.type"> <path value="dnpm-lm-ngs-report.specimen.type" /> <short value="Reference type (TumorSpecimen)" /> <definition value="Reference type (TumorSpecimen)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.issuedOn"> <path value="dnpm-lm-ngs-report.issuedOn" /> <short value="Report issue date (YYYY-MM-DD)" /> <definition value="Report issue date (YYYY-MM-DD)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.type"> <path value="dnpm-lm-ngs-report.type" /> <short value="NGS analysis type (e.g. exome, panel)" /> <definition value="NGS analysis type (e.g. exome, panel)" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.type.code"> <path value="dnpm-lm-ngs-report.type.code" /> <short value="Type code" /> <definition value="Type code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.type.display"> <path value="dnpm-lm-ngs-report.type.display" /> <short value="Type display" /> <definition value="Type display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.type.system"> <path value="dnpm-lm-ngs-report.type.system" /> <short value="Type system URI" /> <definition value="Type system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata"> <path value="dnpm-lm-ngs-report.metadata" /> <short value="NGS run metadata" /> <definition value="NGS run metadata" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.referenceGenome"> <path value="dnpm-lm-ngs-report.metadata.referenceGenome" /> <short value="Reference genome used" /> <definition value="Reference genome used" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.referenceGenome.code"> <path value="dnpm-lm-ngs-report.metadata.referenceGenome.code" /> <short value="Genome build code (e.g. GRCh38)" /> <definition value="Genome build code (e.g. GRCh38)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.referenceGenome.display"> <path value="dnpm-lm-ngs-report.metadata.referenceGenome.display" /> <short value="Genome build display" /> <definition value="Genome build display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.referenceGenome.system"> <path value="dnpm-lm-ngs-report.metadata.referenceGenome.system" /> <short value="Genome build system URI" /> <definition value="Genome build system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.sequencer"> <path value="dnpm-lm-ngs-report.metadata.sequencer" /> <short value="Sequencer instrument" /> <definition value="Sequencer instrument" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.sequencer.code"> <path value="dnpm-lm-ngs-report.metadata.sequencer.code" /> <short value="Sequencer code" /> <definition value="Sequencer code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.sequencer.display"> <path value="dnpm-lm-ngs-report.metadata.sequencer.display" /> <short value="Sequencer display" /> <definition value="Sequencer display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.sequencer.system"> <path value="dnpm-lm-ngs-report.metadata.sequencer.system" /> <short value="Sequencer system URI" /> <definition value="Sequencer system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.kitManufacturer"> <path value="dnpm-lm-ngs-report.metadata.kitManufacturer" /> <short value="Kit manufacturer name" /> <definition value="Kit manufacturer name" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.kitType"> <path value="dnpm-lm-ngs-report.metadata.kitType" /> <short value="Kit type name" /> <definition value="Kit type name" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.pipeline"> <path value="dnpm-lm-ngs-report.metadata.pipeline" /> <short value="Bioinformatics pipeline identifier" /> <definition value="Bioinformatics pipeline identifier" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent" /> <short value="Tumor cell content metadata estimate" /> <definition value="Tumor cell content metadata estimate" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent.method"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent.method" /> <short value="Estimation method" /> <definition value="Estimation method" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent.method.code"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent.method.code" /> <short value="Method code" /> <definition value="Method code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent.method.display"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent.method.display" /> <short value="Method display" /> <definition value="Method display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent.method.system"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent.method.system" /> <short value="Method system URI" /> <definition value="Method system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.metadata.tumorCellContent.value"> <path value="dnpm-lm-ngs-report.metadata.tumorCellContent.value" /> <short value="Tumor cell content fraction (0.0 – 1.0)" /> <definition value="Tumor cell content fraction (0.0 – 1.0)" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results"> <path value="dnpm-lm-ngs-report.results" /> <short value="NGS analysis results" /> <definition value="NGS analysis results" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent"> <path value="dnpm-lm-ngs-report.results.tumorCellContent" /> <short value="Bioinformatically determined tumor cell content" /> <definition value="Bioinformatically determined tumor cell content" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.id"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.id" /> <short value="Result ID" /> <definition value="Result ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.patient"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.patient.id"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.patient.type"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.patient.