UK Core Implementation Guide STU3 Sequence

Please note:

This version of the UK Core is a development copy.
This contains BREAKING CHANGES as a result of the C&TA Sprint 7 Review, and STU2 Sequence ballot reconciliation.
This version is not yet reviewed for implementation. Other versions are available on the UK Core Version History Guide
Please follow the guidance on the Contact Us page if you need any assistance.
A summary of changes is available on the STU3 Sequence Change Log

An example to illustrate the use of the HL7 core-defined Extension specimen-specialHandling

Table View

Specimen.id[0]	UKCore-Extension-SpecialHandling-Example
Specimen.text[0].status[0]	additional
Specimen.text[0].div[0]	<div xmlns="http://www.w3.org/1999/xhtml">An example to illustrate the use of the HL7 core-defined Extension specimen-specialHandling</div>
Specimen.status[0]	available
Specimen.type[0].coding[0].system[0]	http://snomed.info/sct
Specimen.type[0].coding[0].code[0]	431234000
Specimen.type[0].coding[0].display[0]	Specimen from fetus obtained by biopsy
Specimen.subject[0].reference[0]	Patient/UKCore-Patient-RichardSmith-Example
Specimen.receivedTime[0]	2023-04-23T17:02:00Z
Specimen.collection[0].extension[0].url[0]	http://hl7.org/fhir/StructureDefinition/specimen-specialHandling
Specimen.collection[0].extension[0].value[0].text[0]	Mother was infected with suspected viral haemorrhagic fever.
Specimen.collection[0].collector[0].reference[0]	Practitioner/UKCore-Practitioner-ConsultantSandraGose-Example
Specimen.collection[0].collected[0]	2023-04-23T17:02:00Z
Specimen.collection[0].method[0].coding[0].system[0]	http://snomed.info/sct
Specimen.collection[0].method[0].coding[0].code[0]	129314006
Specimen.collection[0].method[0].coding[0].display[0]	Biopsy - action

Tree View

Specimen

id : UKCore-Extension-SpecialHandling-Example

text

status : additional

status : available

type

coding

system : http://snomed.info/sct

code : 431234000

display : Specimen from fetus obtained by biopsy

subject

reference : Patient/UKCore-Patient-RichardSmith-Example

receivedTime : 2023-04-23T17:02:00Z

collection

extension

url : http://hl7.org/fhir/StructureDefinition/specimen-specialHandling

value

text : Mother was infected with suspected viral haemorrhagic fever.

collector

reference : Practitioner/UKCore-Practitioner-ConsultantSandraGose-Example

collected : 2023-04-23T17:02:00Z

method

coding

system : http://snomed.info/sct

code : 129314006

display : Biopsy - action

XML View

<Specimen xmlns="http://hl7.org/fhir">
    <id value="UKCore-Extension-SpecialHandling-Example" />
    <text>
        <status value="additional" />
        --- We have skipped the narrative for better readability of the resource ---
    </text>
    <status value="available" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="431234000" />
            <display value="Specimen from fetus obtained by biopsy" />
        </coding>
    </type>
    <subject>
        <reference value="Patient/UKCore-Patient-RichardSmith-Example" />
    </subject>
    <receivedTime value="2023-04-23T17:02:00Z" />
    <collection>
        <!--  ***************extension start***************  -->
        <extension url="http://hl7.org/fhir/StructureDefinition/specimen-specialHandling">
            <valueCodeableConcept>
                <text value="Mother was infected with suspected viral haemorrhagic fever." />
            </valueCodeableConcept>
        </extension>
        <!--  **************extension end ******************  -->
        <collector>
            <reference value="Practitioner/UKCore-Practitioner-ConsultantSandraGose-Example" />
        </collector>
        <collectedDateTime value="2023-04-23T17:02:00Z" />
        <method>
            <coding>
                <system value="http://snomed.info/sct" />
                <code value="129314006" />
                <display value="Biopsy - action" />
            </coding>
        </method>
    </collection>
</Specimen>

JSON View

{
    "resourceType": "Specimen",
    "id": "UKCore-Extension-SpecialHandling-Example",
    "text": {
        "status": "additional",
        --- We have skipped the narrative for better readability of the resource ---
    },
    "status": "available",
    "type": {
        "coding":  [
            {
                "system": "http://snomed.info/sct",
                "code": "431234000",
                "display": "Specimen from fetus obtained by biopsy"
            }
        ]
    },
    "subject": {
        "reference": "Patient/UKCore-Patient-RichardSmith-Example"
    },
    "receivedTime": "2023-04-23T17:02:00Z",
    "collection": {
        "extension":  [
            {
                "url": "http://hl7.org/fhir/StructureDefinition/specimen-specialHandling",
                "valueCodeableConcept": {
                    "text": "Mother was infected with suspected viral haemorrhagic fever."
                }
            }
        ],
        "collector": {
            "reference": "Practitioner/UKCore-Practitioner-ConsultantSandraGose-Example"
        },
        "collectedDateTime": "2023-04-23T17:02:00Z",
        "method": {
            "coding":  [
                {
                    "system": "http://snomed.info/sct",
                    "code": "129314006",
                    "display": "Biopsy - action"
                }
            ]
        }
    }
}