XML View
<StructureDefinition xmlns="http://hl7.org/fhir">
<id value="Extension-UKCore-SampleCategory" />
<url value="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-SampleCategory" />
<version value="1.0.0" />
<name value="ExtensionUKCoreSampleCategory" />
<title value="Extension UK Core Sample Category" />
<status value="active" />
<date value="2023-04-28" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="ukcore@hl7.org.uk" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="An extension to record the category of genome sequencing sample." />
<purpose value="This extension is a Genomics use case to categorise the genome sequencing sample type, whether it is a tumour or germline Sample. This is different to Specimen.type which, for genomics, records the tissue of origin." />
<fhirVersion value="4.0.1" />
<kind value="complex-type" />
<abstract value="false" />
<context>
<type value="element" />
<expression value="Specimen" />
</context>
<type value="Extension" />
<baseDefinition value="http://hl7.org/fhir/StructureDefinition/Extension" />
<derivation value="constraint" />
<differential>
<element id="Extension">
<path value="Extension" />
<short value="An extension to record the category of the sample." />
<definition value="This extension allows the recording of the category of a sample for use within Genomics, whether it is a tumour or germline sample." />
</element>
<element id="Extension.url">
<path value="Extension.url" />
<fixedUri value="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-SampleCategory" />
</element>
<element id="Extension.value[x]">
<path value="Extension.value[x]" />
<short value="A set of codes to record the category of the sample" />
<min value="1" />
<type>
<code value="CodeableConcept" />
</type>
</element>
<element id="Extension.value[x].coding">
<path value="Extension.value[x].coding" />
<binding>
<strength value="preferred" />
<description value="A set of codes to record the category of the sample" />
<valueSet value="https://fhir.hl7.org.uk/ValueSet/UKCore-SampleCategory" />
</binding>
</element>
</differential>
</StructureDefinition>
JSON View
{
"resourceType": "StructureDefinition",
"id": "Extension-UKCore-SampleCategory",
"url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-SampleCategory",
"version": "1.0.0",
"name": "ExtensionUKCoreSampleCategory",
"title": "Extension UK Core Sample Category",
"status": "active",
"date": "2023-04-28",
"publisher": "HL7 UK",
"contact": [
{
"name": "HL7 UK",
"telecom": [
{
"system": "email",
"value": "ukcore@hl7.org.uk",
"use": "work",
"rank": 1
}
]
}
],
"description": "An extension to record the category of genome sequencing sample.",
"purpose": "This extension is a Genomics use case to categorise the genome sequencing sample type, whether it is a tumour or germline Sample. This is different to Specimen.type which, for genomics, records the tissue of origin.",
"fhirVersion": "4.0.1",
"kind": "complex-type",
"abstract": false,
"context": [
{
"type": "element",
"expression": "Specimen"
}
],
"type": "Extension",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Extension",
"derivation": "constraint",
"differential": {
"element": [
{
"id": "Extension",
"path": "Extension",
"short": "An extension to record the category of the sample.",
"definition": "This extension allows the recording of the category of a sample for use within Genomics, whether it is a tumour or germline sample."
},
{
"id": "Extension.url",
"path": "Extension.url",
"fixedUri": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-SampleCategory"
},
{
"id": "Extension.value[x]",
"path": "Extension.value[x]",
"short": "A set of codes to record the category of the sample",
"min": 1,
"type": [
{
"code": "CodeableConcept"
}
]
},
{
"id": "Extension.value[x].coding",
"path": "Extension.value[x].coding",
"binding": {
"strength": "preferred",
"description": "A set of codes to record the category of the sample",
"valueSet": "https://fhir.hl7.org.uk/ValueSet/UKCore-SampleCategory"
}
}
]
}
}
Examples
Sample Category- An example to illustrate the extension to show the Genomics classification of a sample.
Example UKCore-Specimen-Extension-SampleCategory
