Name Flags Card. Type Description & Constraints doco
. . Observation 0 .. * Grouper
. . . RecommendedAction 0..* Reference(Task | ServiceRequest | MedicationRequest | RequestGroup | CarePlan | DeviceRequest | NutritionOrder | SupplyRequest) RecommendedAction
URL: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/RecommendedAction
. . . code 1..1 CodeableConcept Grouper
Required Pattern: At least the following
. . . . coding 1..* Coding Code defined by a terminology system
Fixed Value: (complex)
. . . . . system 1..1 uri Identity of the terminology system
Fixed Value: http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes
. . . . . code 1..1 code Symbol in syntax defined by the system
Fixed Value: grouper
. . . value[x] 0 .. 0
. . . hasMember 1 .. * (Slice Definition) Slice: Unordered, Open by pattern:resolve().code
. . . . hasMember:grouper-ref 0..* Reference(Grouper) Other Grouper
. . . . hasMember:overall 0..1 Reference(Overall Interpretation) Assessment of overall results
. . . . hasMember:inh-dis-path 0..* Reference(Inherited Disease Pathogenicity) Inherited Disease Pathology
. . . . hasMember:som-diagnostic 0..* Reference(Somatic Diagnostic) Somatic Diagnostic
. . . . hasMember:som-prognostic 0..* Reference(Somatic Prognostic) Somatic Prognostic
. . . . hasMember:som-predictive 0..* Reference(Somatic Predictive) Somatic Predictive
. . . . hasMember:med-metabolism 0..* Reference(Medication Metabolism) Metabolism Implication
. . . . hasMember:med-efficacy 0..* Reference(Medication Efficacy) Efficacy Implication
. . . . hasMember:med-transporter 0..* Reference(Medication Transporter)
. . . . hasMember:med-high-risk 0..* Reference(Medication High Risk) High-Risk Medication implication
. . . . hasMember:genotype 0..* Reference(Genotype) Genotype
. . . . hasMember:haplotype 0..* Reference(Haplotype) Haplotype
. . . . hasMember:variant 0..* Reference(Variant) Variant
. . . . hasMember:region-studied 0..* Reference(Region Studied)
. . . . hasMember:sequence-phase-relation 0..* Reference(Sequence Phase Reltionship)

doco Documentation for this format
<status value="draft" /> <experimental value="false" /> <date value="2017-05-20T00:00:00+00:00" /> <publisher value="HL7 Clinical Genomics WG" /> <description value="Observation-related profiles" /> <fhirVersion value="4.0.1" /> <mapping> <identity value="v2-cg-results" /> <uri value="http://unknown.org/V2-CG-Results" /> <name value="V2-CG-Results" /> </mapping> <mapping> <identity value="workflow" /> <uri value="http://hl7.org/fhir/workflow" /> <name value="Workflow Pattern" /> </mapping> <mapping> <identity value="sct-concept" /> <uri value="http://snomed.info/conceptdomain" /> <name value="SNOMED CT Concept Domain Binding" /> </mapping> <mapping> <identity value="v2" /> <uri value="http://hl7.org/v2" /> <name value="HL7 v2 Mapping" /> </mapping> <mapping> <identity value="rim" /> <uri value="http://hl7.org/v3" /> <name value="RIM Mapping" /> </mapping> <mapping> <identity value="w5" /> <uri value="http://hl7.org/fhir/fivews" /> <name value="FiveWs Pattern Mapping" /> </mapping> <mapping> <identity value="sct-attr" /> <uri value="http://snomed.org/attributebinding" /> <name value="SNOMED CT Attribute Binding" /> </mapping> <kind value="resource" /> <abstract value="false" /> <type value="Observation" /> <baseDefinition value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-base" /> <derivation value="constraint" /> <snapshot /> <differential> <element id="Observation"> <path value="Observation" /> <short value="Grouper" /> <definition value="Organizes information within a genetic report." /> <comment value="Reported when mutation analysis (sequencing or targeted mutations) is done. Equivalent SCT codes are or will be available for LA codes in this guide. More detailed interpretations are also associated with each distinct reported variant." /> <mustSupport value="false" /> </element> <element id="Observation.extension:recommended-action"> <path value="Observation.extension" /> <sliceName value="recommended-action" /> <short value="RecommendedAction" /> <min value="0" /> <max value="*" /> <type> <code value="Extension" /> <profile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/RecommendedAction" /> </type> <mustSupport value="false" /> </element> <element id="Observation.code"> <path value="Observation.code" /> <short value="Grouper" /> <min value="1" /> <max value="1" /> <type> <code value="CodeableConcept" /> </type> <patternCodeableConcept> <coding> <system value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes" /> <code value="grouper" /> </coding> </patternCodeableConcept> <mustSupport value="false" /> </element> <element