{ "resourceType": "StructureDefinition", "id": "path-Request.Specimen", "text": { "status": "empty", "div": "
No narrative is provided for definitional resources. A human-readable rendering can be found in the implementation guide(s) where this resource is used.
" }, "url": "http://medmij.nl/fhir/StructureDefinition/path-Request.Specimen", "name": "PathRequestSpecimen", "title": "path Request.Specimen", "status": "draft", "publisher": "MedMij", "contact": [ { "name": "MedMij", "telecom": [ { "system": "email", "value": "info@medmij.nl", "use": "work" } ] } ], "description": "Specimen that will be examined by a laboratory.", "purpose": "This Specimen resource represents the specimen-related concepts from the Request Clinical Information Model (CIM) for patient use cases in the context of Pathology.", "copyright": "Copyright and related rights waived via CC0, https://creativecommons.org/publicdomain/zero/1.0/. This does not apply to information from third parties, for example a medical terminology system. The implementer alone is responsible for identifying and obtaining any necessary licenses or authorizations to utilize third party IP in connection with the specification or otherwise.", "fhirVersion": "4.0.1", "mapping": [ { "identity": "mercurius-core-dataset-2-0", "name": "Mercurius Core Dataset 2.0" }, { "identity": "medmij-core-dataset-120-20260923", "name": "Dataset MedMij R4 Core 1.2.0 20260923" }, { "identity": "path-dataset-100-alpha3-20260923", "name": "Dataset Pathologie MedMij 1.0.0-alpha.3 20260923" } ], "kind": "resource", "abstract": false, "type": "Specimen", "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Specimen", "derivation": "constraint", "differential": { "element": [ { "id": "Specimen", "path": "Specimen", "short": "Specimen", "definition": "Specimen that will be examined by a laboratory.", "comment": "This resource is used to convey either the primary specimen or an individual sample taken from that specimen. In the latter case, the `.parent` refers to the Specimen resource corresponding to the primary specimen.", "alias": [ "Monster" ], "mapping": [ { "identity": "path-dataset-100-alpha3-20260923", "map": "path-dataelement-8", "comment": "Specimen" }, { "identity": "path-dataset-100-alpha3-20260923", "map": "path-dataelement-15", "comment": "Sample" } ] }, { "id": "Specimen.meta", "path": "Specimen.meta", "min": 1 }, { "id": "Specimen.meta.tag", "path": "Specimen.meta.tag", "slicing": { "discriminator": [ { "type": "value", "path": "$this" } ], "rules": "open" }, "min": 1 }, { "id": "Specimen.meta.tag:careType", "path": "Specimen.meta.tag", "sliceName": "careType", "slicing": { "discriminator": [ { "type": "value", "path": "$this" } ], "rules": "open" }, "short": "CareType", "definition": "The type of the healthcare provider responsible for the delivered care, or more specifically, the specialty of the department and/or health professional that delivered care. It enables patients and systems to interpret the origin and context of medical data.", "comment": "Note that the `careType` slice is a slice on `.meta.tag`, which might not be immediately clear based on the rendering.", "alias": [ "Zorgtype" ], "min": 1, "max": "*", "binding": { "strength": "required", "valueSet": "http://decor.nictiz.nl/fhir/ValueSet/2.16.840.1.113883.2.4.3.11.60.40.2.17.2.4--20200901000000" }, "mapping": [ { "identity": "medmij-core-dataset-120-20260923", "map": "medmij-core-dataelement-123", "comment": "CareType" } ] }, { "id": "Specimen.meta.tag:careType/pathology", "path": "Specimen.meta.tag", "sliceName": "careType/pathology", "comment": "Note that the `pathology` slice is a reslice of the `careType` slice, which might not be immediately clear based on the rendering.", "min": 1, "max": "1", "patternCoding": { "code": "0388", "system": "urn:oid:2.16.840.1.113883.2.4.6.7" } }, { "id": "Specimen.identifier", "path": "Specimen.identifier", "slicing": { "discriminator": [ { "type": "profile", "path": "$this" } ], "rules": "open" }, "min": 1 }, { "id": "Specimen.identifier:specimenIdentifier", "path": "Specimen.identifier", "sliceName": "specimenIdentifier", "short": "IdentificationNumber / SpecimenIdentifier / SampleIdentifier", "definition": "Identifier of the specimen.", "comment": "This element is used to convey the identifier of either the primary specimen or an individual sample taken from that specimen, based on which specimen this resource represents.