<Bundle xmlns="http://hl7.org/fhir">
  <type value="transaction" />
  <entry>
    <fullUrl value="Procedure/temp-genomic-study-1" />
    <resource>
      <Procedure>
        <id value="temp-genomic-study-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicStudy" />
        </meta>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-ext">
          <valueReference>
            <reference value="Procedure/temp-genomic-study-analysis-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicLaboratoryProcessExtension">
          <valueReference>
            <reference value="Procedure/temp-laboratory-process-1" />
          </valueReference>
        </extension>
        <identifier>
          <type>
            <coding>
              <system value="http://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="requester-case-identifier" />
              <display value="Requester Case Identifier" />
            </coding>
          </type>
          <system value="http://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="F000XXX2" />
        </identifier>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="laboratory-case-identifier" />
              <display value="Laboratory Case Identifier" />
            </coding>
          </type>
          <system value="http://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="sealingeagle" />
        </identifier>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="405824009" />
            <display value="Genetic test (Procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="http://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust003" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
        <coding>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <code value="wgs" />
          <display value="Whole Genome Sequencing" />
        </coding>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Specimen/temp-genomic-study-analysis-1" />
    <resource>
      <Procedure>
        <id value="temp-genomic-study-analysis-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicStudyAnalysis" />
        </meta>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-specimen">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicStudyAnalysisVersion">
          <valueString value="12.1.1" />
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-title">
          <valueString value="RNA-Fusion" />
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-regions">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-bed-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="BED" />
          </extension>
          <extension url="description">
            <valueString value="OMIM-AUTO" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-input">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-input">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-2" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-input">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-3" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-vcf-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="VCF" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-cram-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="CRAM" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-cram-2" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="CRAM" />
          </extension>
        </extension>
        <extension url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-study-analysis-output">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-cram-3" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="CRAM" />
          </extension>
        </extension>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaGenomicAnalysisPedigreeExtension">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-ped-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="PEDIGREE" />
          </extension>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="118117001" />
            <display value="Gene mutation analysis (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <performedDateTime value="2024-12-02T07:45:00+00:00" />
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="http://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="ResourceName/temp-laboratory-process-1" />
    <resource>
      <Procedure>
        <id value="temp-laboratory-process-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLaboratoryProcess" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicLibraryPreperationExtension">
          <valueReference>
            <reference value="Procedure/temp-library-preparation-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingExtension">
          <valueReference>
            <reference value="Procedure/temp-gene-sequencing-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="108252007" />
            <display value="Laboratory procedure (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-library-preparation-1" />
    <resource>
      <Procedure>
        <id value="temp-library-preparation-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLibraryPreperation" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaPanelName">
          <valueString value="exome 10" />
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="56245008" />
            <display value="Specimen preparation (procedure)" />
          </coding>
        </category>
        <code>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="Watchmaker-WGS" />
            <display value="Watchmaker WGS" />
          </coding>
        </code>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-gene-sequencing-1" />
    <resource>
      <Procedure>
        <id value="temp-gene-sequencing-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencing" />
        </meta>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingResult">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-1" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingPlatformExtension">
          <valueString value="NovaSeq X" />
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingNumberOfReads">
          <valueInteger value="650000000" />
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="117040002" />
            <display value="Nucleic acid sequencing (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Patient/temp-patient-1" />
    <resource>
      <Patient>
        <id value="temp-patient-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaPatientGenomics" />
        </meta>
        <identifier>
          <use value="temp" />
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="32121" />
        </identifier>
        <gender value="female" />
      </Patient>
    </resource>
    <request>
      <method value="POST" />
      <url value="Patient" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Specimen/temp-specimen-1" />
    <resource>
      <Specimen>
        <id value="temp-specimen-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimen" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenSource">
          <valueString value="cerebrospinal fluid" />
        </extension>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="requester-sample-identifier" />
              <display value="Requester Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="2023-32121-3" />
        </identifier>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="laboratory-sample-identifier" />
              <display value="Laboratory Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="ACC32121A1" />
