{
  "resourceType": "StructureDefinition",
  "id": "dnpm-lm-ngs-report",
  "url": "https://dnpm-dip.net/fhir/StructureDefinition/dnpm-lm-ngs-report",
  "name": "DNPM_LM_NGSReport",
  "title": "DNPM NGS Report",
  "status": "active",
  "description": "Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array",
  "fhirVersion": "4.0.1",
  "kind": "logical",
  "abstract": false,
  "type": "https://dnpm-dip.net/fhir/StructureDefinition/dnpm-lm-ngs-report",
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Element",
  "derivation": "specialization",
  "differential": {
    "element": [
      {
        "id": "dnpm-lm-ngs-report",
        "path": "dnpm-lm-ngs-report",
        "short": "DNPM NGS Report",
        "definition": "Logical Model for a single entry in the DNPM DIP MTB Patient Record ngsReports array"
      },
      {
        "id": "dnpm-lm-ngs-report.dnpmId",
        "path": "dnpm-lm-ngs-report.dnpmId",
        "short": "NGS Report UUID (DNPM internal ID)",
        "definition": "NGS Report UUID (DNPM internal ID)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.patient",
        "path": "dnpm-lm-ngs-report.patient",
        "short": "Patient reference",
        "definition": "Patient reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.patient.id",
        "path": "dnpm-lm-ngs-report.patient.id",
        "short": "Patient ID",
        "definition": "Patient ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.patient.type",
        "path": "dnpm-lm-ngs-report.patient.type",
        "short": "Reference type (Patient)",
        "definition": "Reference type (Patient)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.specimen",
        "path": "dnpm-lm-ngs-report.specimen",
        "short": "Tumor specimen reference",
        "definition": "Tumor specimen reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.specimen.id",
        "path": "dnpm-lm-ngs-report.specimen.id",
        "short": "Specimen ID",
        "definition": "Specimen ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.specimen.type",
        "path": "dnpm-lm-ngs-report.specimen.type",
        "short": "Reference type (TumorSpecimen)",
        "definition": "Reference type (TumorSpecimen)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.issuedOn",
        "path": "dnpm-lm-ngs-report.issuedOn",
        "short": "Report issue date (YYYY-MM-DD)",
        "definition": "Report issue date (YYYY-MM-DD)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.type",
        "path": "dnpm-lm-ngs-report.type",
        "short": "NGS analysis type (e.g. exome, panel)",
        "definition": "NGS analysis type (e.g. exome, panel)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.type.code",
        "path": "dnpm-lm-ngs-report.type.code",
        "short": "Type code",
        "definition": "Type code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.type.display",
        "path": "dnpm-lm-ngs-report.type.display",
        "short": "Type display",
        "definition": "Type display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.type.system",
        "path": "dnpm-lm-ngs-report.type.system",
        "short": "Type system URI",
        "definition": "Type system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata",
        "path": "dnpm-lm-ngs-report.metadata",
        "short": "NGS run metadata",
        "definition": "NGS run metadata",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.referenceGenome",
        "path": "dnpm-lm-ngs-report.metadata.referenceGenome",
        "short": "Reference genome used",
        "definition": "Reference genome used",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.referenceGenome.code",
        "path": "dnpm-lm-ngs-report.metadata.referenceGenome.code",
        "short": "Genome build code (e.g. GRCh38)",
        "definition": "Genome build code (e.g. GRCh38)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.referenceGenome.display",
        "path": "dnpm-lm-ngs-report.metadata.referenceGenome.display",
        "short": "Genome build display",
        "definition": "Genome build display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.referenceGenome.system",
        "path": "dnpm-lm-ngs-report.metadata.referenceGenome.system",
        "short": "Genome build system URI",
        "definition": "Genome build system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.sequencer",
        "path": "dnpm-lm-ngs-report.metadata.sequencer",
        "short": "Sequencer instrument",
        "definition": "Sequencer instrument",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.sequencer.code",
        "path": "dnpm-lm-ngs-report.metadata.sequencer.code",
        "short": "Sequencer code",
        "definition": "Sequencer code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.sequencer.display",
        "path": "dnpm-lm-ngs-report.metadata.sequencer.display",
        "short": "Sequencer display",
        "definition": "Sequencer display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.sequencer.system",
        "path": "dnpm-lm-ngs-report.metadata.sequencer.system",
        "short": "Sequencer system URI",
        "definition": "Sequencer system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.kitManufacturer",
        "path": "dnpm-lm-ngs-report.metadata.kitManufacturer",
        "short": "Kit manufacturer name",
        "definition": "Kit manufacturer name",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.kitType",
        "path": "dnpm-lm-ngs-report.metadata.kitType",
        "short": "Kit type name",
        "definition": "Kit type name",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.pipeline",
        "path": "dnpm-lm-ngs-report.metadata.pipeline",
        "short": "Bioinformatics pipeline identifier",
        "definition": "Bioinformatics pipeline identifier",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent",
        "short": "Tumor cell content metadata estimate",
        "definition": "Tumor cell content metadata estimate",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent.method",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent.method",
        "short": "Estimation method",
        "definition": "Estimation method",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.code",
        "short": "Method code",
        "definition": "Method code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.display",
        "short": "Method display",
        "definition": "Method display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent.method.system",
        "short": "Method system URI",
        "definition": "Method system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.metadata.tumorCellContent.value",
        "path": "dnpm-lm-ngs-report.metadata.tumorCellContent.value",
        "short": "Tumor cell content fraction (0.0 – 1.0)",
        "definition": "Tumor cell content fraction (0.0 – 1.0)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "decimal"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results",
        "path": "dnpm-lm-ngs-report.results",
        "short": "NGS analysis results",
        "definition": "NGS analysis results",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent",
        "short": "Bioinformatically determined tumor cell content",
        "definition": "Bioinformatically determined tumor cell content",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.id",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.id",