\n\n * In the former case, as the specimen is always directly linked to a request in Mercurius, this identifier's value equals the RequestIdentifier value, appended with _-0_. In particular, this identifier attains a `.value` of the form _[TCSB]YY-nnnnn-0_ or _[TCSB]YY-nnnnnn-0_ (based on the laboratory the report originates from), e.g. T26-012345-0.\n * In the latter case, this identifier's value equals the RequestIdentifier value, appended with _-[SampleNumber]_. In particular, this identifier attains a `.value` of the form _[TCSB]YY-nnnnn-[SampleNumber]_ or _[TCSB]YY-nnnnnn-[SampleNumber]_ (based on the laboratory the report originates from), e.g. T26-012345-1.\n\nIn both cases, the `.system` SHALL be of the form _urn:oid:2.16.840.1.113883.2.4.3.23.3.N.1_ where _N_ is the lab number (i.e. _labid_).", "alias": [ "Identificatienummer", "MonsterIdentificatienummer", "SampleIdentificatienummer" ], "min": 1, "max": "1", "type": [ { "code": "Identifier", "profile": [ "http://medmij.nl/fhir/StructureDefinition/path-Report.ReportIdentifier" ] } ], "mapping": [ { "identity": "path-dataset-100-alpha3-20260923", "map": "path-dataelement-14", "comment": "SpecimenIdentifier" }, { "identity": "path-dataset-100-alpha3-20260923", "map": "path-dataelement-16", "comment": "SampleNumber (implicit)" } ] }, { "id": "Specimen.type", "path": "Specimen.type", "short": "SpecimenMaterial", "definition": "Type of specimen.", "comment": "The (string) value of the SpecimenMaterial concept present in the source system SHALL be translated to a SNOMED CT code using the [Palga On-line Thesaurus](https://www.palga.nl/voor-pathologen/palga-on-line-thesaurus), if possible. In any case, the original value SHALL be conveyed via `.text`.", "alias": [ "AardMateriaal" ], "min": 1, "mapping": [ { "identity": "mercurius-core-dataset-2-0", "map": "mercurius-core-rubriek-76", "comment": "aardmateriaal" } ] }, { "id": "Specimen.type.coding.system", "path": "Specimen.type.coding.system", "patternUri": "http://snomed.info/sct" }, { "id": "Specimen.type.text", "path": "Specimen.type.text", "min": 1 }, { "id": "Specimen.subject", "path": "Specimen.subject", "short": "Patient", "definition": "The patient as subject of the information.", "alias": [ "Patiënt" ], "min": 1, "type": [ { "code": "Reference", "targetProfile": [ "http://hl7.org/fhir/StructureDefinition/Patient", "http://medmij.nl/fhir/StructureDefinition/path-Patient" ] } ], "mapping": [ { "identity": "medmij-core-dataset-120-20260923", "map": "medmij-core-dataelement-116", "comment": "Patient" } ] }, { "id": "Specimen.receivedTime", "path": "Specimen.receivedTime", "short": "ReceivedDate", "definition": "Date when specimen is received at the laboratory.", "alias": [ "DatumOntvangst" ], "min": 1, "mapping": [ { "identity": "mercurius-core-dataset-2-0", "map": "mercurius-core-rubriek-80", "comment": "datumontvangst" } ] }, { "id": "Specimen.parent", "path": "Specimen.parent", "comment": "If this Specimen resource corresponds to a sample taken from the primary specimen, the latter is referenced here.", "type": [ { "code": "Reference", "targetProfile": [ "http://hl7.org/fhir/StructureDefinition/Specimen", "http://medmij.nl/fhir/StructureDefinition/path-Request.Specimen" ] } ] }, { "id": "Specimen.collection.collected[x]", "path": "Specimen.collection.collected[x]", "slicing": { "discriminator": [ { "type": "type", "path": "$this" } ], "ordered": false, "rules": "open" } }, { "id": "Specimen.collection.collected[x]:collectedDateTime", "path": "Specimen.collection.collected[x]", "sliceName": "collectedDateTime", "short": "CollectionDate", "definition": "Date when specimen is taken from patient.", "alias": [ "DatumAfname" ], "min": 0, "max": "1", "type": [ { "code": "dateTime" } ], "mapping": [ { "identity": "mercurius-core-dataset-2-0", "map": "mercurius-core-rubriek-77", "comment": "datumafname" } ] }, { "id": "Specimen.collection.method", "path": "Specimen.collection.method", "short": "CollectionMethod", "definition": "The way the specimen is collected (biopsy, resection, etc.).", "comment": "The (string) value of the CollectionMethod concept present in the source system SHALL be translated to a SNOMED CT code using the [Palga On-line Thesaurus](https://www.palga.nl/voor-pathologen/palga-on-line-thesaurus), if possible. In any case, the original value SHALL be conveyed via `.text`.", "alias": [ "Verkrijgingswijze" ], "mapping": [ { "identity": "mercurius-core-dataset-2-0", "map": "mercurius-core-rubriek-87", "comment": "verkrijgingswijze" } ] }, { "id": "Specimen.collection.method.coding.system", "path": "Specimen.collection.method.coding.system", "patternUri": "http://snomed.info/sct" }, { "id": "Specimen.collection.method.text", "path": "Specimen.collection.method.text", "min": 1 } ] } }