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.specimen"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.specimen" /> <short value="Specimen reference" /> <definition value="Specimen reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.specimen.id"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.specimen.id" /> <short value="Specimen ID" /> <definition value="Specimen ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.specimen.type"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.specimen.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.method"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.method" /> <short value="Determination method" /> <definition value="Determination method" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.method.code"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.method.code" /> <short value="Method code" /> <definition value="Method code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.method.display"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.method.display" /> <short value="Method display" /> <definition value="Method display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.method.system"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.method.system" /> <short value="Method system URI" /> <definition value="Method system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tumorCellContent.value"> <path value="dnpm-lm-ngs-report.results.tumorCellContent.value" /> <short value="Tumor cell content fraction (0.0 – 1.0)" /> <definition value="Tumor cell content fraction (0.0 – 1.0)" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb"> <path value="dnpm-lm-ngs-report.results.tmb" /> <short value="Tumor Mutational Burden" /> <definition value="Tumor Mutational Burden" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.id"> <path value="dnpm-lm-ngs-report.results.tmb.id" /> <short value="TMB result ID" /> <definition value="TMB result ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.patient"> <path value="dnpm-lm-ngs-report.results.tmb.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.patient.id"> <path value="dnpm-lm-ngs-report.results.tmb.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.patient.type"> <path value="dnpm-lm-ngs-report.results.tmb.patient.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.specimen"> <path value="dnpm-lm-ngs-report.results.tmb.specimen" /> <short value="Specimen reference" /> <definition value="Specimen reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.specimen.id"> <path value="dnpm-lm-ngs-report.results.tmb.specimen.id" /> <short value="Specimen ID" /> <definition value="Specimen ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.specimen.type"> <path value="dnpm-lm-ngs-report.results.tmb.specimen.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.value"> <path value="dnpm-lm-ngs-report.results.tmb.value" /> <short value="TMB quantity" /> <definition value="TMB quantity" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.value.value"> <path value="dnpm-lm-ngs-report.results.tmb.value.value" /> <short value="Numeric TMB value" /> <definition value="Numeric TMB value" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.value.unit"> <path value="dnpm-lm-ngs-report.results.tmb.value.unit" /> <short value="Unit (e.g. Mutations per megabase)" /> <definition value="Unit (e.g. Mutations per megabase)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.interpretation"> <path value="dnpm-lm-ngs-report.results.tmb.interpretation" /> <short value="TMB interpretation" /> <definition value="TMB interpretation" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.interpretation.code"> <path value="dnpm-lm-ngs-report.results.tmb.interpretation.code" /> <short value="Interpretation code (e.g. high)" /> <definition value="Interpretation code (e.g. high)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.interpretation.display"> <path value="dnpm-lm-ngs-report.results.tmb.interpretation.display" /> <short value="Interpretation display" /> <definition value="Interpretation display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.tmb.interpretation.system"> <path value="dnpm-lm-ngs-report.results.tmb.interpretation.system" /> <short value="Interpretation system URI" /> <definition value="Interpretation system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness"> <path value="dnpm-lm-ngs-report.results.brcaness" /> <short value="BRCAness score" /> <definition value="BRCAness score" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.id"> <path value="dnpm-lm-ngs-report.results.brcaness.id" /> <short value="BRCAness result ID" /> <definition value="BRCAness result ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.patient"> <path value="dnpm-lm-ngs-report.results.brcaness.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.patient.id"> <path value="dnpm-lm-ngs-report.results.brcaness.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.patient.type"> <path value="dnpm-lm-ngs-report.results.brcaness.patient.