        </identifier>
        <type>
          <coding>
            <system value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/specimen-type" />
            <code value="RNA" />
            <display value="RNA" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
      </Specimen>
    </resource>
    <request>
      <method value="POST" />
      <url value="Specimen" />
    </request>
  </entry>
  <entry>
    <fullUrl value="ResourceName/temp-laboratory-process-2" />
    <resource>
      <Procedure>
        <id value="temp-laboratory-process-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLaboratoryProcess" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicLibraryPreperationExtension">
          <valueReference>
            <reference value="Procedure/temp-library-preparation-2" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingExtension">
          <valueReference>
            <reference value="Procedure/temp-gene-sequencing-2" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-2" />
          </valueReference>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="108252007" />
            <display value="Laboratory procedure (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust003" />
            </identifier>
            <display value="Klinisk Mikrobiologi" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-library-preparation-2" />
    <resource>
      <Procedure>
        <id value="temp-library-preparation-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLibraryPreperation" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-2" />
          </valueReference>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="56245008" />
            <display value="Specimen preparation (procedure)" />
          </coding>
        </category>
        <code>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="truseq-wgs" />
            <display value="Truseq WGS" />
          </coding>
        </code>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust003" />
            </identifier>
            <display value="Klinisk Mikrobiologi" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-gene-sequencing-2" />
    <resource>
      <Procedure>
        <id value="temp-gene-sequencing-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencing" />
        </meta>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-2" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingResult">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-2" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingPlatformExtension">
          <valueString value="PacBio Revio" />
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingNumberOfReads">
          <valueInteger value="26500000" />
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="117040002" />
            <display value="Nucleic acid sequencing (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Mikrobiologi" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Patient/temp-patient-2" />
    <resource>
      <Patient>
        <id value="temp-patient-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaPatientGenomics" />
        </meta>
        <identifier>
          <use value="temp" />
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="56789" />
        </identifier>
        <gender value="female" />
      </Patient>
    </resource>
    <request>
      <method value="POST" />
      <url value="Patient" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Specimen/temp-specimen-2" />
    <resource>
      <Specimen>
        <id value="temp-specimen-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimen" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenSource">
          <valueString value="blood" />
        </extension>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="requester-sample-identifier" />
              <display value="Requester Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="1202-72629p" />
        </identifier>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="laboratory-sample-identifier" />
              <display value="Laboratory Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="ACC56789A2" />
        </identifier>
        <type>
          <coding>
            <system value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/specimen-type" />
            <code value="RNA" />
            <display value="RNA" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
      </Specimen>
    </resource>
    <request>
      <method value="POST" />
      <url value="Specimen" />
    </request>
  </entry>
  <entry>
    <fullUrl value="ResourceName/temp-laboratory-process-3" />
    <resource>
      <Procedure>
        <id value="temp-laboratory-process-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLaboratoryProcess" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicLibraryPreperationExtension">
          <valueReference>
            <reference value="Procedure/temp-library-preparation-3" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingExtension">
          <valueReference>
            <reference value="Procedure/temp-gene-sequencing-3" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-3" />
          </valueReference>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="108252007" />
            <display value="Laboratory procedure (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-library-preparation-3" />
    <resource>
      <Procedure>
        <id value="temp-library-preparation-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaLibraryPreperation" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-3" />
          </valueReference>
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="56245008" />
            <display value="Specimen preparation (procedure)" />
          </coding>
        </category>
        <code>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="truseq-wgs" />
            <display value="TruSeq WGS" />
          </coding>
        </code>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Procedure/temp-gene-sequencing-3" />
    <resource>
      <Procedure>
        <id value="temp-gene-sequencing-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencing" />
        </meta>
        <extension url="https://karolinskafhirserver/fhir/StructureDefinition/KarolinskaFocusExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-3" />
          </valueReference>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingResult">
          <extension url="file">
            <valueReference>
              <reference value="DocumentReference/temp-fastq-3" />
            </valueReference>
          </extension>
          <extension url="type">
            <valueCode value="FASTQ" />
          </extension>
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingPlatformExtension">
          <valueString value="Oxford Nanopore Promethion" />
        </extension>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGeneSequencingNumberOfReads">
          <valueInteger value="350000000" />
        </extension>
        <status value="completed" />
        <category>
          <coding>
            <system value="http://snomed.info/sct" />
            <code value="117040002" />
            <display value="Nucleic acid sequencing (procedure)" />
          </coding>
        </category>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
        <performer>
          <actor>