        "short": "Result ID",
        "definition": "Result ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.patient",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.patient",
        "short": "Patient reference",
        "definition": "Patient reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.patient.id",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.patient.id",
        "short": "Patient ID",
        "definition": "Patient ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.patient.type",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.patient.type",
        "short": "Reference type",
        "definition": "Reference type",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.specimen",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.specimen",
        "short": "Specimen reference",
        "definition": "Specimen reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.specimen.id",
        "short": "Specimen ID",
        "definition": "Specimen ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.specimen.type",
        "short": "Reference type",
        "definition": "Reference type",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.method",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.method",
        "short": "Determination method",
        "definition": "Determination method",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.method.code",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.method.code",
        "short": "Method code",
        "definition": "Method code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.method.display",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.method.display",
        "short": "Method display",
        "definition": "Method display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.method.system",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.method.system",
        "short": "Method system URI",
        "definition": "Method system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tumorCellContent.value",
        "path": "dnpm-lm-ngs-report.results.tumorCellContent.value",
        "short": "Tumor cell content fraction (0.0 – 1.0)",
        "definition": "Tumor cell content fraction (0.0 – 1.0)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "decimal"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb",
        "path": "dnpm-lm-ngs-report.results.tmb",
        "short": "Tumor Mutational Burden",
        "definition": "Tumor Mutational Burden",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.id",
        "path": "dnpm-lm-ngs-report.results.tmb.id",
        "short": "TMB result ID",
        "definition": "TMB result ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.patient",
        "path": "dnpm-lm-ngs-report.results.tmb.patient",
        "short": "Patient reference",
        "definition": "Patient reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.patient.id",
        "path": "dnpm-lm-ngs-report.results.tmb.patient.id",
        "short": "Patient ID",
        "definition": "Patient ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.patient.type",
        "path": "dnpm-lm-ngs-report.results.tmb.patient.type",
        "short": "Reference type",
        "definition": "Reference type",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.specimen",
        "path": "dnpm-lm-ngs-report.results.tmb.specimen",
        "short": "Specimen reference",
        "definition": "Specimen reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.specimen.id",
        "path": "dnpm-lm-ngs-report.results.tmb.specimen.id",
        "short": "Specimen ID",
        "definition": "Specimen ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.specimen.type",
        "path": "dnpm-lm-ngs-report.results.tmb.specimen.type",
        "short": "Reference type",
        "definition": "Reference type",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.value",
        "path": "dnpm-lm-ngs-report.results.tmb.value",
        "short": "TMB quantity",
        "definition": "TMB quantity",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.value.value",
        "path": "dnpm-lm-ngs-report.results.tmb.value.value",
        "short": "Numeric TMB value",
        "definition": "Numeric TMB value",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "decimal"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.value.unit",
        "path": "dnpm-lm-ngs-report.results.tmb.value.unit",
        "short": "Unit (e.g. Mutations per megabase)",
        "definition": "Unit (e.g. Mutations per megabase)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.interpretation",
        "path": "dnpm-lm-ngs-report.results.tmb.interpretation",
        "short": "TMB interpretation",
        "definition": "TMB interpretation",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.interpretation.code",
        "path": "dnpm-lm-ngs-report.results.tmb.interpretation.code",
        "short": "Interpretation code (e.g. high)",
        "definition": "Interpretation code (e.g. high)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.interpretation.display",
        "path": "dnpm-lm-ngs-report.results.tmb.interpretation.display",
        "short": "Interpretation display",
        "definition": "Interpretation display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.tmb.interpretation.system",
        "path": "dnpm-lm-ngs-report.results.tmb.interpretation.system",
        "short": "Interpretation system URI",
        "definition": "Interpretation system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.brcaness",
        "path": "dnpm-lm-ngs-report.results.brcaness",
        "short": "BRCAness score",
        "definition": "BRCAness score",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.brcaness.id",
        "path": "dnpm-lm-ngs-report.results.brcaness.id",
        "short": "BRCAness result ID",
        "definition": "BRCAness result ID",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.brcaness.patient",
        "path": "dnpm-lm-ngs-report.results.brcaness.patient",
        "short": "Patient reference",
        "definition": "Patient reference",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.brcaness.patient.id",
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        "max": "1",
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            "code": "string"
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        "max": "1",
        "type": [
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            "code": "string"
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        "id": "dnpm-lm-ngs-report.results.brcaness.value",
        "path": "dnpm-lm-ngs-report.results.brcaness.value",
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        "max": "1",
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        "max": "1",
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        "id": "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min",
        "path": "dnpm-lm-ngs-report.results.brcaness.confidenceRange.min",
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        "max": "1",
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        "id": "dnpm-lm-ngs-report.results.hrdScore",
        "path": "dnpm-lm-ngs-report.results.hrdScore",
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        "max": "1",
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            "code": "BackboneElement"