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.specimen"> <path value="dnpm-lm-ngs-report.results.brcaness.specimen" /> <short value="Specimen reference" /> <definition value="Specimen reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.specimen.id"> <path value="dnpm-lm-ngs-report.results.brcaness.specimen.id" /> <short value="Specimen ID" /> <definition value="Specimen ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.specimen.type"> <path value="dnpm-lm-ngs-report.results.brcaness.specimen.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.value"> <path value="dnpm-lm-ngs-report.results.brcaness.value" /> <short value="BRCAness score (0.0 – 1.0)" /> <definition value="BRCAness score (0.0 – 1.0)" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.confidenceRange"> <path value="dnpm-lm-ngs-report.results.brcaness.confidenceRange" /> <short value="Confidence range" /> <definition value="Confidence range" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.confidenceRange.min"> <path value="dnpm-lm-ngs-report.results.brcaness.confidenceRange.min" /> <short value="Minimum confidence value" /> <definition value="Minimum confidence value" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.brcaness.confidenceRange.max"> <path value="dnpm-lm-ngs-report.results.brcaness.confidenceRange.max" /> <short value="Maximum confidence value" /> <definition value="Maximum confidence value" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore"> <path value="dnpm-lm-ngs-report.results.hrdScore" /> <short value="Homologous Recombination Deficiency Score" /> <definition value="Homologous Recombination Deficiency Score" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.id"> <path value="dnpm-lm-ngs-report.results.hrdScore.id" /> <short value="HRD result ID" /> <definition value="HRD result ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.patient"> <path value="dnpm-lm-ngs-report.results.hrdScore.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.patient.id"> <path value="dnpm-lm-ngs-report.results.hrdScore.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.patient.type"> <path value="dnpm-lm-ngs-report.results.hrdScore.patient.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.specimen"> <path value="dnpm-lm-ngs-report.results.hrdScore.specimen" /> <short value="Specimen reference" /> <definition value="Specimen reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.specimen.id"> <path value="dnpm-lm-ngs-report.results.hrdScore.specimen.id" /> <short value="Specimen ID" /> <definition value="Specimen ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.specimen.type"> <path value="dnpm-lm-ngs-report.results.hrdScore.specimen.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.value"> <path value="dnpm-lm-ngs-report.results.hrdScore.value" /> <short value="HRD composite score" /> <definition value="HRD composite score" /> <min value="1" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.components"> <path value="dnpm-lm-ngs-report.results.hrdScore.components" /> <short value="HRD component scores" /> <definition value="HRD component scores" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.components.lst"> <path value="dnpm-lm-ngs-report.results.hrdScore.components.lst" /> <short value="Large-scale state transitions (LST)" /> <definition value="Large-scale state transitions (LST)" /> <min value="0" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.components.loh"> <path value="dnpm-lm-ngs-report.results.hrdScore.components.loh" /> <short value="Loss of heterozygosity (LOH)" /> <definition value="Loss of heterozygosity (LOH)" /> <min value="0" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.components.tai"> <path value="dnpm-lm-ngs-report.results.hrdScore.components.tai" /> <short value="Telomeric allelic imbalance (TAI)" /> <definition value="Telomeric allelic imbalance (TAI)" /> <min value="0" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.interpretation"> <path value="dnpm-lm-ngs-report.results.hrdScore.interpretation" /> <short value="HRD interpretation" /> <definition value="HRD interpretation" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.hrdScore.interpretation.code"> <path value="dnpm-lm-ngs-report.results.hrdScore.interpretation.code" /> <short value="Interpretation code (e.g. low)" /> <definition value="Interpretation code 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<max value="*" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.id"> <path value="dnpm-lm-ngs-report.results.simpleVariants.id" /> <short value="Variant ID" /> <definition value="Variant ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.patient"> <path value="dnpm-lm-ngs-report.results.simpleVariants.patient" /> <short value="Patient reference" /> <definition value="Patient reference" /> <min value="1" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.patient.id"> <path value="dnpm-lm-ngs-report.results.simpleVariants.patient.id" /> <short value="Patient ID" /> <definition value="Patient ID" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.patient.type"> <path value="dnpm-lm-ngs-report.results.simpleVariants.patient.type" /> <short value="Reference type" /> <definition value="Reference type" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.externalIds"> <path value="dnpm-lm-ngs-report.results.simpleVariants.externalIds" /> <short value="External variant identifiers (e.g. dbSNP rs-number)" /> <definition value="External variant identifiers (e.g. dbSNP rs-number)" /> <min