            <display value="GMCK" />
          </actor>
          <onBehalfOf>
            <identifier>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <value value="Cust002" />
            </identifier>
            <display value="Klinisk Genetik" />
          </onBehalfOf>
        </performer>
      </Procedure>
    </resource>
    <request>
      <method value="POST" />
      <url value="Procedure" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Patient/temp-patient-3" />
    <resource>
      <Patient>
        <id value="temp-patient-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaPatientGenomics" />
        </meta>
        <identifier>
          <use value="temp" />
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="45656" />
        </identifier>
        <gender value="male" />
      </Patient>
    </resource>
    <request>
      <method value="POST" />
      <url value="Patient" />
    </request>
  </entry>
  <entry>
    <fullUrl value="Specimen/temp-specimen-3" />
    <resource>
      <Specimen>
        <id value="temp-specimen-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimen" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenSource">
          <valueString value="blood" />
        </extension>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="requester-sample-identifier" />
              <display value="Requester Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="op-123" />
        </identifier>
        <identifier>
          <type>
            <coding>
              <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
              <code value="laboratory-sample-identifier" />
              <display value="Laboratory Sample Identifier" />
            </coding>
          </type>
          <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
          <value value="ACC45656A3" />
        </identifier>
        <type>
          <coding>
            <system value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/specimen-type" />
            <code value="RNA" />
            <display value="RNA" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
      </Specimen>
    </resource>
    <request>
      <method value="POST" />
      <url value="Specimen" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-fastq-1" />
    <resource>
      <DocumentReference>
        <id value="temp-fastq-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="fastq" />
            <display value="FASTQ" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][FASTQ]" />
            <size value="58970" />
            <title value="fastq1-exampleName-sampleID-filetype" />
            <creation value="2024-11-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-cram-1" />
    <resource>
      <DocumentReference>
        <id value="temp-cram-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="cram" />
            <display value="CRAM" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][cram]" />
            <size value="500" />
            <title value="CRAM1-exampleName-sampleID-filetype" />
            <creation value="2024-11-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-ped-1" />
    <resource>
      <DocumentReference>
        <id value="temp-ped-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="ped" />
            <display value="PEDIGREE" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][PED]" />
            <size value="8450" />
            <title value="PED1-exampleName-sampleID-filetype" />
            <creation value="2024-11-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-vcf-1" />
    <resource>
      <DocumentReference>
        <id value="temp-vcf-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="vcf" />
            <display value="VCF" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][VCF]" />
            <size value="25277" />
            <title value="VCF1-exampleName-sampleID-filetype" />
            <creation value="2024-11-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-bed-1" />
    <resource>
      <DocumentReference>
        <id value="temp-bed-1" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-1" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="bed" />
            <display value="BED" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-1" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][BED]" />
            <size value="5000" />
            <title value="BED1-exampleName-sampleID-filetype" />
            <creation value="2024-11-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-fastq-2" />
    <resource>
      <DocumentReference>
        <id value="temp-fastq-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-2" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="fastq" />
            <display value="FASTQ" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][FASTQ]" />
            <size value="43620" />
            <title value="fastq2-exampleName-sampleID-filetype" />
            <creation value="2025-01-20T12:00:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-fastq-3" />
    <resource>
      <DocumentReference>
        <id value="temp-fastq-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-3" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="fastq" />
            <display value="FASTQ" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][FASTQ]" />
            <size value="71170" />
            <title value="fastq3-exampleName-sampleID-filetype" />
            <creation value="2025-01-19T08:35:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-cram-2" />
    <resource>
      <DocumentReference>
        <id value="temp-cram-2" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-2" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="cram" />
            <display value="CRAM" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-2" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][cram]" />
            <size value="39223" />
            <title value="CRAM2-exampleName-sampleID-filetype" />
            <creation value="2025-02-21T07:11:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
  <entry>
    <fullUrl value="DocumentReference/temp-cram-3" />
    <resource>
      <DocumentReference>
        <id value="temp-cram-3" />
        <meta>
          <profile value="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaGenomicDataFile" />
        </meta>
        <extension url="https://karolinskafhirserver.org/fhir/StructureDefinition/KarolinskaSpecimenExtension">
          <valueReference>
            <reference value="Specimen/temp-specimen-3" />
          </valueReference>
        </extension>
        <status value="current" />
        <type>
          <coding>
            <system value="https://ExampleKarolinskaBaseURL/unspecified-system" />
            <code value="cram" />
            <display value="CRAM" />
          </coding>
        </type>
        <subject>
          <reference value="Patient/temp-patient-3" />
        </subject>
        <content>
          <attachment>
            <url value="https://databaseName[example-specimen][cram]" />
            <size value="53761" />
            <title value="CRAM3-exampleName-sampleID-filetype" />
            <creation value="2025-01-20T11:15:00+00:00" />
          </attachment>
        </content>
      </DocumentReference>
    </resource>
    <request>
      <method value="POST" />
      <url value="DocumentReference" />
    </request>
  </entry>
</Bundle>