id="Observation.value[x]"> <path value="Observation.value[x]" /> <min value="0" /> <max value="0" /> <mustSupport value="false" /> </element> <element id="Observation.hasMember"> <path value="Observation.hasMember" /> <slicing> <discriminator> <type value="pattern" /> <path value="resolve().code" /> </discriminator> <rules value="open" /> </slicing> <min value="1" /> <max value="*" /> <mustSupport value="false" /> </element> <element id="Observation.hasMember:grouper-ref"> <path value="Observation.hasMember" /> <sliceName value="grouper-ref" /> <short value="Other Grouper" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/grouper" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:overall"> <path value="Observation.hasMember" /> <sliceName value="overall" /> <short value="Assessment of overall results" /> <min value="0" /> <max value="1" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/overall-interpretation" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="A.8" /> </mapping> </element> <element id="Observation.hasMember:inh-dis-path"> <path value="Observation.hasMember" /> <sliceName value="inh-dis-path" /> <short value="Inherited Disease Pathology" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/inherited-disease-pathogenicity" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:som-diagnostic"> <path value="Observation.hasMember" /> <sliceName value="som-diagnostic" /> <short value="Somatic Diagnostic" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/somatic-diagnostic" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:som-prognostic"> <path value="Observation.hasMember" /> <sliceName value="som-prognostic" /> <short value="Somatic Prognostic" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/somatic-prognostic" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:som-predictive"> <path value="Observation.hasMember" /> <sliceName value="som-predictive" /> <short value="Somatic Predictive" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/somatic-predictive" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:med-metabolism"> <path value="Observation.hasMember" /> <sliceName value="med-metabolism" /> <short value="Metabolism Implication" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/medication-metabolism" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TDB" /> </mapping> </element> <element id="Observation.hasMember:med-efficacy"> <path value="Observation.hasMember" /> <sliceName value="med-efficacy" /> <short value="Efficacy Implication" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/medication-efficacy" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TDB" /> </mapping> </element> <element id="Observation.hasMember:med-transporter"> <path value="Observation.hasMember" /> <sliceName value="med-transporter" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/medication-transporter" /> </type> <mustSupport value="false" /> </element> <element id="Observation.hasMember:med-high-risk"> <path value="Observation.hasMember" /> <sliceName value="med-high-risk" /> <short value="High-Risk Medication implication" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/medication-high-risk" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TDB" /> </mapping> </element> <element id="Observation.hasMember:genotype"> <path value="Observation.hasMember" /> <sliceName value="genotype" /> <short value="Genotype" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genotype" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:haplotype"> <path value="Observation.hasMember" /> <sliceName value="haplotype" /> <short value="Haplotype" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/haplotype" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:variant"> <path value="Observation.hasMember" /> <sliceName value="variant" /> <short value="Variant" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant" /> </type> <mustSupport value="false" /> <mapping> <identity value="v2-cg-results" /> <map value="TBD" /> </mapping> </element> <element id="Observation.hasMember:region-studied"> <path value="Observation.hasMember" /> <sliceName value="region-studied" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied" /> </type> <mustSupport value="false" /> </element> <element id="Observation.hasMember:sequence-phase-relation"> <path value="Observation.hasMember" /> <sliceName value="sequence-phase-relation" /> <min value="0" /> <max value="*" /> <type> <code value="Reference" /> <targetProfile value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship" /> </type> <mustSupport value="false" /> </element> </differential> </StructureDefinition>