<StructureDefinition xmlns="http://hl7.org/fhir">
  <id value="isa-lm-study" />
  <url value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-study" />
  <version value="0.9" />
  <name value="ISA_LM_STUDY" />
  <title value="ISA LM Study" />
  <status value="active" />
  <publisher value="Berlin Institute of Health @ Charité - Core Facility Digital Medicine and Interoperability" />
  <contact>
    <telecom>
      <system value="url" />
      <value value="https://www.bihealth.org/en/research/scientific-infrastructure/core-facilities/interoperability/home" />
    </telecom>
  </contact>
  <description value="FHIR LogicalModel representing the study_schema.json as specified in ISA Model and Serialization Specifications 1.0 (2016-10-28)." />
  <fhirVersion value="4.0.1" />
  <mapping>
    <identity value="rim" />
    <uri value="http://hl7.org/v3" />
    <name value="RIM Mapping" />
  </mapping>
  <mapping>
    <identity value="FHIR" />
    <name value="Study LogicalModel FHIR Mapping" />
  </mapping>
  <kind value="logical" />
  <abstract value="false" />
  <type value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-study" />
  <baseDefinition value="http://hl7.org/fhir/StructureDefinition/Element" />
  <derivation value="specialization" />
  <differential>
    <element id="isa-lm-study">
      <path value="isa-lm-study" />
      <short value="ISA LM Study" />
      <definition value="FHIR LogicalModel representing the study_schema.json as specified in ISA Model and Serialization Specifications 1.0 (2016-10-28)." />
    </element>
    <element id="isa-lm-study.Study">
      <path value="isa-lm-study.Study" />
      <short value="Study" />
      <definition value="This schema implements Study from the ISA Abstract Model." />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="BackboneElement" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.@id">
      <path value="isa-lm-study.Study.@id" />
      <short value="@id" />
      <definition value="@id" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="uri" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.id" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.filename">
      <path value="isa-lm-study.Study.filename" />
      <short value="filename" />
      <definition value="filename" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="string" />
      </type>
    </element>
    <element id="isa-lm-study.Study.identifier">
      <path value="isa-lm-study.Study.identifier" />
      <short value="identifier" />
      <definition value="identifier" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="string" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.identifier" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.title">
      <path value="isa-lm-study.Study.title" />
      <short value="title" />
      <definition value="title" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="string" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.title" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.description">
      <path value="isa-lm-study.Study.description" />
      <short value="description" />
      <definition value="description" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="string" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.description" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.submissionDate">
      <path value="isa-lm-study.Study.submissionDate" />
      <short value="submission date" />
      <definition value="submission date" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="dateTime" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:submissionDate.valueDateTime" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.publicReleaseDate">
      <path value="isa-lm-study.Study.publicReleaseDate" />
      <short value="public release date" />
      <definition value="public release date" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="dateTime" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:publicReleaseDate.valueDateTime" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.publications">
      <path value="isa-lm-study.Study.publications" />
      <short value="publications" />
      <definition value="publications" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-publication" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.relatedArtifact" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.people">
      <path value="isa-lm-study.Study.people" />
      <short value="people" />
      <definition value="people" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-person" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.contact.extension:people.valueReference(Practitioner|PractitionerRole)" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.studyDesignDescriptors">
      <path value="isa-lm-study.Study.studyDesignDescriptors" />
      <short value="study design descriptors" />
      <definition value="study design descriptors" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-ontology-annotation" />
      </type>
    </element>
    <element id="isa-lm-study.Study.protocols">
      <path value="isa-lm-study.Study.protocols" />
      <short value="protocols" />
      <definition value="protocols" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-protocol" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.protocol" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.materials">
      <path value="isa-lm-study.Study.materials" />
      <short value="materials" />
      <definition value="materials" />
      <min value="0" />
      <max value="1" />
      <type>
        <code value="BackboneElement" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:materials" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.materials.sources">
      <path value="isa-lm-study.Study.materials.sources" />
      <short value="materials - sources" />
      <definition value="materials - sources" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-source" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:materials.extension:sources.valueReference(Specimen)" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.materials.samples">
      <path value="isa-lm-study.Study.materials.samples" />
      <short value="materials - samples" />
      <definition value="materials - samples" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-sample" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:materials.extension:samples.valueReference(Specimen)" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.materials.otherMaterials">
      <path value="isa-lm-study.Study.materials.otherMaterials" />
      <short value="materials - other materials" />
      <definition value="materials - other materials" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-material" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:materials.extension:otherMaterials.valueReference(Specimen)" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.processSequence">
      <path value="isa-lm-study.Study.processSequence" />
      <short value="process sequence" />
      <definition value="process sequence" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-process" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.protocol" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.assays">
      <path value="isa-lm-study.Study.assays" />
      <short value="assays" />
      <definition value="assays" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-assay" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:assays.valueReference(Observation)" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.factors">
      <path value="isa-lm-study.Study.factors" />
      <short value="factors" />
      <definition value="factors" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-factor" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.extension:factors" />
      </mapping>
    </element>
    <element id="isa-lm-study.Study.characteristicCategories">
      <path value="isa-lm-study.Study.characteristicCategories" />
      <short value="Characteristic Categories" />
      <definition value="List of all the characteristics categories (or material attributes) defined in the study, used to avoid duplication of their declaration when each material_attribute_value is created." />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-material-attribute" />
      </type>
    </element>
    <element id="isa-lm-study.Study.unitCategories">
      <path value="isa-lm-study.Study.unitCategories" />
      <short value="Unit Categories" />
      <definition value="List of all the unitsdefined in the study, used to avoid duplication of their declaration when each value is created." />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-ontology-annotation" />
      </type>
    </element>
    <element id="isa-lm-study.Study.comments">
      <path value="isa-lm-study.Study.comments" />
      <short value="comments" />
      <definition value="comments" />
      <min value="0" />
      <max value="*" />
      <type>
        <code value="Reference" />
        <targetProfile value="https://www.nfdi4health.de/fhir/ISA/StructureDefinition/isa-lm-comment" />
      </type>
      <mapping>
        <identity value="FHIR" />
        <map value="ResearchStudy.note" />
      </mapping>
    </element>
  </differential>
</StructureDefinition>