value="0" /> <max value="*" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.externalIds.value"> <path value="dnpm-lm-ngs-report.results.simpleVariants.externalIds.value" /> <short value="Identifier value" /> <definition value="Identifier value" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element 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value="dnpm-lm-ngs-report.results.simpleVariants.gene.code" /> <short value="HGNC gene code" /> <definition value="HGNC gene code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.gene.display"> <path value="dnpm-lm-ngs-report.results.simpleVariants.gene.display" /> <short value="Gene symbol" /> <definition value="Gene symbol" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.gene.system"> <path value="dnpm-lm-ngs-report.results.simpleVariants.gene.system" /> <short value="Gene nomenclature system URI" /> <definition value="Gene nomenclature system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.localization"> <path value="dnpm-lm-ngs-report.results.simpleVariants.localization" /> <short value="Variant localisation in gene" /> <definition value="Variant localisation in gene" /> <min value="0" /> <max value="*" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.localization.code"> <path value="dnpm-lm-ngs-report.results.simpleVariants.localization.code" /> <short value="Localisation code" /> <definition value="Localisation code" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.localization.display"> <path value="dnpm-lm-ngs-report.results.simpleVariants.localization.display" /> <short value="Localisation display" /> <definition value="Localisation display" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.localization.system"> <path value="dnpm-lm-ngs-report.results.simpleVariants.localization.system" /> <short value="Localisation system URI" /> <definition value="Localisation system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.transcriptId"> <path value="dnpm-lm-ngs-report.results.simpleVariants.transcriptId" /> <short value="Transcript identifier" /> <definition value="Transcript identifier" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value"> <path value="dnpm-lm-ngs-report.results.simpleVariants.transcriptId.value" /> <short value="Transcript ID value (e.g. ENST...)" /> <definition value="Transcript ID value (e.g. ENST...)" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system"> <path value="dnpm-lm-ngs-report.results.simpleVariants.transcriptId.system" /> <short value="Transcript system URI" /> <definition value="Transcript system URI" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.exonId"> <path value="dnpm-lm-ngs-report.results.simpleVariants.exonId" /> <short value="Exon identifier" /> <definition value="Exon identifier" /> <min value="0" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.position"> <path value="dnpm-lm-ngs-report.results.simpleVariants.position" /> <short value="Genomic position (1-based)" /> <definition value="Genomic position (1-based)" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.position.start"> <path value="dnpm-lm-ngs-report.results.simpleVariants.position.start" /> <short value="Start position" /> <definition value="Start position" /> <min value="1" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.position.end"> <path value="dnpm-lm-ngs-report.results.simpleVariants.position.end" /> <short value="End position" /> <definition value="End position" /> <min value="0" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.altAllele"> <path value="dnpm-lm-ngs-report.results.simpleVariants.altAllele" /> <short value="Alternate allele" /> <definition value="Alternate allele" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element id="dnpm-lm-ngs-report.results.simpleVariants.refAllele"> <path value="dnpm-lm-ngs-report.results.simpleVariants.refAllele" /> <short value="Reference allele" /> <definition value="Reference allele" /> <min value="1" /> <max value="1" /> <type> <code value="string" /> </type> </element> <element 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<path value="dnpm-lm-ngs-report.results.copyNumberVariants.endRange" /> <short value="End position range" /> <definition value="End position range" /> <min value="0" /> <max value="1" /> <type> <code value="BackboneElement" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.endRange.start" /> <short value="Range start" /> <definition value="Range start" /> <min value="1" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.endRange.end" /> <short value="Range end" /> <definition value="Range end" /> <min value="1" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber" /> <short value="Total copy number" /> <definition value="Total copy number" /> <min value="0" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.relativeCopyNumber" /> <short value="Relative copy number" /> <definition value="Relative copy number" /> <min value="0" /> <max value="1" /> <type> <code value="decimal" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.cnA"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.cnA" /> <short value="Copy number allele A" /> <definition value="Copy number allele A" /> <min value="0" /> <max value="1" /> <type> <code value="integer" /> </type> </element> <element id="dnpm-lm-ngs-report.results.copyNumberVariants.cnB"> <path value="dnpm-lm-ngs-report.results.copyNumberVariants.cnB" 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