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            "code": "decimal"
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        "id": "dnpm-lm-ngs-report.results.hrdScore.interpretation.code",
        "path": "dnpm-lm-ngs-report.results.hrdScore.interpretation.code",
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        "type": [
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        "max": "1",
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        "type": [
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        "type": [
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        "type": [
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        "max": "1",
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        "max": "1",
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        "id": "dnpm-lm-ngs-report.results.copyNumberVariants.totalCopyNumber",
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            "code": "integer"
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        "max": "1",
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        "max": "1",
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        "max": "1",
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        "max": "1",
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        "max": "1",
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        "max": "1",
        "type": [
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        "type": [
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        "type": [
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        "id": "dnpm-lm-ngs-report.results.rnaFusions.externalIds",
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      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.localization",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.localization",
        "short": "Fusion localisation",
        "definition": "Fusion localisation",
        "min": 0,
        "max": "*",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.localization.code",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.localization.code",
        "short": "Localisation code",
        "definition": "Localisation code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.localization.display",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.localization.display",
        "short": "Localisation display",
        "definition": "Localisation display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.localization.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.localization.system",
        "short": "Localisation system URI",
        "definition": "Localisation system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime",
        "short": "5-prime fusion partner",
        "definition": "5-prime fusion partner",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene",
        "short": "5-prime partner gene",
        "definition": "5-prime partner gene",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.code",
        "short": "HGNC gene code",
        "definition": "HGNC gene code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.display",
        "short": "Gene symbol",
        "definition": "Gene symbol",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.gene.system",
        "short": "Gene nomenclature system URI",
        "definition": "Gene nomenclature system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript",
        "short": "5-prime transcript",
        "definition": "5-prime transcript",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.value",
        "short": "Transcript ID (e.g. ENST...)",
        "definition": "Transcript ID (e.g. ENST...)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.transcript.system",
        "short": "Transcript system URI",
        "definition": "Transcript system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.exon",
        "short": "Exon identifier",
        "definition": "Exon identifier",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.position",
        "short": "Breakpoint position",
        "definition": "Breakpoint position",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "integer"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner5prime.strand",
        "short": "Strand (+ or -)",
        "definition": "Strand (+ or -)",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime",
        "short": "3-prime fusion partner",
        "definition": "3-prime fusion partner",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene",
        "short": "3-prime partner gene",
        "definition": "3-prime partner gene",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.code",
        "short": "HGNC gene code",
        "definition": "HGNC gene code",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.display",
        "short": "Gene symbol",
        "definition": "Gene symbol",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.gene.system",
        "short": "Gene nomenclature system URI",
        "definition": "Gene nomenclature system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript",
        "short": "3-prime transcript",
        "definition": "3-prime transcript",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.value",
        "short": "Transcript ID (e.g. ENST...)",
        "definition": "Transcript ID (e.g. ENST...)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.transcript.system",
        "short": "Transcript system URI",
        "definition": "Transcript system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.exon",
        "short": "Exon identifier",
        "definition": "Exon identifier",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.position",
        "short": "Breakpoint position",
        "definition": "Breakpoint position",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "integer"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.fusionPartner3prime.strand",
        "short": "Strand (+ or -)",
        "definition": "Strand (+ or -)",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.effect",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.effect",
        "short": "RNA fusion effect",
        "definition": "RNA fusion effect",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "BackboneElement"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.effect.code",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.effect.code",
        "short": "Effect code (e.g. in-frame)",
        "definition": "Effect code (e.g. in-frame)",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.effect.display",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.effect.display",
        "short": "Effect display",
        "definition": "Effect display",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.effect.system",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.effect.system",
        "short": "Effect system URI",
        "definition": "Effect system URI",
        "min": 1,
        "max": "1",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads",
        "path": "dnpm-lm-ngs-report.results.rnaFusions.reportedNumReads",
        "short": "Number of reads supporting fusion",
        "definition": "Number of reads supporting fusion",
        "min": 0,
        "max": "1",
        "type": [
          {
            "code": "integer"
          }
        ]
      }
    ]
  }
}